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Carbon Assimilation (carbon + assimilation)
Selected AbstractsEffects of Elevated CO2 on Growth, Carbon Assimilation, Photosynthate Accumulation and Related Enzymes in Rice Leaves during Sink-Source TransitionJOURNAL OF INTEGRATIVE PLANT BIOLOGY, Issue 6 2008Jun-Ying Li Abstract To study the effects of growing rice (Oryza sativa L.) leaves under the treatment of the short-term elevated CO2 during the period of sink-source transition, several physiological processes such as dynamic changes in photosynthesis, photosynthate accumulation, enzyme activities (sucrose phosphate synthase (SPS), and sucrose synthase (SS)), and their specific gene (sps1 and RSus1) expressions in both mature and developing leaf were measured. Rice seedlings with fully expanded sixth leaf (marked as the source leaf, L6) were kept in elevated (700 ,mol/mol) and ambient (350 mol/L) CO2 until the 7th leaf (marked as the sink leaf, L7) fully expanded. The results demonstrated that elevated CO2 significantly increased the rate of leaf elongation and biomass accumulation of L7 during the treatment without affecting the growth of L6. However, in both developing and mature leaves, net photosynthetic assimilation rate (A), all kinds of photosynthate contents such as starch, sucrose and hexose, activities of SPS and SS and transcript levels of sps1 and RSus1 were significantly increased under elevated CO2 condition. Results suggested that the elevated CO2 had facilitated photosynthate assimilation, and increased photosynthate supplies from the source leaf to the sink leaf, which accelerated the growth and sink-source transition in new developing sink leaves. The mechanisms of SPS regulation by the elevated CO2 was also discussed. [source] Isoprene Formation in Bacillus subtilis: A Barometer of Central Carbon Assimilation in a Bioreactor?BIOTECHNOLOGY PROGRESS, Issue 5 2002Megan C. Shirk Isoprene (2-methyl-1,3-butadiene) is a volatile hydrocarbon of uncertain function in Bacillus subtilis, and we hypothesized that it is an overflow metabolite produced during excess carbon utilization. Here we tested this idea for phase 2 of isoprene release, a phase that occurs during extracellular acetoin accumulation and its reassimilation. Phase 2 isoprene formation could be disrupted in three different ways, all related to acetoin metabolism. Disruption of a gene essential for acetoin biosynthesis (acetolactic acid synthase, alsS) blocked acetoin formation and led to cessation of phase 2 isoprene formation as well as a variety of pleiotropic effects related to loss of pH control. Growth of the alsS mutant with external pH control reversed most of these effects. Disruption of acetoin catabolism (acetoin dehydrogenase, acoA), also eliminated phase 2 isoprene formation and caused cells to transition directly from phase 1 to phase 3; the latter is attributed to amino acid catabolism. A third alteration of acetoin metabolism was detected in the widely used strain 168 ( trpC2) but not in strain MS175, a trpC mutant constructed in the Marburg strain genetic background. Strain 168 exhibited slow acetoin assimilation compared to that of MS175 or the parental strain, with little or no isoprene formation during this growth phase. These findings support the idea that isoprene release occurs primarily when the rate of carbon catabolism exceeds anabolism and that this volatile hydrocarbon is a product of overflow metabolism when precursors are not required for higher isoprenoid biosynthesis. It is suggested that isoprene release might serve as a useful barometer of the rise and fall of central carbon fluxes during the growth of Bacillus strains in industrial bioreactors. [source] Decline in a dominant invertebrate species contributes to altered carbon cycling in a low-diversity soil ecosystemGLOBAL CHANGE BIOLOGY, Issue 8 2008J. E. BARRETT Abstract Low-diversity ecosystems cover large portions of the Earth's land surface, yet studies of climate change on ecosystem functioning typically focus on temperate ecosystems, where diversity is high and the effects of individual species on ecosystem functioning are difficult to determine. We show that a climate-induced decline of an invertebrate species in a low-diversity ecosystem could contribute to significant changes in carbon (C) cycling. Recent climate variability in the McMurdo Dry Valleys of Antarctica is associated with changes in hydrology, biological productivity, and community composition of terrestrial and aquatic ecosystems. One of the greatest changes documented in the dry valleys is a 65% decrease in the abundance of the dominant soil invertebrate (Scottnema lindsayae, Nematoda) between 1993 and 2005, illustrating sensitivity of biota in this ecosystem to small