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Biological Traits (biological + trait)
Selected AbstractsTHE MACROEVOLUTIONARY DYNAMICS OF ANT DIVERSIFICATIONEVOLUTION, Issue 11 2009Marcio R. Pie The availability of increasingly comprehensive phylogenies has provided unprecedented opportunities to assess macroevolutionary patterns, yet studies on invertebrate diversification are few. In particular, despite the ecological and evolutionary importance of ants, little is known about their tempo and mode of diversification. Recent advances in ant phylogenetics can now provide a basis for rigorous analyses of the diversification of ant lineages. The goals of the present study are threefold. First, we demonstrate that a hypothesized disproportionate increase in ant diversification during the angiosperm radiation is largely artifactual. Rather, current evidence points to a fairly constant rate of lineage growth during its history. Moreover, an analysis of diversification patterns across the ant phylogeny indicates considerable rate heterogeneity among lineages. Indeed, and contrary to the expectation if lineages had experienced a single rate of lineage increase, we found no correspondence between genus age and diversity. Finally, we demonstrate a statistically significant phylogenetic signal in ant diversification: closely related genera have diversities that are more similar to one another than one would expect by chance. This suggests that the capacity for diversification may be itself a biological trait that evolved during the radiation of the family Formicidae. [source] Biology, distribution and impacts of silverleaf nightshade (Solanum elaeagnifolium Cav.),EPPO BULLETIN, Issue 1 2007M. Mekki Silverleaf nightshade, Solanum elaeagnifolium, is listed as a noxious weed in its native range (Americas) and as an invasive alien plant in many countries across the world. Its local pattern of distribution in the EPPO region indicates that it is still in an establishment phase. S. elaeagnifolium invasiveness could be related to several biological traits: copious production of sexual and asexual propagules, its facility for long-distance dispersion, its ability to endure considerable drought and to dominate shallow-rooted vegetation, especially during summer dry periods, and its capacity to suppress more valuable species because it is unpalatable and toxic to cattle. Invasion of the Mediterranean semi-arid region by S. elaeagnifolium was mainly facilitated by irrigation and animal production. Low moisture stress may favour this invasive species and sheep are an important pathway for its long-distance dispersal. Once established, it is one of the most difficult weeds to eradicate because of its network of creeping horizontal and deep vertical roots. Its phenotypic plasticity enables it to adopt a rosette-like growth pattern to escape control by repeated slashing. Thus, S. elaeagnifolium monitoring in the EPPO region is vital in order to contain established populations and prevent invasion. [source] DETECTING THE HISTORICAL SIGNATURE OF KEY INNOVATIONS USING STOCHASTIC MODELS OF CHARACTER EVOLUTION AND CLADOGENESISEVOLUTION, Issue 2 2005Richard H. Ree Abstract Phylogenetic evidence for biological traits that increase the net diversification rate of lineages (key innovations) is most commonly drawn from comparisons of clade size. This can work well for ancient, unreversed traits and for correlating multiple trait origins with higher diversification rates, but it is less suitable for unique events, recently evolved innovations, and that exhibit homoplasy. Here I present a new method for detecting the phylogenetic signature of key innovations that tests whethere the evolutionary history of the candidate trait is associated with shorter waiting times between cladogenesis events. The method employs stochastic models of character evolution and cladogenesis and integrates well into a Bayesian framework in which uncertainty in historical inferences (such as phylogenetic relationships) is allowed. Applied to a well-known example in plants, nectar spurs in columbines, the method gives much stronger support to the key innovation hypothesis than previous tests. [source] PHYLOGENETICALLY NESTED COMPARISONS FOR TESTING CORRELATES OF SPECIES RICHNESS: A SIMULATION STUDY OF CONTINUOUS VARIABLESEVOLUTION, Issue 1 2003NICK J. B. ISAAC Abstract., Explaining the uneven distribution of species among lineages is one of the oldest questions in evolution. Proposed correlations between biological traits and species diversity are routinely tested by making comparisons between phylogenetic sister clades. Several recent studies have used nested sister-clade comparisons to test hypotheses linking continuously varying traits, such as body size, with diversity. Evaluating the findings of these studies is complicated because they differ in the index of species richness difference used, the way in which trait differences were treated, and the statistical tests employed. In this paper, we use simulations to compare the performance