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Bivalve Molluscs (bivalve + mollusc)
Selected AbstractsChronic fishing disturbance has changed shelf sea benthic community structureJOURNAL OF ANIMAL ECOLOGY, Issue 3 2000M. J. Kaiser Summary 1.,Bottom fishing using towed nets and dredges is one of the most widespread sources of physical disturbance to the continental shelf seas throughout the world. Previous studies suggest that degradation and ecosystem changes have occurred in intensively fished areas. Nevertheless, to date it has been difficult to attribute habitat and benthic community changes to fishing effort at a spatial scale that is truly representative of commercial fishing activities. 2.,In this study we present convincing evidence that chronic bottom-fishing disturbance has caused significant and widespread changes in the structure of two distinct soft-sediment benthic assemblages and habitats. 3.,Our study compared the benthic fauna found in areas that have been exposed to either high or low levels of bottom-fishing disturbance over the past 10 years. We were able to validate the fishing effort data in some areas using scars in the shells of a long-lived bivalve mollusc (Glycymeris glycymeris) which result from fishing disturbance. Shell scars occurred most frequently in bivalves collected from the area of highest fishing effort. 4.,Multivariate analyses and the response of abundance/biomass curves indicated that chronic fishing has caused a shift from communities dominated by relatively sessile, emergent, high biomass species to communities dominated by infaunal, smaller-bodied fauna. Removal of emergent fauna has thus degraded the topographic complexity of seabed habitats in areas of high fishing effort. The communities within these areas currently may be in an alternative stable state. [source] In Situ Measurement of Pinna nobilis Shells for Age and Growth Studies: A New DeviceMARINE ECOLOGY, Issue 3 2002José Rafael García-March Abstract. Pinna nobilis Linnaeus 1758 is an endemic bivalve mollusc in the Mediterranean Sea, where it inhabits seagrass meadows, especially Posidonia oceanica (L.) Delile. It is the largest bivalve in the Mediterranean, reaching lengths up to 120,cm. In its natural habitat, P. nobilis lives with the anterior part of the valve buried in the seabed, attached to Posidonia rhizomes by byssus threads. This habit makes it impossible to measure its total length directly in situ. As the only way to determine the individual age is the relationship between age and total length, several equations have been proposed to estimate total length by relating it to the unburied parts of the shell. Such measurements are essential to ecological studies that consider age, growth, and population dynamics, and that evaluate the environmental factors that affect this species. Accurately estimating total length depends on the accuracy and precision of the method employed to measure the unburied shell parts. In this paper, we point out the lack of precision of the instruments and methods used until now; we also demonstrate the reason for this imprecision. A new device to measure unburied parts of Pinna nobilis with a precision comparable to that obtained when measuring extracted valves is described. This device is unaffected by substratum type and reduces measurement time. The latter is a very important feature, because these procedures are usually performed whilst SCUBA diving. Finally, a growth equation has been fitted to the measurements obtained with the new device from a population located in Moraira (Alicante, western Mediterranean). [source] Two-step counterdiffusion protocol for the crystallization of haemoglobin II from Lucina pectinata in the pH range 4,9ACTA CRYSTALLOGRAPHICA SECTION F (ELECTRONIC), Issue 3 2010Carlos A. Nieves-Marrero Lucina pectinata haemoglobin II (HbII) transports oxygen in the presence of H2S to the symbiotic system in this bivalve mollusc. The composition of the haem pocket at the distal site includes TyrB10 and GlnE7, which are very common in other haem proteins. Obtaining crystals of oxyHbII at various pH values is required in order to elucidate the changes in the conformations of TyrB10 and GlnE7 and structural scenarios induced by changes in pH. Here, the growth of crystals of oxyHbII using the capillary counterdiffusion (CCD) technique at various pH values using a two-step protocol is reported. In the first step, a mini-screen was used to validate sodium formate as the best precipitating reagent for the growth of oxyHbII crystals. The second step, a pH screen typically used for optimization, was used to produce crystals in the pH range 4,9. Very well faceted prismatic ruby-red crystals were obtained at all pH values. X-ray data sets were acquired using synchrotron radiation of wavelength 0.886,Å (for the crystals obtained at pH 5) and 0.908,Å (for those obtained at pH 4, 8 and 9) to maximum resolutions of 3.30, 1.95, 1.85 and 2.00,Å for the crystals obtained at pH 4, 5, 8 and 9, respectively. All of the crystals were isomorphous and belonged to space group P42212. [source] On bivalve phylogeny: a high-level analysis of the Bivalvia (Mollusca) based on combined morphology and DNA sequence dataINVERTEBRATE BIOLOGY, Issue 4 2002Gonzalo Giribet Abstract. Bivalve classification has suffered in the past from the crossed-purpose discussions among paleontologists and neontologists, and many have based their proposals on single character systems. More recently, molecular biologists have investigated bivalve relationships by using only gene sequence data, ignoring paleontological and neontological data. In the present study we have compiled morphological and anatomical data with mostly new molecular evidence to provide a more stable and robust phylogenetic estimate for bivalve molluscs. The data here compiled consist of a morphological data set of 183 characters, and a molecular data set from 3 loci: 2 nuclear ribosomal genes (18S rRNA and 28S rRNA), and 1 mitochondrial coding gene (cytochrome c oxidase subunit I), totaling ,3 