changes in temperature. Globally, such declines are expected to have significant influences over ecosystem processes such as C cycling. To determine the implications of this climate-induced decline in nematode abundance on soil C cycling we followed the fate of a 13C tracer added to soils in Taylor Valley, Antarctica. Carbon assimilation by the dry valley nematode community contributed significantly to soil C cycling (2,7% of the heterotrophic C flux). Thus, the influence of a climate-induced decline in abundance of a dominant species may have a significant effect on ecosystem functioning in a low-diversity ecosystem. [source] Plant functional traits and soil carbon sequestration in contrasting biomesECOLOGY LETTERS, Issue 5 2008Gerlinde B. De Deyn Abstract Plant functional traits control a variety of terrestrial ecosystem processes, including soil carbon storage which is a key component of the global carbon cycle. Plant traits regulate net soil carbon storage by controlling carbon assimilation, its transfer and storage in belowground biomass, and its release from soil through respiration, fire and leaching. However, our mechanistic understanding of these processes is incomplete. Here, we present a mechanistic framework, based on the plant traits that drive soil carbon inputs and outputs, for understanding how alteration of vegetation composition will affect soil carbon sequestration under global changes. First, we show direct and indirect plant trait effects on soil carbon input and output through autotrophs and heterotrophs, and through modification of abiotic conditions, which need to be considered to determine the local carbon sequestration potential. Second, we explore how the composition of key plant traits and soil biota related to carbon input, release and storage prevail in different biomes across the globe, and address the biome-specific mechanisms by which plant trait composition may impact on soil carbon sequestration. We propose that a trait-based approach will help to develop strategies to preserve and promote carbon sequestration. [source] High rates of net ecosystem carbon assimilation by Brachiara pasture in the Brazilian CerradoGLOBAL CHANGE BIOLOGY, Issue 5 2004Alexandre J.B. Santos Abstract To investigate the consequences of land use on carbon and energy exchanges between the ecosystem and atmosphere, we measured CO2 and water vapour fluxes over an introduced Brachiara brizantha pasture located in the Cerrado region of Central Brazil. Measurements using eddy covariance technique were carried out in field campaigns during the wet and dry seasons. Midday CO2 net ecosystem exchange rates during the wet season were ,40 ,mol m,2 s,1, which is more than twice the rate found in the dry season (,15 ,mol m,2 s,1). This was observed despite similar magnitudes of irradiance, air and soil temperatures. During the wet season, inferred rates of canopy photosynthesis did not show any tendency to saturate at high solar radiation levels, with rates of around 50 ,mol m,2 s,1 being observed at the maximum incoming photon flux densities of 2200 ,mol m,2 s,1. This contrasted strongly to the dry period when light saturation occurred with 1500 ,mol m,2 s,1 and with maximum canopy photosynthetic rates of only 20 ,mol m,2 s,1. Both canopy photosynthetic rates and night-time ecosystem CO2 efflux rates were much greater than has been observed for cerrado native vegetation in both the wet and dry seasons. Indeed, observed CO2 exchange rates were also much greater than has previously been reported for C4 pastures in the tropics. The high rates in the wet season may have been attributable, at least in part, to the pasture not being grazed. Higher than expected net rates of carbon acquisition during the dry season may also have been attributable to some early rain events. Nevertheless, the present study demonstrates that well-managed, productive tropical pastures can attain ecosystem gas exchange rates equivalent to fertilized C4 crops growing in the temperate zone. [source] Human modification of the landscape and surface climate in the next fifty yearsGLOBAL CHANGE BIOLOGY, Issue 5 2002R. S. Defries Abstract Human modification of the landscape potentially affects exchanges of energy and water between the terrestrial biosphere and the atmosphere. This study develops a possible scenario for land cover in the year 2050 based on results from the IMAGE 2 (Integrated Model to Assess the Greenhouse Effect) model, which projects land-cover changes in response to demographic and economic activity. We use the land-cover scenario as a surface boundary condition in a biophysically-based land-surface model coupled to a general circulation model for a 15-years simulation with prescribed sea surface temperature and compare