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Width
Kinds of Width Terms modified by Width Selected AbstractsEVOLUTION OF NICHE WIDTH AND ADAPTIVE DIVERSIFICATIONEVOLUTION, Issue 12 2004Martin Ackermann Abstract Theoretical models suggest that resource competition can lead to the adaptive splitting of consumer populations into diverging lineages, that is, to adaptive diversification. In general, diversification is likely if consumers use only a narrow range of resources and thus have a small niche width. Here we use analytical and numerical methods to study the consequences for diversification if the niche width itself evolves. We found that the evolutionary outcome depends on the inherent costs or benefits of widening the niche. If widening the niche did not have costs in terms of overall resource uptake, then the consumer evolved a niche that was wide enough for disruptive selection on the niche position to vanish; adaptive diversification was no longer observed. However, if widening the niche was costly, then the niche widths remained relatively narrow, allowing for adaptive diversification in niche position. Adaptive diversification and speciation resulting from competition for a broadly distributed resource is thus likely if the niche width is fixed and relatively narrow or free to evolve but subject to costs. These results refine the conditions for adaptive diversification due to competition and formulate them in a way that might be more amenable for experimental investigations. [source] A COMPARISON OF FIVE HYBRID ZONES OF THE WETA HEMIDEINA THORACICA (ORTHOPTERA: ANOSTOSTOMATIDAE): DEGREE OF CYTOGENETIC DIFFERENTIATION FAILS TO PREDICT ZONE WIDTHEVOLUTION, Issue 4 2003Mary Morgan-Richards Abstract Tension zones are maintained by the interaction between selection against hybrids and dispersal of individuals. Investigating multiple hybrid zones within a single species provides the opportunity to examine differences in zone structure on a background of differences in extrinsic factors (e.g., age of the zone, ecology) or intrinsic factors (e.g., chromosomes). The New Zealand tree weta Hemideina thoracica comprises at least eight distinct chromosomal races with diploid numbers ranging from 2n = 11 (XO) to 2n = 23 (XO). Five independent hybrid zones were located that involve races differing from one another by a variety of chromosomal rearrangements. The predicted negative correlation between extent of karyotypic differentiation (measured in terms of both percent of genome and number of rearrangements) and zone width was not found. Conversely, the widest zones were those characterized by two chromosome rearrangements involving up to 35% of the genome. The narrowest zone occurred where the two races differ by a single chromosome rearrangement involving approximately 2% of the genome. The five estimates of chromosomal cline width ranged from 0.5 km to 47 km. A comparative investigation of cline width for both chromosomal and mitochondrial markers revealed a complex pattern of zone characteristics. Three of the five zones in this study showed cline concordance for the nuclear and cytoplasmic markers, and at two of the zones the clines were also coincident. Zones with the widest chromosomal clines had the widest mitochondrial DNA clines. It appears that, even within a single species, the extent of karyotypic differentiation between pairs of races is not a good predictor of the level of disadvantage suffered by hybrids. [source] WIDTH OF STREAMS AND RIVERS IN RESPONSE TO VEGETATION, BANK MATERIAL, AND OTHER FACTORS,JOURNAL OF THE AMERICAN WATER RESOURCES ASSOCIATION, Issue 5 2004Russell J. Anderson ABSTRACT: An extensive group of datasets was analyzed to examine factors affecting widths of streams and rivers. Results indicate that vegetative controls on channel size are scale dependent. In channels with watersheds greater than 10 to 100 km2, widths are narrower in channels with thick woody bank vegetation than in grass lined or nonforested banks. The converse is true in smaller streams apparently due to interactions between woody debris, shading, understory vegetation, rooting characteristics, and channel size. A tree based statistical method (regression tree) is introduced and tested as a tool for identifying thresholds of response and interpreting interactions between variables. The implications of scale dependent controls on channel width are discussed in the context of stable channel design methods and development of regional hydraulic geometry curves. [source] MISSOURI RIVER FLOOD OF 1993: ROLE OF WOODY CORRIDOR WIDTH IN LEVEE PROTECTION,JOURNAL OF THE AMERICAN WATER RESOURCES ASSOCIATION, Issue 4 2003Stephen B. Allen ABSTRACT. We investigated the relationships between levee damage and woody corridor along a 353-mile segment of the Missouri River in Missouri during the flood of 1993. Results indicated that woody corridors between riverbanks and primary levees played a significant role in the reduction or prevention of flood related damage to levees. Forty-one percent of levee failures in this segment occurred in areas with no woody