Kb of sequence data for 76 molluscs (62 bivalves and 14 outgroup taxa). The data have been analyzed separately and in combination by using the direct optimization method of Wheeler (1996), and they have been evaluated under 12 analytical schemes. The combined analysis supports the monophyly of bivalves, paraphyly of protobranchiate bivalves, and monophyly of Autolamellibranchiata, Pteriomorphia, Heteroconchia, Palaeoheterodonta, and Heterodonta s.l., which includes the monophyletic taxon Anomalodesmata. These analyses strongly support the conclusion that Anomalodesmata should not receive a class status, and that the heterodont orders Myoida and Veneroida are not monophyletic. Among the most stable results of the analysis are the monophyly of Palaeoheterodonta, grouping the extant trigoniids with the freshwater unionids, and the sister-group relationship of the heterodont families Astartidae and Carditidae, which together constitute the sister taxon to the remaining heterodont bivalves. Internal relationships of the main bivalve groups are discussed on the basis of node support and clade stability. [source] 41 Incidence of paralytic shellfish toxin in bivalve mollusc tissue from the oregon coastJOURNAL OF PHYCOLOGY, Issue 2003R. C. Everroad Saxitoxin and domoic acid sequestration by bivalve molluscs occurs periodically along the Oregon coast, presumably as a result of harmful algal blooms (HABs). Since 1958 and more continuously since 1979, the Oregon Shellfish Program (OSP) has assayed toxin levels in these molluscs as part of a monitoring program for paralytic (PSP) and amnesic (ASP) shellfish poisoning. We have created a working data base for all PSP sampling by the OSP between 1958 and 2001 and have examined the data for spatial and temporal trends in the appearance of toxin in shellfish, amount of toxin, and apparent duration of toxic events. In this report, we examine the data from the five stations with the longest record of continuous sampling (1979,2000) for evidence of correlation with El Niño events, upwelling, and/or a pattern of increasing frequency or intensity of toxic events. We also compare the pattern of appearance of toxin at open coast stations with the timing of first appearance of toxin in shellfish at adjacent estuarine stations. This is an important analysis because, in Oregon, shellfish closures due to PSP occur frequently in mussel beds on the open coast and the source of toxin-producing organisms is unknown. [source] Occurrence of Vibrio vulnificus in mussel farms from the Varano lagoon environmentLETTERS IN APPLIED MICROBIOLOGY, Issue 4 2010L. Beneduce Abtract Aims:, Monitoring the occurrence of the human pathogen Vibrio vulnificus in a mussel farm located in the lagoon of Varano (Italy). Methods and Results:, A total of 72 samples of mussel, water and sediment, collected from two locations of Varano lagoon in the Gargano peninsula, during a 7- month survey, were analysed. Isolation and PCR characterization of six V. vulnificus environmental genotype strains revealed that this pathogen was isolated when with T was above 22°C and salinity ranged between 22·7 and 26·4,. No significant correlation of the occurrence of V. vulnificus with water pH or salinity was observed. Moreover, 8% of mussel samples were found to be contaminated by V. vulnificus. All of that positive mussel samples originated from the same sampling station. Conclusion:, It is suggested that warmer season are risky to eat raw or undercooked bivalve molluscs in the local area. Significance and Impact of the Study:, To increase knowledge about environmental conditions that may affect the occurrence of waterborne pathogen Vibrio vulnificus in seafood. [source] Three nuclear genes for phylogenetic, SNP and population genetic studies of molluscs and other invertebratesMOLECULAR ECOLOGY RESOURCES, Issue 1 2010A. AUDZIJONYTE Abstract The study reports new primers capable of amplifying fragments from three nuclear protein-coding genes in a variety of deep-sea molluscs and annelids , adenine nucleotide translocase (Ant), calmodulin (Cal) and cyclophilin A (CycA). The Ant primers appear to be restricted to bivalve molluscs, whereas the Cal and CycA primers also amplified appropriate gene fragments from Lepetodrilus gastropod molluscs and Osedax polychaete worms. The amplified fragment of Cal contains an intron in the molluscs, but no intron was detected in the Ant and CycA fragments from any of the tested animals. DNA sequences generated by the three primer sets exhibited one to 15 single nucleotide polymorphism sites in deep-sea vesicomyid clams and Osedax boneworms. The observed levels of polymorphism indicate that the genes are likely to be useful in both population genetic and phylogenetic analyses of different invertebrate taxa. [source] Bivalve fishing and maerl-bed conservation in France and the UK,retrospect and prospectAQUATIC CONSERVATION: MARINE AND FRESHWATER ECOSYSTEMS, Issue S1 2003J.M. Hall-Spencer Abstract 1.Maerl beds are carbonate sediments, built by a surface layer of slow-growing coralline algae, forming structurally fragile habitats. 2.They are of international conservation significance, often supporting a high biodiversity and abundant bivalve molluscs. 3.Experimental fishing for scallops (Pecten maximus) on French and UK grounds has shown that although large epifauna are often killed, many organisms escape harm as they burrow deeply or are small enough to pass through the dredges. 4.Bivalve dredging is currently one of the main threats to European maerl grounds as it reduces their biodiversity and structural complexity and can lead to long-term degradation of the habitat. 5.Protecting maerl grounds is of importance for fisheries since they provide structurally complex feeding areas for juvenile fish (e.g. Atlantic cod - Gadus morhua) and reserves of commercial brood stock (e.g. Ensis spp., P. maximus and Venus verrucosa). 6.We outline improved mechanisms to conserve these ancient and unique biogenic habitats. Copyright © 2003 John Wiley & Sons, Ltd. [source] | ||||||||||