of four species richness indices, two choices about the branch lengths used to estimate trait values for internal nodes and two statistical tests under a range of models of clade growth and character evolution. All four indices returned appropriate Type I error rates when the assumptions of the method were met and when branch lengths were set proportional to time. Only two of the indices were robust to the different evolutionary models and to different choices of branch lengths and statistical tests. These robust indices had comparable power under one nonnull scenario. Regression through the origin was consistently more powerful than the t -test, and the choice of branch lengths exerts a strong effect on both the validity and power. In the light of our simulations, we re-evaluate the findings of those who have previously used nested comparisons in the context of species richness. We provide a set of simple guidelines to maximize the performance of phylogenetically nested comparisons in tests of putative correlates of species richness. [source] Biological and ecological traits of benthic freshwater macroinvertebrates: relationships and definition of groups with similar traitsFRESHWATER BIOLOGY, Issue 2 2000Philippe Usseglio-Polatera Summary 1Relating species traits to habitat characteristics can provide important insights into the structure and functioning of stream communities. However, trade-offs among species traits make it difficult to predict accurately the functional diversity of freshwater communities. Many authors have pointed to the value of working with groups of organisms as similar as possible in terms of relationships among traits and have called for definition of groups of organisms with similar suites of attributes. 2We used multivariate analyses to examine separately the relationships among 11 biological traits and among 11 ecological traits of 472 benthic macroinvertebrate taxa (mainly genera). The main objective was to demonstrate (1) potential trade-offs among traits; (2) the importance of the different traits to separate systematic units or functional groupings; and (3) uniform functional groups of taxa that should allow a more effective use of macroinvertebrate biological and ecological traits. 3We defined eight groups and 15 subgroups according to a biological trait ordination which highlighted size (large to small), reproductive traits (K to r strategists), food (animal to plant material) and feeding habits (predator to scraper and/or deposit feeder) as ,significant' factors determining the ordination of taxa. This ordination partly preserved phylogenetic relationships among groups. 4Seven ecological groups and 13 ecological subgroups included organisms with combinations of traits which should be successively more adequate in habitats from the main channel to temporary waters, and from the crenon to the potamic sections of rivers, and to systems situated outside the river floodplain. These gradients corresponded to a gradual shift from (1) rheophilic organisms that lived in the main channel of cold oligotrophic mountain streams to (2) animals that preferred eutrophic habitats of still or temporary waters in lowlands. The groups with similar ecological traits had a more diverse systematic structure than those with similar biological traits. 5Monitoring and assessment tools for the management of water resources are generally more effective if they are based on a clear understanding of the mechanisms that lead to the presence or absence of species groups in the environment. We believe that groups with similar relationships among their species traits may be useful in developing tools that measure the functional diversity of communities. [source] Biological Indicator Systems in Floodplains , a ReviewINTERNATIONAL REVIEW OF HYDROBIOLOGY, Issue 4 2006Frank Dziock Abstract Based on a literature review, the different approaches to biological indicator systems in floodplains are summarised. Four general categories of bioindication are defined and proposed here: 1. Classification indicators, 2.1 Environmental indicators, 2.2 Biodiversity indicators, 3. Valuation indicators. Furthermore, existing approaches in floodplains are classified according to the four categories. Relevant and widely used approaches in floodplains are explained in more detail. The results of the RIVA project are put into the context of these indication approaches. It is concluded that especially functional assessment approaches using biological traits of the species can be seen as very promising and deserve more attention by conservation biologists and floodplain ecologists. (© 2006 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim) [source] Ecogeographical rules: elements of a synthesisJOURNAL OF BIOGEOGRAPHY, Issue 3 2008Kevin J. Gaston Abstract The development of a more synthetic approach to understanding spatial patterns in biogeography, particularly of the way in which these patterns interact, constitutes a major challenge for the field. Here we propose some key elements of such a synthesis