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Cationic Species (cationic + species)
Selected AbstractsHow Does DNA Compaction Favor Chiral Selectivity with Cationic Species?CHEMBIOCHEM, Issue 8 2005Higher Selectivity with Lower Cationic Charge Abstract A single-molecule study on giant DNA compaction by enantiomeric dications and tetracations demonstrates that strong chiral discrimination in DNA compaction is manifested only if the positive charge on enantiomeric multications is relatively low. The increase in cationicity of the chiral compaction agent inevitably leads to an increase in nonspecific electrostatic interactions and quenching of chiral discrimination in the DNA-folding phase transition. [source] An Electroanalytical Investigation on the Redox Properties of Calcium Antagonist DihydropyridinesELECTROANALYSIS, Issue 10 2003Rosanna Toniolo Abstract The antioxidant capacity of some calcium antagonists and one calcium agonist 1,4-dihydropyridines (DHPs) was evaluated by a competitive kinetic procedure. With the exception of Amlodipine, all the calcium antagonist DHPs display an unambiguous antioxidant capacity, while for the calcium agonist DHP (Bay K 8644) no measurable reactivity towards peroxyl radicals could be detected. The finding was corroborated by an electroanalytical investigation of the redox properties of DHPs compounds to get an insight about both the thermodynamic constraints of their oxidation process and reaction pattern. The oxidation potentials decrease with both antioxidant capacity and increasing basic character, thus suggesting the relevance of the electron density on the DHP ring. For all the compounds investigated, the overall oxidation process takes place through a primary one-electron step accompanied by a fast proton release and the formation of a neutral radical undergoing a second much easier one-electron step. The protonated form of the parent pyridine derivative is thus generated as the final product. This pattern is relevant for the antioxidant effect, since the radical intermediate is much more prone to be oxidized than to be reduced, thus fully preventing the propagation of the oxidative chain reaction. In the case of calcium antagonist DHPs, the above release of protons complicates the overall oxidation process by introducing a parasitic side reaction where a coupling between protons and the starting species takes place. This DHP self-protonation subtracts part of the original species from the electrode process because the parent cationic species is no longer electroactive. Conversely, the calcium agonist DHP, which is more difficult to be oxidized, turned out to be such a weak base as to be unable to undergo the self-protonation reaction. The combined effect of oxidation potentials and proton binding capacity of DHPs is a key element for the redox transition, which could support their antioxidant effect and should be considered to some extent in accounting for the calcium antagonist vs calcium agonist effect. [source] An Unusual Anion,, Interaction in an ;rido Organometallic Assembly: Synthesis, First Crystal Structure, and Computational StudyEUROPEAN JOURNAL OF INORGANIC CHEMISTRY, Issue 25 2009Jamal Moussa Abstract The organometallic assembly [Cp*Ir(,6 -C6H2O4)(BF2)2(CF3SO3)][Cp*Ir(,-Cl)3IrCp*] (3) was prepared from [Cp*Ir(solvent)3][OTf]2 (2) and 1,2,4,5 tetrahydroxybenzene (THB, 1) in acetone, in the presence of an excess amount of BF3·2H2O. Assembly 3 was fully characterized by multinuclear NMR spectroscopy. Remarkably, the X-ray molecular structure of 3 shows that an anion,, interaction occurs between the neutral component Cp*Ir(,6 -C6H2O4)(BF2)2 of the assembly and the CF3SO3 anion of the cationic species [Cp*Ir(,-Cl)3IrCp*]. Computational analysis was carried out on 3 to unravel the nature of this noncovalent interaction. Such an example could serve as a model to explain the important role of anions in organometallic chemistry and asymmetric catalysis. (© Wiley-VCH Verlag GmbH & Co. KGaA, 69451 Weinheim, Germany, 2009) [source] Neutral and Cationic Methylaluminium Complexes of 2-Anilinotropone Ligands: Synthesis, Characterization, and