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Biofilm Samples (biofilm + sample)
Selected AbstractsBiofilms in the Edentulous Oral CavityJOURNAL OF PROSTHODONTICS, Issue 5 2008Amit Sachdeo BDS, DMSc Abstract Purpose: The oral cavity presents numerous surfaces for microbial colonization. These surfaces produce biofilms of differing complexities unique to each individual. Several studies have looked at biofilms in dentate patients. There has been limited research regarding biofilms on dentures or soft tissues of edentulous patients. The purpose of the present investigation was to provide meaningful data describing microbial ecological relationships in the oral cavity of edentulous patients and to evaluate the microbiota on hard and soft tissue surfaces and saliva in edentulous patients wearing complete dentures. Materials and Methods: Sixty-one edentulous subjects with complete maxillary and mandibular dentures were recruited. "Supragingival" biofilm samples were taken from 28 denture teeth for each subject. Biofilm samples were also taken from the dorsal, lateral, and ventral surfaces of the tongue, floor of mouth, buccal mucosa, hard palate, vestibule/lip, "attached gingiva," and saliva. Samples were individually analyzed for their content of 41 bacterial species using checkerboard DNA,DNA hybridization. Levels and proportions of each species were determined for every sample location. Results: Periodontal pathogens such as Aggregatibacter actinomycetemcomitans and Porphyromonas gingivalis were clearly present in the samples from the edentulous subjects. Microbial profiles in samples from the soft tissue surfaces differed among site locations. Samples from the dorsum of the tongue exhibited the highest bacterial counts followed by the "attached gingiva" and the lateral surfaces of the tongue, while the lowest mean counts were found in samples from the buccal mucosa and labial vestibules. Using cluster analysis of the proportions of the test species, three clusters were formed. The first cluster comprised saliva, supragingival plaque, and the lateral and dorsal surfaces of the tongue. The second cluster comprised the other six soft tissue surfaces. Species on the denture palate formed a third cluster. Conclusions: One of the major findings in this study was the detection of periodontal pathogens, A. actinomycetemcomitans and P. gingivalis, in the edentulous subjects, as these species were thought to disappear after removal of all natural teeth. This finding has implications regarding future dental treatment and the general health of individuals. Distinct patterns of microbial colonization were seen on the different soft tissue surfaces. Thus, this investigation provided the first step in defining the organisms that are associated with edentulous patients on both soft (mucosa) and hard surfaces (denture). The study also provided meaningful data that described microbial ecological relationships in the oral cavity of edentulous subjects. The authors believe that this study is the first comprehensive assessment of the microbiota in the complete denture-wearing subject. [source] Effect of an enamel matrix protein derivative (Emdogain®) on ex vivo dental plaque vitalityJOURNAL OF CLINICAL PERIODONTOLOGY, Issue 11 2001Anton Sculean Abstract Background: A common clinical observation following surgical periodontal therapy with an enamel matrix derivative (Emdogain®) is the improved healing of the soft tissues and the limited inflammation of the operated areas. These clinical observations are empirical and difficult to explain. One of the factors influencing the early wound healing might be a potential antimicrobial effect of Emdogain®. Aim: To investigate the effect of Emdogain® on the vitality of ex vivo supragingival dental plaque and to compare this effect to that of a standard 0.2% chlorhexidine solution. Materials and Methods: 24 patients suffering from adult periodontitis were included in the study. At the beginning of the experiment, all participants were given a professional tooth cleaning. For the following 4 days, they had to refrain from any kind of oral hygiene measures. At day 5, from each of the volunteers, a voluminous plaque biofilm sample was taken with a sterile curette from the vestibular surfaces of the 1st lower molars and divided into 5 equal parts. Each part was mounted with 5 ,l of the following solutions: (1) NaCl, (2) enamel matrix derivative dissolved in water (EMD), (3) enamel matrix derivative dissolved in the vehicle (Emdogain®), (4) vehicle (propylene glycol alginate, PGA), (5) 0.2% chlorhexidine