for what can broadly be termed ,ecogeographical rules', that is spatial patterns in biological traits. These include understanding: (1) the different kinds of patterns (intraspecific, interspecific and assemblage), and the distinctions between them; (2) the unifying role that geographical ranges play in linking the patterns together; (3) that this unification can be obscured by the methodological assumptions made in documenting some patterns (e.g. assuming that intraspecific variation does not significantly influence interspecific and assemblage patterns in traits); (4) the implications of other methodological issues for the nature of observed patterns (e.g. how ranges are located on positional or environmental axes for interspecific patterns); (5) the need for further development of models linking different types of traits; (6) the nature of the generality of documented patterns at all levels, and particularly the difference between the frequency with which patterns are documented in the literature and the variety of extant species; and (7) the constraints that the form of intraspecifi patterns place on interspecific and assemblage patterns, and that interspecific patterns place on assemblage patterns. [source] Effects of climate and local aridity on the latitudinal and habitat distribution of Arvicanthis niloticus and Arvicanthis ansorgei (Rodentia, Murinae) in MaliJOURNAL OF BIOGEOGRAPHY, Issue 1 2004B. Sicard Abstract Introduction, The genus Arvicanthis (Lesson 1842) (Rodentia: Murinae), usually referred to as the unstriped grass rat, is mainly distributed in savanna and grassland habitats of Sub-Saharan Africa. Among the four chromosomal forms of Arvicanthis recently differentiated in Western and Central Africa, the one with a diploid chromosomal number (2n) of 62 and an autosomal fundamental number (NFa) of 62 or 64 is ascribed to Arvicanthis niloticus (Demarest 1822), while the one with 2n = 62 and a NFa between 74 and 76 is referred to A. ansorgei (Thomas 1910). Despite the broad area of sympatry recently uncovered along the inner delta of the Niger river in Mali [details in Volobouev et al. (2002) Cytogenetics and Genome Research, 96, 250,260], the distribution of the two species is largely parapatric and follows the latitudinal patterns of the West-African biogeographical domains, which are related to the latitudinal patterns of annual rainfall in this region. Here, we analyse the suggestion that the two species show specific adaptations to differences in climate aridity. Methods, Karyologically screened animals were sampled in 19 localities in seasonally flooded regions located along the ,Niger' river in Mali and extending from 1100 to 200 mm of mean annual rainfall. The analysis of trapping success (TS) data allowed us to investigate the respective effects of climate (i.e. annual rainfall) and local (i.e. duration of the green herbaceous vegetation) aridity on the latitudinal and habitat distribution of the two species. Conclusions, The broad zone of sympatry was found to correspond to a northward expansion of the recognized distribution area of A. ansorgei. TS values indicated that the two species responded very differently to climatic and local conditions of aridity. Arvicanthis ansorgei decreased in TS as regional conditions became more arid; a similar trend was also observed within regions where habitat occupancy decreased with local aridity. The higher TS observed in the most humid habitat relative to the others persisted throughout the latitudinal rainfall gradient. In contrast, TS of A. niloticus increased with latitudinal aridity. This species was present in more arid habitats than A. ansorgei from 1000 mm down to 400 mm of mean annual rainfall where a shift to the most humid habitat occurred. These opposite trends in TS distribution between species suggest that A. ansorgei is less adapted than A. niloticus to arid environments at both a regional and habitat level; thus, A. ansorgei would be able to invade dry regions only along the extensive floodplains bordering the inner delta of the ,Niger' river. Several biological traits that may be involved in limiting the southward distribution of A. niloticus are discussed. [source] The distribution of South American galaxiid fishes: the role of biological traits and post-glacial historyJOURNAL OF BIOGEOGRAPHY, Issue 1 2004Víctor Cussac Abstract Aim, The aim of this work is to update the distribution data of Galaxiidae in South America, relating extant distribution to physiological and reproductive characteristics of the species, latitude, temperature, and post-glacial opportunities for colonization. Location, Lakes and rivers of Patagonia. Methods, We compared, and eventually reconsidered, general data about distribution based on the original literature about capture sites, incorporating several published and unpublished data to the analysis of the biological traits and distribution of Galaxiidae. Results, The more consistent issue in the comprehension of galaxiid biogeography in South America is the ability to establish