Reactivity toward EthyleneEUROPEAN JOURNAL OF INORGANIC CHEMISTRY, Issue 6 2004Daniela Pappalardo Abstract Some new aluminium complexes bearing bidentate monoanionic 2-anilinotroponate ligands have been synthesized and characterized. Reaction of 2-(2,6-diisopropylanilino)tropone or 2-(perfluoroanilino)tropone with AlMe3 (1 equiv.) gave, by methane elimination, compounds [2-(2,6-diisopropylanilino)tropone]AlMe2 (1) and [2-(perfluoroanilino)tropone]AlMe2 (2), respectively, as yellow solids. Reaction of 1 with 1 equiv. of the ligand furnished, by protodealumination of a second Al,CH3 bond, the [2-(2,6-diisopropylanilino)tropone]2AlMe derivative 3. The structure of 3 has been determined by single-crystal X-ray diffraction, showing a five-coordinate aluminium atom with a distorted trigonal-bipyramidal geometry. Compounds 1 and 3 underwent methyl abstraction reactions with B(C6F5)3; the resulting cationic species was trapped in the presence of THF in dichloromethane solution. The reactivity of the synthesized compounds in ethylene polymerisation has also been explored. (© Wiley-VCH Verlag GmbH & Co. KGaA, 69451 Weinheim, Germany, 2004) [source] A Highly Sensitive Hybrid Colorimetric and Fluorometric Molecular Probe for Cyanide Sensing Based on a Subphthalocyanine Dye,ADVANCED FUNCTIONAL MATERIALS, Issue 9 2006E. Palomares Abstract A highly sensitive, selective colorimetric and fluorometric molecular probe based on a subphthalocyanine dye has been developed for cyanide-anion determination in aqueous solution. It has also been shown that a carboxysubphthalocyanine derivative can be covalently anchored to transparent mesoporous nanocrystalline high-surface-area metal oxide films to detect low concentrations of cyanide anion in pure water with no interference from other anionic or cationic species. [source] Solution Processing of Chalcogenide Semiconductors via Dimensional ReductionADVANCED MATERIALS, Issue 31 2009David B. Mitzi Abstract The quest to develop thin-film solution processing approaches that offer low-cost and preferably low-temperature deposition, while simultaneously providing quality semiconductor characteristics, has become an important thrust within the materials community. While inorganic compounds offer the potential for outstanding electronic properties relative to organic systems, the very nature of these materials rendering them good electronic materials,namely strong covalent bonding,also leads to poor solubility. This review presents a "dimensional reduction" approach to improving the solubility of metal chalcogenide semiconductors, which generally involves breaking the extended framework up into discrete metal chalcogenide anions separated by small and volatile cationic species. The resulting soluble precursor may be solution-processed into thin-film form and thermally decomposed to yield the desired semiconductor. Several applications of this principle to the solution deposition of high-performance active layers for transistors (channel mobility >10,cm2 V,1 s,1), solar cells (power conversion efficiency of as high as 12%), and fundamental materials study will be presented using hydrazine as the deposition solvent. [source] Structure and stability of high-spin Aun(n = 2,8) clustersINTERNATIONAL JOURNAL OF QUANTUM CHEMISTRY, Issue 4 2009Zhen-Yi Jiang Abstract The structures and relative stability of the maximum-spin n+1Aun and nAu (n = 2,8) clusters have been determined by density-functional theory. The structure optimizations and vibrational frequency analysis are performed with the gradient-corrections of Perdew along with his 1981 local correlation functional, combined with SBKJC effective core potential, augmented in the valence basis set by a set of f functions. We predicted the existence of a number of previously unknown isomers. The energetic and electronic properties of the small high-spin gold clusters are strongly dependent on sizes. The high-spin clusters tend to holding three-dimensional geometry rather than planar form preferred in low-spin situations. In whole high-spin Aun (n = 2,8) neutral and cationic species, 5Au4, 2Au, and 4Au are predicted to be of high