corridor, while 74 percent and 83 percent of failures occurred where woody corridor widths were less than 300 feet and less than 500 feet, respectively. Median failure lengths with a woody corridor present were 50.3 percent shorter than median failure lengths with no woody corridor present. Levees without failures had significantly wider median woody corridor widths than levees that failed. Eligibility for the Corps of Engineers levee maintenance program was not a significant factor in the reduction of levee damage. Discontinuities in woody corridors played a role in 27.5 percent of the levee failures in the study segment. Smaller segments of the river valley were studied to determine if geomorphic differences influenced variations in the protective value of woody corridors. [source] Correlation of Density Pedestal Width and Neutral Penetration LengthCONTRIBUTIONS TO PLASMA PHYSICS, Issue 1-3 2004X. Q. Xu Abstract Pedestal studies in DIII-D and MAST find good correlation between the width of the H-mode density barrier and the neutral penetration length [1, 2]. These results suggest that the width may be set by the combined effects of neutrals and plasma transport. This paper is a report on fluid simulations of boundary plasma using the BOUT code[3] with a neutral source added. Thus both neutral and plasma physics are treated. The plasma transport is self-consistently driven by boundary turbulence due to the resistive X-point mode, while neutrals are described by a simple analytic model. The plasma profiles are evolved on the same time scale as the turbulence for the given heat source from the core plasma and particle source from the neutrals. For prescribed neutral profiles, we find the formation of a density pedestal inside the separatrix in the L-mode even though the calculated plasma diffusion coefficients are almost radially constant and without the formation of a temperature pedestal. These results support the hypothesis that particle fueling can provide the dominant control for the size of the H-mode density barrier. The width of the density barrier decreases as the pedestal density increases which is also consistent with experimental data. (© 2004 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim) [source] Photoepilation Results of Axillary Hair in Dark-Skinned Patients by IPL: A Comparison Between Different Wavelength and Pulse WidthDERMATOLOGIC SURGERY, Issue 2 2006JONG HEE LEE MD BACKGROUND Recently, intense pulsed light (IPL) sources have been shown to provide long-term hair removal. OBJECTIVE This study examined the photoepilatory effects of different wavelengths and pulse width application in the same device and compared their efficiencies in Asian skin. METHODS Twenty-eight Korean women were treated using HR (600,950 nm filter) and 27 using HR-D (645,950 nm filter) in the axillar area. Four treatments were carried out at intervals of 4 to 6 weeks; follow-ups were conducted 8 months after the last treatment. Mean energy settings were 14.9±2.0 J/cm2 for HR and 17.1±0.6 J/cm2 for HR-D. Longer pulse widths were applied in case of HR-D treatment. Hair counts and photographic evaluation of skin sites were made at baseline and at the last follow-up. Final overall evaluations were performed by patients and clinicians. RESULTS Average clearances of 52.8% and 83.4% were achieved by HR and HR-D, respectively. No significant adverse effects were reported after HR-D treatment. One case each of hypopigmentation and hyperpigmentation was reported for HR. CONCLUSION An IPL source by removing 45 nm of the emitted spectra and applying longer pulse width was found to provide a safer and more effective means of photoepilation in Asian patients. [source] The Effects of Variable Pulse Width of Er:YAG Laser on Facial SkinDERMATOLOGIC SURGERY, Issue 4 2001Khalil A. Khatri MD Background. The use of CO2 and Er:YAG lasers for resurfacing has increased significantly in the past few years. Er:YAG laser causes pinpoint bleeding during and after treatment with a typical pulse width of 250 ,sec. A longer pulse of Er:YAG laser can potentially coagulate dermal blood vessels and increase the residual thermal damage (RTD). Objective. To evaluate the effects of various pulse durations of Er:YAG laser on the depth of RTD and bleeding. Methods. The preauricular skin of a volunteer was exposed to Er:YAG laser at 250-, 350-, and 700-,sec pulse durations, with a fluence of 5 J/cm2. The number of passes varied between 6 and 16. The treated skin was excised and a histologic evaluation was done. Results. The maximum depth of RTD was 50 ,m and there was decreased bleeding with a 700-,sec pulse duration. Conclusion. The increased pulse duration of Er:YAG laser of 700 ,s does not increase the maximum reported RTD and therefore would not change the recovery time and may have a beneficial effect on hemostasis. [source] Direct observation of frost wedging in alpine bedrockEARTH SURFACE PROCESSES AND LANDFORMS, Issue 6 2001Norikazu Matsuoka Abstract Width and temperature of rock joints were automatically monitored in the Japanese Alps. Three years of monitoring on a sandstone