with a control run using current land cover. To assess the sensitivity of climate to anthropogenic land-cover change relative to the sensitivity to decadal-scale interannual variations in vegetation density, we also carry out two additional simulations using observed normalized difference vegetation index (NDVI) from relatively low (1982,83) and high (1989,90) years to describe the seasonal phenology of the vegetation. In the past several centuries, large-scale land-cover change occurred primarily in temperate latitudes through conversion of forests and grassland to highly productive cropland and pasture. Several studies in the literature indicate that past changes in surface climate resulting from this conversion had a cooling effect owing to changes in vegetation morphology (increased albedo). In contrast, this study indicates that future land-cover change, likely to occur predominantly in the tropics and subtropics, has a warming effect governed by physiological rather than morphological mechanisms. The physiological mechanism is to reduce carbon assimilation and consequently latent relative to sensible heat flux resulting in surface temperature increases up to 2 °C and drier hydrologic conditions in locations where land cover was altered in the experiment. In addition, in contrast to an observed decrease in diurnal temperature range (DTR) over land expected with greenhouse warming, results here suggest that future land-cover conversion in tropics could increase the DTR resulting from decreased evaporative cooling during the daytime. For grid cells with altered land cover, the sensitivity of surface temperature to future anthropogenic land-cover change is generally within the range induced by decadal-scale interannual variability in vegetation density in temperate latitudes but up to 1.5 °C warmer in the tropics. [source] DROUGHT STRESS: Comparative Time Course Action of the Foliar Applied Glycinebetaine, Salicylic Acid, Nitrous Oxide, Brassinosteroids and Spermine in Improving Drought Resistance of RiceJOURNAL OF AGRONOMY AND CROP SCIENCE, Issue 5 2010M. Farooq Abstract Worldwide rice productivity is being threatened by increased endeavours of drought stress. Among the visible symptoms of drought stress, hampered water relations and disrupted cellular membrane functions are the most important. Exogenous use of polyamines (PAs), salicylic acid (SA), brassinosteroids (BRs), glycinebetaine (GB) and nitrous oxide (NO) can induce abiotic stresses tolerance in many crops. In this time course study, we appraised the comparative role of all these substances to improve the drought tolerance in rice (Oryza sativa L.) cultivar Super-Basmati. Plants were subjected to drought stress at four leaf stage (4 weeks after emergence) by maintaining soil moisture at 50 % of field capacity. Pre-optimized concentrations of GB (150 mg l,1), SA (100 mg l,1), NO (100 ,mol l,1 sodium nitroprusside as NO donor), BR (0.01 ,m 24-epibrassinolide) and spermine (Spm; 10 ,m) were foliar sprayed at five-leaf stage (5 weeks after emergence). There were two controls both receiving no foliar spray, viz. well watered (CK1) and drought stressed (CK2). There was substantial reduction in allometric response of rice, gas exchange and water relation attributes by drought stress. While drought stress enhanced the H2O2, malondialdehyde (MDA) and relative membrane permeability, foliar spray of all the chemicals improved growth possibly because of the improved carbon assimilation, enhanced synthesis of metabolites and maintenance of tissue water status. Simultaneous reduction in H2O2 and MDA production was also noted in the plants treated with these substances. Drought tolerance was sturdily associated with the greater tissue water potential, increased synthesis of metabolites and enhanced capacity of antioxidant system. Of all the chemicals, foliar spray with Spm was the most effective followed by BR. [source] Limitations to CO2 assimilation in ozone-exposed leaves of Plantago majorNEW PHYTOLOGIST, Issue 1 2002Y. Zheng Summary ,,The potential limitations on net leaf carbon assimilation imposed by stomatal conductance, carboxylation velocity, capacity for ribulose 1,5-bisphosphate regeneration and triose phosphate ultilization rate were derived from steady-state gas exchange measurements made over the life-span of two leaves on plants of an ,O3 -sensitive' population of Plantago major grown at contrasting atmospheric O3 concentrations. ,,Parallel measurements of chlorophyll fluorescence were used to monitor changes in the quantum efficiency of PSII photochemistry, and in vitro measurements of Rubisco activity were made to corroborate modelled gas exchange data. ,,Data indicated that a loss of Rubisco was predominantly responsible for the decline in