stability, which can be explained by valence bond theory. © 2008 Wiley Periodicals, Inc. Int J Quantum Chem, 2009 [source] A mechanistic investigation into the covalent chemical derivatisation of graphite and glassy carbon surfaces using aryldiazonium saltsJOURNAL OF PHYSICAL ORGANIC CHEMISTRY, Issue 6 2008Poobalasingam Abiman Abstract Modification of carbon materials such as graphite and glassy carbon in bulk quantities using diazonium salts is developed. We used both 4-nitrobenzenediazonium tetrafluoroborate and 1-antharaquinonediazonium chloride to modify graphite and glassy carbon surfaces. Experiments were carried out in the presence and absence of hypophosphorous acid and the mechanism involved in both cases were studied using cyclic voltammetry. The observed peak potentials for both the 4-nitrophenyl and 1-anthraquinonyl modified materials were found to differ depending on whether or not the hypophosphorous acid reducing agent was used. In the absence of hypophosphorous acid the derivatisation reaction was inferred to go through a cationic intermediate, whilst in the presence of the hypophosphorous acid the mechanism likely involves either a purely radical intermediate or a mixture of radical and cationic species. Derivatisation experiments from 5 to 70°C allowed us to determine the optimum derivatisation temperature for both cases, in the presence and absence of hypophosphorous acid. Optimum temperature was 20°C for the former and 35°C for the later. Copyright © 2008 John Wiley & Sons, Ltd. [source] Controlled cationic polymerization of cyclopentadiene with B(C6F5)3 as a coinitiator in the presence of waterJOURNAL OF POLYMER SCIENCE (IN TWO SECTIONS), Issue 14 2008Sergei V. Kostjuk Abstract The controlled cationic polymerization of cyclopentadiene (CPD) at 20 °C using 1-(4-methoxyphenyl)ethanol (1)/B(C6F5)3 initiating system in the presence of fairly large amount of water is reported. The number,average molecular weights of the obtained polymers increased in direct proportion to monomer conversion in agreement with calculated values and were inversely proportional to initiator concentration, while the molecular weight distribution slightly broadened during the polymerization (Mw/Mn , 1.15,1.60). 1H NMR analyses confirmed that the polymerization proceeds via reversible activation of the COH bond derived from the initiator to generate the growing cationic species, although some loss of hydroxyl functionality happened in the course of the polymerization. It was also shown that the enchainment in cationic polymerization of CPD was affected by the nature of the solvent(s): for instance, polymers with high regioselectivity ([1,4] up to 70%) were obtained in acetonitrile, whereas lower values (around 60%) were found in CH2Cl2/CH3CN mixtures. Aqueous suspension polymerization of CPD using the same initiating system was successfully performed and allowed to synthesize primarily hydroxyl-terminated oligomers (Fn = 0.8,0.9) with Mn , 1000 g mol,1 and broad MWD (Mw/Mn , 2.2). © 2008 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 46: 4734,4747, 2008 [source] Vibrational spectra and quantum chemical calculations of uracilyl,pyridinium mesomeric betaineJOURNAL OF RAMAN SPECTROSCOPY, Issue 11 2007A. Schmidt Abstract Modified nucleobases (MNs) are promising molecules with potential application in non-linear optic (NLO) and drug design against a wide number of diseases. In the present paper we report studies on a cross-conjugated mesomeric betaine, which can act as a MN, formed by the covalent union of a 4-dimethylamino pyridinium and a uracilyl groups. The molecule thus formed must be presented by a dipolar canonical formulae in which positive and negative charges are delocalized within separated moieties. Quantum chemistry density functional theory (DFT) calculations, at the B3PW91/6-31G** level, and Fourier transform (FT) infrared and Raman spectra of this molecule and its N -deuterated derivative were performed. The calculated structural properties over the ground state optimized structure evidenced a strong separation between the two conjugated systems. Comparison with previous results obtained