digluconate (CHX). After a reaction time of 2 min the test solutions were sucked off, and subsequently the biofilm was stained with a fluorescence dye. The vitality of the plaque flora after the treatments was evaluated under the fluorescence microscope (VF%). Results: Plaque samples treated with NaCl showed a mean vitality of 76.8±8%. The EMD, Emdogain®, PGA and CHX showed VF values of 54.4±9.2, 21.4±10.6%, 19.6±11.6% and 32.3±11.8%, respectively. Emdogain®, PGA and CHX showed statistically highly significant reductions (p<0.0001) in terms of bacteria vitality when compared to water (negative control) and EMD. Both Emdogain® and PGA were found to be statistically significantly different compared to CHX (p<0.001) (positive control). Conclusion: The results of this study indicate that Emdogain® might have an antibacterial effect on the vitality of the ex vivo supragingival dental plaque flora. Zusammenfassung Hintergrund: Eine allgemeine klinische Beobachtung nach parodontalchirurgischer Therapie mit einem Schmelzmatrixderivat (Emdogain®) ist die verbesserte Heilung des Weichgewebes und die begrenzte Entzündung des operierten Gebietes: Diese klinischen Beobachtungen sind empirisch und schwierig zu erklären. Ein Faktor, der die frühe Wundheilung beeinflusst, könnte ein potentieller antimikrobieller Effekt von Emdogain® sein. Ziel: Untersuchung des Effektes von Emdogain® auf die Vitalität von ex vivo supragingivaler dentaler Plaque und Vergleich dieses Effektes zu demjenigen einer Standard 0.2%igen Chlorhexidinlösung. Material und Methoden: 24 Patienten, die an einer Erwachsenen-Parodontitis litten, wurden in diese Studie aufgenommen. Zu Beginn der Studie wurde bei allen Teilnehmern eine professionelle Zahnreinigung durchgeführt. An den folgenden 4 Tagen wurden keine oralen Hygienemaßnahmen erlaubt. Am Tag 5 wurde von jedem Teilnehmer eine voluminöse Plaquebiofilmprobe mit einer sterilen Kürette von der vestibulären Oberfläche des ersten unteren Molaren genommen und in 5 gleiche Teile aufgeteilt. Jeder Teil wurde mit 5 ,l der folgenden Lösungen gemischt: (1) NaCl, (2) Schmelzmatrixderivat in Wasser gelöst (EMD), (3) Schmelzmatrixderivat in einem Vehikel gelöst (Emdogain®), (4) Vehikel (Propylenglycolalginat, PGA), (5) 0.2%iges Chlorhexidindiglukonat (CHX). Nach einer Reaktionszeit von 2 Minuten wurden die Testlösungen aufgesaugt und folgend der Biofilm mit Fluoreszenzfarbstoff gefärbt. Die Vitalität der Plaqueflora nach den Behandlungen wurde unter dem Vitalfluoreszenzmikroskop (VF%) evaluiert. Ergebnisse: Die Plaqueproben, die mit NaCl behandelt wurden, zeigten eine mittlere Vitalität von 76.8±8%. Das EMD, Emdogain®, PGA und CHX zeigten VF Werte von 54.4±9.2%, 21.4±10.6%, 19.6±11.6% und 32.3±11.8%. Emdogain®, PGA und CHX zeigten statistisch signifikant höhere Reduktionen (p<0.0001) in Beziehung zur bakteriellen Vitalität, wenn zu Wasser (negative Kontrolle) und EMD verglichen wurde. Sowohl Emdogain® und PGA waren statistisch signifikant unterschiedlich zu CHX (p<0.0001) (positive Kontrolle). Schlussfolgerung: Die Ergebnisse dieser Studie zeigten, dass Emdogain® einen antibakteriellen Effekt auf die Vitalität von supragingivaler dentaler ex vivo Plaqueflora haben könnte. Résumé Origine: Une observation clinique courante durant un traitement parodontal chirurgical à l'aide de protéines de la matrice améllaire (Emdogain®) est une meilleure guérison des tissus mous et une inflammation moindre. Ces observations cliniques sont empiriques et difficiles à expliquer. Un des facteurs influençant la guérison précoce peut être un effet antimicrobien de l'EMD. But: Le but de cette étude a été d'évaluer l'effet de l'Emdogain® sur la vitalité de la plaque dentaire sus-gingivale ex vivo et de comparer cet effet avec une solution de chlorhexidine 2%. Matériaux et Méthodes: 24 patients souffrant de parodontite de l'adulte ont été inclus dans cette étude. Au début de l'expérience, tous les participants ont recu un nettoyage dentaire professionnel. Pendant les 4 journées suivantes, ils ont dû arrêté toute hygiène buccale. Au jour 5, une quantité de plaque dentaire volumineuse a étééchantillonné des surfaces vestibulaires des premières molaires inférieures de chaque volontaire à l'aide d'une curette stérile et divisée en 5 parts égales. Chaque partie a été montée avec 5 ,l des solutions suivantes: (1) NaCl, (2) EMD: dérivé de la matrice améllaire dissout dans l'eau (3) Emdogain®: dérivé de la matrice améllaire dissout dans son véhicule, (4) PGA: le véhicule propylène glycol alginate, (5) CHX: chlorhexidine 0.2%. Après un temps de réaction de 2 min, les