CO2 assimilation observed in O3 -treated leaves. The quantum efficiency of PSII was unchanged by O3 exposure. ,,Stomatal aperture declined in parallel with CO2 assimilation in O3 -treated plants, but this did not account for the observed decline in photosynthesis. Findings suggested that O3 -induced shifts in stomatal conductance result from ,direct' effects on the stomatal complex as well as ,indirect effects' mediated through changes in intercellular CO2 concentration. Leaves on the same plant exposed to equivalent levels of O3 showed striking differences in their response to the pollutant. [source] Antioxidative Responses of Two Marine Microalgae During Acclimation to Static and Fluctuating Natural UV RadiationPHOTOCHEMISTRY & PHOTOBIOLOGY, Issue 6 2009Paul J. Janknegt Photoacclimation properties were investigated in two marine microalgae exposed to four ambient irradiance conditions: static photosynthetically active radiation (PAR: 400,700 nm), static PAR + UVR (280,700 nm), dynamic PAR and dynamic PAR + UVR. High light acclimated cultures of Thalassiosira weissflogii and Dunaliella tertiolecta were exposed outdoors for a maximum of 7 days. Dynamic irradiance was established by computer controlled vertical movement of 2 L bottles in a water filled basin. Immediate (<24 h), short-term (1,3 days) and long-term (4,7 days) photoacclimation was followed for antioxidants (superoxide dismutase, ascorbate peroxidase and glutathione cycling), growth and pigment pools. Changes in UVR sensitivity during photoacclimation were monitored by measuring UVR-induced inhibition of carbon assimilation under standardized UV conditions using an indoor solar simulator. Both species showed immediate antioxidant responses due to their transfer to the outdoor conditions. Furthermore, upon outdoor exposure, carbon assimilation and growth rates were reduced in both species compared with initial conditions; however, these effects were most pronounced in D. tertiolecta. Outdoor UV exposure did not alter antioxidant levels when compared with PAR-only controls in both species. In contrast, growth was significantly affected in the static UVR cultures, concurrent with significantly enhanced UVR resistance. We conclude that antioxidants play a minor role in the reinforcement of natural UVR resistance in T. weissflogii and D. tertiolecta. [source] Importance of AOX pathway in optimizing photosynthesis under high light stress: role of pyruvate and malate in activating AOXPHYSIOLOGIA PLANTARUM, Issue 1 2010Challabathula Dinakar The present study shows the importance of alternative oxidase (AOX) pathway in optimizing photosynthesis under high light (HL). The responses of photosynthesis and respiration were monitored as O2 evolution and O2 uptake in mesophyll protoplasts of pea pre-incubated under different light intensities. Under HL (3000 µmol m,2 s,1), mesophyll protoplasts showed remarkable decrease in the rates of NaHCO3 -dependent O2 evolution (indicator of photosynthetic carbon assimilation), while decrease in the rates of respiratory O2 uptake were marginal. While the capacity of AOX pathway increased significantly by two fold under HL, the capacity of cytochrome oxidase (COX) pathway decreased by >50% compared with capacities under darkness and normal light (NL). Further, the total cellular levels of pyruvate and malate, which are assimilatory products of active photosynthesis and stimulators of AOX activity, were increased remarkably parallel to the increase in AOX protein under HL. Upon restriction of AOX pathway using salicylhydroxamic acid (SHAM), the observed decrease in NaHCO3 -dependent O2 evolution or p -benzoquinone (BQ)-dependent O2 evolution [indicator of photosystem II (PSII) activity] and the increase in total cellular levels of pyruvate and malate were further aggravated/promoted under HL. The significance of raised malate and pyruvate levels in activation of AOX protein/AOX pathway, which in turn play an important role in dissipating excess chloroplastic reducing equivalents and sustenance of photosynthetic carbon assimilation to balance the effects of HL stress on photosynthesis, was depicted as a model. [source] Height-related growth declines in ponderosa pine are not due to carbon limitationPLANT CELL & ENVIRONMENT, Issue 1 2009ANNA SALA ABSTRACT Decreased gas exchange as trees grow tall has been proposed to explain age-related growth declines in trees. We examined changes of mobile carbon stores (starch, sugars and lipids) with tree height in ponderosa pine (Pinus ponderosa) at two sites differing in water availability, and tested the following hypotheses: (1) carbon supply does not become increasingly limited as trees grow tall; rather, the concentration of mobile carbon compounds increases with tree height