landlocked populations. Different founding events in landlocked populations of Galaxias maculatus suggest the possible existence of older and younger landlocked populations. This difference in the time since the establishment of lacustrine populations could have been expressed in their ability for colonization of post-glacial areas. Galaxias maculatus, Aplochiton and Brachygalaxias are more clearly excluded from the post-glacial area than G. platei. For all the species we could note a more abundant record of lake populations at the area of glacial refuges. It could be noted that the most successful species, Galaxias platei, is a specialized deep bottom dweller. Deep bottom dwelling helps to endure winter constraints and it appears to be an alternative to the colonization of the littoral and limnetic zones of post-glacial lakes, the prefered habitat of the other Patagonian fish species. Main conclusions, At the end of this process of post-glacial colonization, in the beginning of twentieth century, man introduced several salmonid species in Patagonia. In addition, antropogenic actions had its more recent consequences in global warming. Nowadays we were able to observe new localities for Brazilian fishes into the Austral Subregion and expect some changes in the distribution of Galaxiidae. Northern limits for all species and southern limits for landlocked G. maculatus, Brachigalaxias bullocki and Aplochiton zebra, could be displaced southward. Probably, the species less affected by the changes will be G. platei. These predictions could be accurately formulated using the model of B.J. Shuter & J.R. Post (1990) Transactions of the American Fisheries Society119, 314,336, when biological database on these species are completed. [source] Rarity, specialization and extinction in primatesJOURNAL OF BIOGEOGRAPHY, Issue 4 2002A. H. Harcourt Aim To determine and explain biological traits that distinguish rare from common primate taxa. Location Africa, Americas, Asia, Madagascar. Methods We compare the biology of rare primate taxa with the biology of common taxa. Rarity is defined by (1) small size of geographic range; (2) small geographic range plus low local population density; and (3) small geographic range plus low local density plus narrow habitat specificity. After a linear comparison of size of geographic range with various biological traits, globally and by realm, extremes of rarity and commonness per realm are identified, and then combined for a global analysis. Tests are done both with genera treated as independent data points (n=62), and also with phylogenetic control by use of an independent contrasts test. Extinction risk in vertebrates, including primates, often correlates with high resource requirements, slow population recovery rate, and specialization. The three indices of rarity are therefore compared with these three general traits. Measures of resource use are body mass, local density, annual range size, and group size; of recovery rate, interbirth interval, and maximum intrinsic rate of natural population increase; and of degree of specialization, variety of diet, of habitats, maximum latitude, and morphological variety. All data come from the literature. Because several measures are compared, probabilities are Bonferroni corrected. Results If rarity in primates correlates with any biological attribute, it consistently correlates with only measures of specialization, and not with measures of high resource use, or slow population recovery rate. Without phylogenetic correction, the first two indices of rarity associate significantly with all four measures of specialization, and the third with maximum latitude. With phylogenetic correction, the first index still associates with all four, the second with two (maximum latitude, number of species per genus), and the third shows no significant associations. While the four measures of specialization are strongly interrelated, stepwise regressions on geographic range indicate that maximum latitude has the strongest effect, followed by dietary variety and number of species per genus and, finally, habitat variety. Main conclusions The most commonly demonstrated traits of susceptibility to extinction are those of high resource use, slow recovery rate, and specialization. Yet, while rarity (almost however, it is defined) is an inevitable precursor to extinction, specialization is the only trait found to correlate with rarity in this study. We cannot explain this apparent contradiction. [source] Spatial patterns of the biological traits of freshwater fish communities in south-west FranceJOURNAL OF FISH BIOLOGY, Issue 2 2005F. Santoul Spatial patterns in the combinations of biological traits of fish communities were studied in the Garonne River system (57 000 km2, south-west France). Fish species assemblages were recorded at 554 sampling sites, and the biological traits of species were described using a fuzzy-coding method. A co-inertia analysis of species distributions and biological traits identified some spatial patterns of species trait