for the cationic species indicated that N -protonation clearly affects the degree of conjugation. Assignments of the FT-IR and FT-Raman spectra were supported by the DFT wavenumbers, intensities and normal modes, which also evidenced the separation of the two conjugated systems. Significant deviations were found for the stretching force constants of the inter-ring and the uracilyl skeletal bonds when comparing this molecule with its N -protonated species. Copyright © 2007 John Wiley & Sons, Ltd. [source] Poly(ethylene oxide)- block -poly[2-(dimethylamino)ethyl methacrylate] as Strengthening Agent in Paper: Dynamic Mechanical CharacterizationMACROMOLECULAR MATERIALS & ENGINEERING, Issue 3 2010Arja-Helena Vesterinen Abstract To enhance adhesion properties of PEO on wood fibers, block polymers of PEO and 2-(dimethylamino)ethyl methacrylate were synthesized. The polymers were further modified to obtain strongly cationic species. The resulting polymers were used as additives in paper sheets. Papers were studied by DMA in a controlled-humidity chamber. Addition of the PEO block co-polymers enhanced paper strength. The strength of the paper sheets was highest when polymer with molecular weight of 400,kg,·,mol,1 was used as an additive. Highly cationic block co-polymers increased moduli of paper sheets more than their weakly cationic analogs, which indicated strong interaction with fiber surfaces. Strength of the paper sheets decreased both with increased temperature and humidity. [source] Computational chemistry study of the environmentally important acid-catalyzed hydrolysis of atrazine and related 2-chloro- s -triazinesPEST MANAGEMENT SCIENCE (FORMERLY: PESTICIDE SCIENCE), Issue 8 2002Phillip Sawunyama Abstract Many chlorine-containing pesticides, for example 2-chloro- s -triazines, are of great concern both environmentally and toxicologically. As a result, ascertaining or predicting the fate and transport of these compounds in soils and water is of current interest. Transformation pathways for 2-chloro- s -triazines in the environment include dealkylation, dechlorination (hydrolysis), and ring cleavage. This study explored the feasibility of using computational chemistry, specifically the hybrid density functional theory method, B3LYP, to predict hydrolysis trends of atrazine (2-chloro- N4 -ethyl- N6 -isopropyl-1,3,5-triazine-2,4-diamine) and related 2-chloro- s -triazines to the corresponding 2-hydroxy- s -triazines. Gas-phase energetics are described on the basis of calculations performed at the B3LYP/6-311++G(d,p)//B3LYP/6-31G* level of theory. Calculated free energies of hydrolysis (,hG298) are nearly the same for simazine (2-chloro- N4,N6 -diethyl-1,3,5-triazine-2,4-diamine), atrazine, and propazine (2-chloro- N4,N6 -di-isopropyl-1,3,5-triazine-2,4-diamine), suggesting that hydrolysis is not significantly affected by the side-chain amine-nitrogen alkyl substituents. High-energy barriers also suggest that the reactions are not likely to be observed in the gas phase. Aqueous solvation effects were examined by means of self-consistent reaction field methods (SCRF). Molecular structures were optimized at the B3LYP/6-31G* level using the Onsager model, and solvation energies were calculated at the B3LYP/6-311++G(d,p) level using the isodensity surface polarizable continuum model (IPCM). Although the extent of solvent stabilization was greater for cationic species than neutral ones, the full extent of solvation is underestimated, especially for the transition state structures. As a consequence, the calculated hydrolysis barrier for protonated atrazine is exaggerated compared with the experimentally determined one. Overall, the hydrolysis reactions follow a concerted nucleophilic aromatic substitution (SNAr) pathway. Published in 2002 for SCI by John Wiley & Sons, Ltd [source] Photophysics in Motionally constrained Bioenvironment: Interactions of Norharmane with Bovine Serum Albumin,PHOTOCHEMISTRY & PHOTOBIOLOGY, Issue 2 2005Arabinda Mallick ABSTRACT Steady-state photophysics of norharmane (NHM), a bioactive alkaloid, has been studied in the presence of a model transport protein, bovine serum