solutions tests ont été aspirées et le biofilm dentaire a été imprégné d'un colorant de fluorescence. La vitalité de la flore de la plaque dentaire après ces traitements a étéévaluée sous microscopie à fluorescence (VF%). Résultats: Les échantillons de plaque traités avec NaCl possèdaient une vitalité moyenne de 76.8±8%. L'EMD, Emdogain®, PGA, et CHX avaient des valeurs VF respectives de 54.4±9.2%, 21.4±10.6%, 19.6±11.6% et 32.3±11.8%. Emdogain®, PGA, et CHX réduisaient la vitalité bactérienne de manière très hautement significative (p<0.0001) lorsque ces solutions étaient comparées aux contrôle négatif NaCl et à EMD. Tant Emdogain® que PGa étaient différents comparés au contrôle positif CHX (p<0.001). Conclusions: Les résultats de cette étude indiquent que Emdogain® pourrait avoir un effet antibactérien sur la vitalité de la flore se trouvant dant la plaque dentaire sus-gingivale ex vivo. [source] Factors affecting human supragingival biofilm composition.JOURNAL OF PERIODONTAL RESEARCH, Issue 4 2009Background and Objective:, Little is known about the factors that affect the microbial composition of supragingival biofilms. This study was designed to examine the relationship between total DNA probe counts of supragingival biofilm samples, clinical parameters and supragingival biofilm composition. Material and Methods:, Supragingival plaque samples were taken from 187 systemically healthy adult subjects (n = 4745 samples). All samples were individually analyzed for their content of 40 bacterial species using checkerboard DNA,DNA hybridization. The relationship between total DNA probe counts and microbial composition was examined by subsetting the data into 10 groups based on 10 percentile increments of the total DNA probe counts. Differences among groups in terms of species counts and proportions were sought, as well as relationships of total plaque DNA probe count and clinical parameters. Results:, There was a wide distribution in mean total DNA probe counts among the 187 subjects. With increasing total plaque levels there was a change in the proportions of individual species and microbial complexes. ,Small plaques' were characterized by high proportions of species in the yellow, orange, purple and ,other' complexes; plaques of moderate mass were characterized by high proportions of Actinomyces and purple complex species, while ,large plaques' exhibited increased proportions of green and orange complex species. Measures of gingival inflammation, pocket depth and recession were significantly positively associated with total DNA probe counts. Increased plaque numbers were related to increased pocket depth irrespective of presence or absence of gingival inflammation. Conclusion:, The proportions of individual species and microbial complexes in supragingival biofilms are influenced by the total numbers of organisms in the biofilm. [source] The relationship between periodontal disease and preterm low birthweight: clinical and microbiological resultsJOURNAL OF PERIODONTAL RESEARCH, Issue 6 2008M. V. Vettore Background and Objective:, Findings on the effect of periodontal disease on preterm low birthweight are inconclusive. The objective of this study was to compare periodontal clinical measures and the levels and proportions of 39 bacterial species in subgingival biofilm samples in puerperal women with preterm low birthweight and nonpreterm low birthweight. Material and Methods:, A case-control study with 116 postpartum women over 30 years of age was conducted. Four case groups of subjects with preterm and/or low birthweight [preterm (n = 40), low birthweight (n = 35), preterm and/or low birthweight (n = 50) and preterm and low birthweight (n = 25)] were compared with normal nonpreterm low-birthweight controls (n = 66). Periodontal clinical parameters of dental plaque, calculus, bleeding on probing, periodontal pocket depth and clinical attachment level were recorded. Covariates included socio-demographic and anthropometric characteristics, smoking, alcohol consumption, obstetric history, prenatal care and diseases during pregnancy. Two subgingival biofilm samples per women were analyzed for 39 bacterial species using a checkerboard DNA,DNA hybridization technique. Results:, The mean periodontal pocket depth was significantly higher in nonpreterm low-birthweight controls than in subjects in the preterm low birthweight, preterm and/or low birthweight, and preterm and low-birthweight groups. Clinical attachment level measures were not different between all pairs of cases and control groups. Groups did not differ with respect to the mean