combinations. Fish species richness progressively increased from up- to downstream sections, and the longitudinal patterns of fish assemblages partitioned the river into clear biogeographic areas, such as the brown trout Salmo trutta(headwater streams), the grayling Thymallus thymallus, the barbel Barbus barbus and the bream Abramis brama zones (most downstream sections), which fitted with Huet's well-known zonation for western European rivers. Only a few biological traits, chiefly related to life-history attributes, significantly influenced the observed fish distributions. Fecundity, potential size, maximum age and reproductive factor increased from headwater to plain reaches. As a theoretical framework for assessing and predicting the functional organization of stream fish communities, spatial variations in species traits can be related to habitat conditions, thus providing explicit spatial schemes that may be useful to the design of both scientific studies and river management. [source] Personality and Risk-Taking: Common Bisocial FactorsJOURNAL OF PERSONALITY, Issue 6 2000Marvin Zuckerman The first part of this article describes a study of the relationships between personality and risk-taking in six areas: smoking, drinking, drugs, sex, driving, and gambling. The participants, 260 college students, were given self-report measures of risky behaviors in each of the six areas and the Zuckerman- Kuhlman five-factor personality questionnaire. Generalized risk-taking (across all six areas) was related to scales for impulsive sensation seeking, aggression, and sociability, but not to scales for neuroticism or activity. Gender differences on risk-taking were mediated by differences on impulsive sensation seeking. The second part discusses biological traits associated with both risk-taking and personality, particularly sensation seeking, such as the D4 dopamine receptor gene, the enzyme monoamine oxidase, and augmenting or reducing of the cortical evoked potential. Comparative studies show relationships between biological markers shared with other species and correlated behaviors similar to sensation seeking in humans. A biosocial model of the traits underlying risk-taking is presented. [source] Advances in Campylobacter biology and implications for biotechnological applicationsMICROBIAL BIOTECHNOLOGY, Issue 3 2010Byeonghwa Jeon Summary Campylobacter jejuni is a major foodborne pathogen of animal origin and a leading cause of bacterial gastroenteritis in humans. During the past decade, especially since the publication of the first C. jejuni genome sequence, major advances have been made in understanding the pathobiology and physiology of this organism. It is apparent that C. jejuni utilizes sophisticated mechanisms for effective colonization of the intestinal tracts in various animal species. Although Campylobacter is fragile in the environment and requires fastidious growth conditions, it exhibits great flexibility in the adaptation to various habitats including the gastrointestinal tract. This high adaptability is attributable to its genetically, metabolically and phenotypically diverse population structure and its ability to change in response to various challenges. Unlike other enteric pathogens, such as Escherichia coli and Salmonella, Campylobacter is unable to utilize exogenous glucose and mainly depends on the catabolism of amino acids as a carbon source. Campylobacter proves highly mutable in response to antibiotic treatments and possesses eukaryote-like dual protein glycosylation systems, which modify flagella and other surface proteins with specific sugar structures. In this review we will summarize the distinct biological traits of Campylobacter and discuss the potential biotechnological approaches that can be developed to control this enteric pathogen. [source] Developmental adaptation: Where we go from here,AMERICAN JOURNAL OF HUMAN BIOLOGY, Issue 5 2009A. Roberto Frisancho The concept of developmental adaptation is a powerful framework that can be used for understanding the origin of population differences in phenotypic and genotypic biological traits. There is great deal of information describing how developmental responses can shape adult biological outcomes. Specifically, current research suggest that individuals developing in stressful environments such as high altitude will attain an adult enlarged residual lung volume that contribute to the successful cardiovascular adaptation of the high-altitude Andean native. Likewise, studies on the etiology of the metabolic syndrome indicate that development under poor nutritional environments elicit efficient physiological and metabolic responses for the utilization of nutrients and energy, which become disadvantageous when the adult environmental conditions provide abundant access to food and low energy expenditure. Epigenetic research in experimental animals and retrospective research in humans confirm that environmental influences during developmental period have profound consequences on the phenotypic expression of biological and