albumin (BSA). The emission spectrum undergoes a remarkable change upon addition of BSA to the aqueous solution of NHM in buffer. Addition of BSA leads to a marked increase in the fluorescence anisotropy of the neutral species of NHM, although the fluorescence anisotropy for the cationic species is almost invariant to BSA addition, suggesting that the neutral species is located in a motionally restricted environment of BSA, whereas the cationic species remains in the bulk aqueous phase. The binding constant (K) and free energy change (,G) for the probe-protein binding have been calculated from the fluorescence data. Light has been thrown on the action of urea on protein-bound NHM. The denaturation study suggests that the protein, in its native form, binds with NHM. Polarity of the microenvironment around the probe has been determined from a comparison of the fluorescence properties of the two prototropic species of NHM in water-dioxane mixture with varying composition. [source] Electron capture dissociation mass spectrometry of peptide cations containing a lysine homologue: a mobile proton model for explaining the observation of b-type product ionsRAPID COMMUNICATIONS IN MASS SPECTROMETRY, Issue 21 2006Sunyoung Lee Eleven doubly protonated peptides with a residue homologous to lysine were investigated by electron capture dissociation mass spectrometry (ECD-MS). Lysine homologues provide the unique opportunity to examine the ECD fragmentation behavior by allowing us to vary the length of the lysine side chain, with minimal structural change. The lysine homologue has a primary amine side chain with a length that successively decreases by one methylene (CH2) unit from the CH2CH2CH2CH2NH2 of lysine and the accompanying decrease of its proton affinities: lysine (K), 1006.5(±7.2) kJ/mol; ornithine (K*), 1001.1(±6.6) kJ/mol; 2,4-diaminobutanoic acid (K**), 975.8(±7.4) kJ/mol; 2,3-diaminopropanoic acid (K***), 950.2(±7.2) kJ/mol. In general, the lysine-homologous peptides exhibited overall ECD fragmentation patterns similar to that of the lysine-containing peptides in terms of the locations, abundances, and ion types of products, such as yielding c+ and z+. ions as the dominant product ions. However, a close inspection of product ion mass spectra showed that ECD-MS for the alanine-rich peptides with an ornithinyl or 2,4-diaminobutanoyl residue gave rise to b ions, while the lysinyl-residue-containing peptides did not, in most cases, produce any b ions. The peptide selectivity in the generation of b+ ions could be understood from within the framework of the mobile proton model in ECD-MS, previously proposed by Cooper (Ref. 29). The exact mass analysis of the resultant b ions reveals that these b ions are not radical species but rather the cationic species with R-CO+ structure (or protonated oxozalone ion), that is, b+ ions. The absence of [M+2H]+. species in the ECD mass spectra and the selective b+ -ion formation are evidence that the peptides underwent H-atom loss upon electron capture, and then the resulting reduced species dissociated following typical MS/MS fragmentation pathways. This explanation was further supported by extensive b+ ions generated in the ECD of alanine-based peptides with extended conformations. Copyright © 2006 John Wiley & Sons, Ltd. [source] Electronic Structure of the Ground and Excited States of ,-CarbolineCHEMPHYSCHEM, Issue 6 2008Vicente Pérez Mondéjar Abstract Coupled-cluster calculations are used to compute the energy of conversion between the neutral and the zwitterionic forms of ,-carboline. The stability of the different species is discussed in terms of charge separation and aromatic character, which is related to magnetic criteria. By means of a linear response formalism the vertical excitation energies and oscillator strengths of the lowest singlet states of both structures as well as of the cationic species are determined. General agreement of the relative position and intensity of the different peaks with experimental data is achieved, but the overall spectra are slightly displaced because of solvent effects. 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