Carlo Algorithms (carlo + algorithms)

Distribution by Scientific Domains

Kinds of Carlo Algorithms

  • monte carlo algorithms


  • Selected Abstracts


    Forced Detection Monte Carlo Algorithms for Accelerated Blood Vessel Image Simulations

    JOURNAL OF BIOPHOTONICS, Issue 3 2009
    Ingemar Fredriksson
    Abstract Two forced detection (FD) variance reduction Monte Carlo algorithms for image simulations of tissue-embedded objects with matched refractive index are presented. The principle of the algorithms is to force a fraction of the photon weight to the detector at each and every scattering event. The fractional weight is given by the probability for the photon to reach the detector without further interactions. Two imaging setups are applied to a tissue model including blood vessels, where the FD algorithms produce identical results as traditional brute force simulations, while being accelerated with two orders of magnitude. Extending the methods to include refraction mismatches is discussed. (© 2009 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim) [source]


    Sequential Monte Carlo methods for multi-aircraft trajectory prediction in air traffic management

    INTERNATIONAL JOURNAL OF ADAPTIVE CONTROL AND SIGNAL PROCESSING, Issue 10 2010
    I. Lymperopoulos
    Abstract Accurate prediction of aircraft trajectories is an important part of decision support and automated tools in air traffic management. We demonstrate that by combining information from multiple aircraft at different locations and time instants, one can provide improved trajectory prediction (TP) accuracy. To perform multi-aircraft TP, we have at our disposal abundant data. We show how this multi-aircraft sensor fusion problem can be formulated as a high-dimensional state estimation problem. The high dimensionality of the problem and nonlinearities in aircraft dynamics and control prohibit the use of common filtering methods. We demonstrate the inefficiency of several sequential Monte Carlo algorithms on feasibility studies involving multiple aircraft. We then develop a novel particle filtering algorithm to exploit the structure of the problem and solve it in realistic scale situations. In all studies we assume that aircraft fly level (possibly at different altitudes) with known, constant, aircraft-dependent airspeeds and estimate the wind forecast errors based only on ground radar measurements. Current work concentrates on extending the algorithms to non-level flights, the joint estimation of wind forecast errors and the airspeed and mass of the different aircraft and the simultaneous fusion of airborne and ground radar measurements. Copyright © 2010 John Wiley & Sons, Ltd. [source]


    Forced Detection Monte Carlo Algorithms for Accelerated Blood Vessel Image Simulations

    JOURNAL OF BIOPHOTONICS, Issue 3 2009
    Ingemar Fredriksson
    Abstract Two forced detection (FD) variance reduction Monte Carlo algorithms for image simulations of tissue-embedded objects with matched refractive index are presented. The principle of the algorithms is to force a fraction of the photon weight to the detector at each and every scattering event. The fractional weight is given by the probability for the photon to reach the detector without further interactions. Two imaging setups are applied to a tissue model including blood vessels, where the FD algorithms produce identical results as traditional brute force simulations, while being accelerated with two orders of magnitude. Extending the methods to include refraction mismatches is discussed. (© 2009 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim) [source]


    Computational screening of biomolecular adsorption and self-assembly on nanoscale surfaces

    JOURNAL OF COMPUTATIONAL CHEMISTRY, Issue 7 2010
    Hendrik Heinz
    Abstract The quantification of binding properties of ions, surfactants, biopolymers, and other macromolecules to nanometer-scale surfaces is often difficult experimentally and a recurring challenge in molecular simulation. A simple and computationally efficient method is introduced to compute quantitatively the energy of adsorption of solute molecules on a given surface. Highly accurate summation of Coulomb energies as well as precise control of temperature and pressure is required to extract the small energy differences in complex environments characterized by a large total energy. The method involves the simulation of four systems, the surface-solute,solvent system, the solute,solvent system, the solvent system, and the surface-solvent system under consideration of equal molecular volumes of each component under NVT conditions using standard molecular dynamics or Monte Carlo algorithms. Particularly in chemically detailed systems including thousands of explicit solvent molecules and specific concentrations of ions and organic solutes, the method takes into account the effect of complex nonbond interactions and rotational isomeric states on the adsorption behavior on surfaces. As a numerical example, the adsorption of a dodecapeptide on the Au {111} and mica {001} surfaces is described in aqueous solution. © 2009 Wiley Periodicals, Inc. J Comput Chem, 2010 [source]