behavioral traits during adulthood. Research on epigenetics is a productive direction for human biologists concerned with understanding the origins of human biological variability. Am. J. Hum. Biol., 2009. © 2009 Wiley-Liss, Inc. [source] Using biological traits to assess how urbanization filters plant species of small woodlandsAPPLIED VEGETATION SCIENCE, Issue 4 2010Jeanne Vallet Abstract Question: Which biological traits (persistence, regeneration, dispersion traits and resource requirements) may explain the distribution of woodland flora along an urban,rural gradient? Location: The study was carried out in three medium-sized conurbations of north-western France: Angers, Nantes and Rennes. Methods: We sampled the vegetation of 36 small woodlands of about 1.5 ha composed of non-planted vegetation along an urban,rural gradient. We characterized the position of woodlands along the urban,rural gradient by examining adjacent land cover. By using an ordination analysis (RLQ), we analysed which traits out of ,23 tested were related to the contrasted distribution of species along the urban,rural gradient. Results: Species that are more likely to be found in urban woodlands than rural woodlands have different persistence traits (higher specific leaf area, more often rosette or semi-rosette form, less underground vegetative multiplication), resource requirements (affinity for base-rich and fertile soils) and regeneration traits (short life-span). Dispersion traits were not related to the distribution of species along the urban,rural gradient. Conclusions: Our approach identifies traits that can help to determine the vulnerability of forest species as a result of the environmental changes that follow urbanization. Limiting the influence of the urban environment on habitat quality (particularly disturbance and soil enrichment) is likely to be of major importance in maintaining the plant biodiversity in woodlands. [source] Influence of dietary l -carnitine on growth, biological traits and meat quality in TilapiaAQUACULTURE RESEARCH, Issue 12 2009Shuenn-Der Yang Abstract This study was designed to determine whether l -carnitine supplementation is necessary in a tilapia diet containing low-fish meal and a high lipid level, which is beneficial economically and for the environment. The effects of dietary l -carnitine on the growth, body composition, blood traits and post-thaw drip from muscle in hybrid tilapia were investigated. Five isonitrogenous and isocaloric diets were fed to the fish with a mean body weight of 141.7 g for 168 days. The control diet contained fish meal as the major protein source with 7% lipid. Other diets contained 7% or 12% lipid, in which fish meal was largely replaced by plant proteins, and supplemented with l -carnitine or not. Results showed that supplemental dietary l -carnitine did not affect the growth performance, feed efficiency or protein efficiency ratio, while the supplementation significantly reduced the mesenteric fat ratio. Whole body and muscle proximate compositions were unaltered by any dietary treatment. The total plasma lipid, triacylglycerol and cholesterol values of tilapia fed diets with alternative plant proteins were significantly lower than those of the control fish, whereas increasing the dietary lipid content increased the aforementioned blood traits. A decrease in plasma ammonia and an increase in urea were observed in dietary l -carnitine-supplemented fish. Post-thaw drip from muscle was reduced in fish fed supplemental dietary l -carnitine. The observations of this study revealed that neither the growth performance nor the feed utilization of hybrid tilapia was improved by a dietary l -carnitine treatment, but that it did lead to a reduced mesenteric fat ratio, altered nitrogen metabolism and improved meat quality. [source] Dynamic network rewiring determines temporal regulatory functions in Drosophilamelanogaster development processesBIOESSAYS, Issue 6 2010Man-Sun Kim Abstract The identification of network motifs has been widely considered as a significant step towards uncovering the design principles of biomolecular regulatory networks. To date, time-invariant networks have been considered. However, such approaches cannot be used to reveal time-specific biological traits due to the dynamic nature of biological systems, and hence may not be applicable to development, where temporal regulation of gene expression is an indispensable characteristic. We propose a concept of a "temporal sequence of network motifs", a sequence of network motifs in active sub-networks constructed over time, and investigate significant network motifs in the active temporal sub-networks of Drosophila melanogaster. Based on this concept, we find a temporal sequence of network motifs which changes according to developmental stages and thereby cannot be identified from the whole static network. Moreover, we show that the temporal sequence of network motifs corresponding to each developmental stage can be used to describe pivotal developmental events. [source] | |||||||||||||