proportions of different microbial complexes. The mean counts of Treponema socranskii were lower in all case groups compared with the control group. Conclusion:, Maternal periodontal microbiota and clinical characteristics of periodontal disease were not associated with having preterm low-birthweight babies. [source] Biofilms in the Edentulous Oral CavityJOURNAL OF PROSTHODONTICS, Issue 5 2008Amit Sachdeo BDS, DMSc Abstract Purpose: The oral cavity presents numerous surfaces for microbial colonization. These surfaces produce biofilms of differing complexities unique to each individual. Several studies have looked at biofilms in dentate patients. There has been limited research regarding biofilms on dentures or soft tissues of edentulous patients. The purpose of the present investigation was to provide meaningful data describing microbial ecological relationships in the oral cavity of edentulous patients and to evaluate the microbiota on hard and soft tissue surfaces and saliva in edentulous patients wearing complete dentures. Materials and Methods: Sixty-one edentulous subjects with complete maxillary and mandibular dentures were recruited. "Supragingival" biofilm samples were taken from 28 denture teeth for each subject. Biofilm samples were also taken from the dorsal, lateral, and ventral surfaces of the tongue, floor of mouth, buccal mucosa, hard palate, vestibule/lip, "attached gingiva," and saliva. Samples were individually analyzed for their content of 41 bacterial species using checkerboard DNA,DNA hybridization. Levels and proportions of each species were determined for every sample location. Results: Periodontal pathogens such as Aggregatibacter actinomycetemcomitans and Porphyromonas gingivalis were clearly present in the samples from the edentulous subjects. Microbial profiles in samples from the soft tissue surfaces differed among site locations. Samples from the dorsum of the tongue exhibited the highest bacterial counts followed by the "attached gingiva" and the lateral surfaces of the tongue, while the lowest mean counts were found in samples from the buccal mucosa and labial vestibules. Using cluster analysis of the proportions of the test species, three clusters were formed. The first cluster comprised saliva, supragingival plaque, and the lateral and dorsal surfaces of the tongue. The second cluster comprised the other six soft tissue surfaces. Species on the denture palate formed a third cluster. Conclusions: One of the major findings in this study was the detection of periodontal pathogens, A. actinomycetemcomitans and P. gingivalis, in the edentulous subjects, as these species were thought to disappear after removal of all natural teeth. This finding has implications regarding future dental treatment and the general health of individuals. Distinct patterns of microbial colonization were seen on the different soft tissue surfaces. Thus, this investigation provided the first step in defining the organisms that are associated with edentulous patients on both soft (mucosa) and hard surfaces (denture). The study also provided meaningful data that described microbial ecological relationships in the oral cavity of edentulous subjects. The authors believe that this study is the first comprehensive assessment of the microbiota in the complete denture-wearing subject. [source] Endotoxin Level Measurement in Hemodialysis Biofilm Using "The Whole Blood Assay"ARTIFICIAL ORGANS, Issue 6 2005Karine Marion-Ferey Abstract:, Biofilms have been found on the inner surface of silicone tubing inside dialysis machines. Endotoxin releasing from those biofilms increases the bioincompatibility of dialysis liquids and leads to long-term inflammatory complications among dialysis patients. Endotoxin measurement is recommended for the control of dialysis liquids. This article describes the use of a new method, the Whole Blood Assay (WBA), for endotoxin quantification in dialysis biofilms. Biofilms were suspended in sterile water by scraping the tubing samples. Diluted blood samples from healthy donors were stimulated overnight with the contaminated suspension. Stimulated mononuclear cells released IL-1, in response to endotoxins. IL-1, level was then measured using an ultrasensitive ELISA method. We demonstrated a semilogarithmic model in which the optical densities measured after the ELISA assay increases linearly with the levels of endotoxin. This model allowed the determination of the amount of endotoxins in biofilm samples with a detection limit of 0.032 EU/mL. Most of the time, the amounts of endotoxin measured by the WBA were higher than