    Particle Markov chain Monte Carlo methods

    JOURNAL OF THE ROYAL STATISTICAL SOCIETY: SERIES B (STATISTICAL METHODOLOGY), Issue 3 2010
    Christophe Andrieu
    Summary., Markov chain Monte Carlo and sequential Monte Carlo methods have emerged as the two main tools to sample from high dimensional probability distributions. Although asymptotic convergence of Markov chain Monte Carlo algorithms is ensured under weak assumptions, the performance of these algorithms is unreliable when the proposal distributions that are used to explore the space are poorly chosen and/or if highly correlated variables are updated independently. We show here how it is possible to build efficient high dimensional proposal distributions by using sequential Monte Carlo methods. This allows us not only to improve over standard Markov chain Monte Carlo schemes but also to make Bayesian inference feasible for a large class of statistical models where this was not previously so. We demonstrate these algorithms on a non-linear state space model and a Lévy-driven stochastic volatility model. [source]


    REVERSIBLE JUMP MARKOV CHAIN MONTE CARLO METHODS AND SEGMENTATION ALGORITHMS IN HIDDEN MARKOV MODELS

    AUSTRALIAN & NEW ZEALAND JOURNAL OF STATISTICS, Issue 2 2010
    R. Paroli
    Summary We consider hidden Markov models with an unknown number of regimes for the segmentation of the pixel intensities of digital images that consist of a small set of colours. New reversible jump Markov chain Monte Carlo algorithms to estimate both the dimension and the unknown parameters of the model are introduced. Parameters are updated by random walk Metropolis,Hastings moves, without updating the sequence of the hidden Markov chain. The segmentation (i.e. the estimation of the hidden regimes) is a further aim and is performed by means of a number of competing algorithms. We apply our Bayesian inference and segmentation tools to digital images, which are linearized through the Peano,Hilbert scan, and perform experiments and comparisons on both synthetic images and a real brain magnetic resonance image. [source]


    SPACE,TIME MODELLING OF SYDNEY HARBOUR WINDS

    AUSTRALIAN & NEW ZEALAND JOURNAL OF STATISTICS, Issue 1 2005
    Edward Cripps
    Summary This paper develops a space-time statistical model for local forecasting of surface-level wind fields in a coastal region with complex topography. The statistical model makes use of output from deterministic numerical weather prediction models which are able to produce forecasts of surface wind fields on a spatial grid. When predicting surface winds at observing stations, errors can arise due to sub-grid scale processes not adequately captured by the numerical weather prediction model, and the statistical model attempts to correct for these influences. In particular, it uses information from observing stations within the study region as well as topographic information to account for local bias. Bayesian methods for inference are used in the model, with computations carried out using Markov chain Monte Carlo algorithms. Empirical performance of the model is described, illustrating that a structured Bayesian approach to complicated space-time models of the type considered in this paper can be readily implemented and can lead to improvements in forecasting over traditional methods. [source]


    A Bayesian Chi-Squared Goodness-of-Fit Test for Censored Data Models

    BIOMETRICS, Issue 2 2010
    Jing Cao
    Summary We propose a Bayesian chi-squared model diagnostic for analysis of data subject to censoring. The test statistic has the form of Pearson's chi-squared test statistic and is easy to calculate from standard output of Markov chain Monte Carlo algorithms. The key innovation of this diagnostic is that it is based only on observed failure times. Because it does not rely on the imputation of failure times for observations that have been censored, we show that under heavy censoring it can have higher power for detecting model departures than a comparable test based on the complete data. In a simulation study, we show that tests based on this diagnostic exhibit comparable power and better nominal Type I error rates than a commonly used alternative test proposed by Akritas (1988,,Journal of the American Statistical Association,83, 222,230). An important advantage of the proposed diagnostic is that it can be applied to a broad class of censored data models, including generalized linear models and other models with nonidentically distributed and nonadditive error structures. We illustrate the proposed model diagnostic for testing the adequacy of two parametric survival models for Space Shuttle main engine failures. [source]


    Bayesian Nonparametric Modeling Using Mixtures of Triangular Distributions

    BIOMETRICS, Issue 2 2001
    F. Perron
    Summary. Nonparametric modeling is an indispensable tool in many applications and its formulation in an hierarchical Bayesian context, using the entire posterior distribution rather than particular expectations, increases its flexibility. In this article, the focus is on nonparametric estimation through a mixture of triangular distributions. The optimality of this methodology is addressed and bounds on the accuracy of this approximation are derived. Although our approach is more widely applicable, we focus for simplicity on estimation of a monotone nondecreasing regression on [0, 1] with additive error, effectively approximating the function of interest by a function having a piecewise linear derivative. Computationally accessible methods of estimation are described through an amalgamation of existing Markov chain Monte Carlo algorithms. Simulations and examples illustrate the approach. [source]