reflecting greater reductions of carbon sink activities relative to carbon assimilation; and (2) increases of stored mobile carbon compounds with tree height are greater in drier sites. Height-related growth reductions were associated with significant increases of non-structural carbohydrates (NSC) and lipid concentrations in all tissues in the upper canopy and of NSC in the bole. Lipid concentrations in the bole decreased with tree height, but such decrease is not necessarily inconsistent with non-limiting carbon supply in tall trees. Furthermore, we found stronger increases of mobile carbon stores with tree height at the dry site relative to the moist site. Our results provide first direct evidence that carbon supply does not limit growth in tall trees and that decreases of water availability might negatively impact growth processes more than net-photosynthesis. [source] Improved temperature response functions for models of Rubisco-limited photosynthesisPLANT CELL & ENVIRONMENT, Issue 2 2001C. J. Bernacchi ABSTRACT Predicting the environmental responses of leaf photosynthesis is central to many models of changes in the future global carbon cycle and terrestrial biosphere. The steady-state biochemical model of C3 photosynthesis of Farquhar et al. (Planta 149, 78,90, 1980) provides a basis for these larger scale predictions; but a weakness in the application of the model as currently parameterized is the inability to accurately predict carbon assimilation at the range of temperatures over which significant photosynthesis occurs in the natural environment. The temperature functions used in this model have been based on in vitro measurements made over a limited temperature range and require several assumptions of in vivo conditions. Since photosynthetic rates are often Rubisco-limited (ribulose, 1-5 bisphosphate carboxylase/oxygenase) under natural steady-state conditions, inaccuracies in the functions predicting Rubisco kinetic properties at different temperatures may cause significant error. In this study, transgenic tobacco containing only 10% normal levels of Rubisco were used to measure Rubisco-limited photosynthesis over a large range of CO2 concentrations. From the responses of the rate of CO2 assimilation at a wide range of temperatures, and CO2 and O2 concentrations, the temperature functions of Rubisco kinetic properties were estimated in vivo. These differed substantially from previously published functions. These new functions were then used to predict photosynthesis in lemon and found to faithfully mimic the observed pattern of temperature response. There was also a close correspondence with published C3 photosynthesis temperature responses. The results represent an improved ability to model leaf photosynthesis over a wide range of temperatures (10,40 °C) necessary for predicting carbon uptake by terrestrial C3 systems. [source] Simulated effects of herb competition on planted Quercus faginea seedlings in Mediterranean abandoned croplandAPPLIED VEGETATION SCIENCE, Issue 2 2003Benayas Rey Abstract. We tested simulated effects of herb competition on the performance of planted seedlings of Quercus faginea ssp. faginea in Mediterranean abandoned cropland. We produced three types of environment with respect to herb competition: absence of competition (AC), below-ground competition (BGC), and total competition (TC). We assessed the performance of Q. faginea seedlings in each treatment in five ways: (1) seedling mortality, (2) leaf length and total plant leaf area, (3) water potential, (4) total biomass and biomass allocation, and (5) non-structural carbohydrate storage in different plant organs. We also measured (6) soil moisture at different depths and (7) biomass production of herbs. The TC treatment reduced water availability more than the BGC treatment, in agreement with the most pronounced water stress in seedlings under TC conditions. BGC and TC treatments showed a high and similar seedling mortality, which was one order of magnitude higher than that in the AC treatment. Competition treatments affected glucose concentration in both shoots and roots, and followed the rank TC > BGC > AC. Q. faginea seedlings might compensate a lower water availability through glucose accumulation in leaves to reduce the osmotic potential. There was a maximum starch concentration in the BGC treatment that hints that a moderate resource limitation would limit tissue growth but not carbon assimilation. We conclude that the negative effects of herbs on Q. faginea seedlings are mostly a result of competition for water, and that this competition is noticeable since the earliest stages of the establishment. Complete weed removal is a technique that would strongly improve seedling survivorship. [source] | |||||||||||||