those measured by the Limulus Amoebocyte Lysate (LAL) assay. This study suggested the presence of "endotoxin-like" compounds different from the lipopolysaccharides that are not detected by the LAL assay. We concluded that the LAL is necessary but insufficient to have a representative quantification of endotoxins that could be hazardous to patient health. [source] Carbon-nitrogen-phosphorus removal and biofilm growth characteristics in an integrated wastewater treatment system involving a rotating biological contactorASIA-PACIFIC JOURNAL OF CHEMICAL ENGINEERING, Issue 5 2009Angelo H. Cabije Abstract A new rotating biological contactor-packed media technology (RBC-PMT) is locally innovated using light polyethylene Amazon screen material as disc media. A single-stage co-current fed of this type, which is connected with a series of equalization tanks as an integrated wastewater treatment system (IWWTS), showed good carbon-nitrogen-phosphorus (C-N-P) removal and unveiled biofilm growth characteristics noteworthy for treating pollutants in wastewater. The equalization tanks approached facultative anaerobic conditions while the RBC-PMT exhibited a completely aerated system, both with a slightly alkaline pH, whose temperatures are ranging from 21 to 24 °C, and both performed as biological nutrient removal systems. The combined nutrient removal efficiency at high organic loading rate (HOLR) and low organic loading rate (LOLR) showed fair chemical oxygen demand (COD) removal at 65.68 and 67.89%, respectively. Nitrate-nitrogen removal demonstrated good removal at 79.17% at HOLR and 83.43% at LOLR. There was excellent phosphate-phosphorus removal determined at 91.64 and 94.35% at high and low OLRs, respectively. This indicates that increasing the organic loading rate decreases the C-N-P removal in the IWWTS. Biofilm growth was characterized by the selection and survival of microorganisms present under aerobic environmental conditions in the RBC-PMT system and their respective metabolism in removing C-N-P substrates. Yeasts, coliform bacteria particularly E. coli, Cyanobacteria, and benthic diatoms were dominant microorganisms found upon oil-immersion microscopy. Protozoans and algae including Chlorococcum, Chlorella, Diatoma, Tribonema, Oscillatoria, Euglena, and other motile rotifiers were also dominantly found in the biofilm samples. Biofilm growth is observed and its average thickness was measured to be 7.71 µm at HOLR and 2.81 µm at LOLR. Thicker biofilm at HOLR has caused the reduced rate of diffusion of the microorganisms and their metabolic products as manifested by the low C-N-P removal during HOLR. Copyright © 2009 Curtin University of Technology and John Wiley & Sons, Ltd. [source] Modified implant surfaces show different biofilm compositions under in vivo conditionsCLINICAL ORAL IMPLANTS RESEARCH, Issue 8 2009Birte Größner-Schreiber Abstract Objective: Plaque accumulation on implant surfaces can result in peri-implantitis with potential implant loss. The aim of the present study was to examine the influence of zirconium nitride (ZrN) as a potential implant surface on the biofilm composition and diversity in vivo. Material and methods: ZrN- or titanium (Ti)-coated glass specimens and ZrN or roughened Ti discs were used as substrates. Pure glass and polished titanium served as controls. The specimens were mounted on removable intraoral splints in five adults. After 24 h of intraoral exposure, the biofilms were analyzed applying single-strand conformation polymorphism (SSCP analysis) of 16S rRNA genes. Sequence analysis of the dominant bands excised from the SSCP fingerprints allowed to taxonomically describe bacteria derived from biofilm samples. Results: The highest number of bands was counted on pure glass and Ti 800. ZrN-coated glass and ZrN-coated titanium discs showed the lowest values for species richness. However, no significant differences were observed regarding the diversity of the identified bacterial species among all the surfaces examined. A total of 46 different bacteria were identified. The dominant bands within the fingerprints indicated bacteria belonging to the Streptococcus group as identified by their 16S rDNA sequence. Conclusion: A coating of glass surfaces with ZrN significantly reduced the species richness in early bacterial colonization but the diversity was not significantly changed. In consideration of the results obtained by this and former studies a ZrN coating appears to rather modify the quantity of early bacterial adherence than the quality of the microbial community structure. [source] | ||||||||||