rock face shows two seasonal peaks of joint widening in autumn and spring. The autumn events are associated with short-term freeze,thaw cycles, and the magnitude of widening reflects the freezing intensity and water availability. The short-term freezing can produce wedging to a depth of at least 20,cm. The spring events follow a rise in the rock surface temperature to 0,°C beneath the seasonal snowcover, and likely originate from refreezing of meltwater entering the joint. Some of these events contribute to permanent enlargement of the joint. Two other joints on nearby rock faces experience only sporadic widening accompanying freeze,thaw cycles and insignificant permanent enlargement. Observations indicate that no single thermal criterion can explain frost weathering. The temperature range at which wedging occurs varies with the bedrock conditions, water availability and duration of freezing. Copyright © 2001 John Wiley & Sons, Ltd. [source] Effect of depth and width of cultivation and sowing date on establishment of red clover (Trifolium pratense L.) by rotary slot-seeding into grasslandGRASS & FORAGE SCIENCE, Issue 2 2010P. Komárek Abstract The effect of different combinations of time of sowing and depth and width of soil cultivation using a rotary slot-seeding machine to introduce red clover (Trifolium pratense) was determined for some characteristics of newly established red clover plants in a lowland Dactylis glomerata -dominated grassland in the Czech Republic. Sowing was carried out on four sowing dates in one growing season: 11 May; 21 June (after the first cut); 9 August (after the second cut); and 19 September. The experimental treatments consisted of all combinations of four depths (5, 10, 15 and 20 cm) and four widths (5, 10, 15 and 20 cm) of soil cultivation. Measurements were made of number of plants, weight and height of plants, weight and height of roots. Measurements at 2 months after sowing showed fewer seedlings for the 11 May sowing than for later sowing dates. The number of red clover plants increased as the row width was increased up to 15 cm, regardless of the depth of slot. Positive effects of slot width on weight and height of plants and weight and length of roots were recorded. A highly positive correlation was found between weight of plants and weight of roots. Width of row was the key factor for the successful establishment of seedlings into the existing sward by slot-seeding. A row width of 10 cm and depth of slot of 5 cm was considered a satisfactory combination. [source] Bizygomatic breadth determination in damaged skullsINTERNATIONAL JOURNAL OF OSTEOARCHAEOLOGY, Issue 5 2010C. L. Oskam Abstract Metric and discriminant function analyses of the skull have been used successfully to determine ancestry and sex from human skeletal remains in both forensic and archaeological contexts. However, skulls are frequently discovered in damaged condition. One structure that is commonly fragmented, even when the rest of the skull is preserved, is the zygomatic arch. The bizygomatic width is an important measurement in craniometry and in forensic facial reconstruction for determining facial width; therefore we propose a simple linear regression model to predict the bizygomatic width of skulls with damaged zygomatic arches. Thirty-one adult skulls originating from the Indian sub-continent were used to measure the bizygomatic width. Then, on the same skulls, a straight steel wire was placed at the superior surface of the temporal and zygomatic origins of the zygomatic arch to simulate the zygomatic arch reconstruction on damaged skulls. These wire measurements were used to fit a simple linear regression model between the bizygomatic widths and the wire measurements, and the estimated regression model; Bizygomatic Width (bone),=,0.61,+,1.02(wire measurement), has a very high R2 value of 0.91. Hence, this model could effectively be used to predict bizygomatic widths based on wire measurements. In addition, the bizygomatic widths and wire measurements were collected from 14 New Zealand European skulls to test the ability of the regression model to determine bizygomatic widths from different ethnic groups. This model accurately predicted the bizygomatic widths in New Zealands of European origin skulls and therefore suggests that this regression model could be used for other ethnic groups. The importance of the bizygomatic width for craniometric analysis makes this regression model particularly useful for analysing archaeological samples. Furthermore, this regression line can be used in the field of forensic facial reconstruction to reconstruct damaged zygomatic arches prior to facial reconstructions. Copyright © 2009 John Wiley & Sons, Ltd. [source] Intravenous Bisphosphonate Therapy Increases Radial Width in Adults With Osteogenesis Imperfecta,JOURNAL OF BONE AND MINERAL RESEARCH, Issue 8 2005Davide Gatti Abstract Neridronate therapy in adult patients with OI significantly increases the cross-sectional area of the proximal radius. This observation may provide an additional explanation for the antifracture efficacy of bisphosphonates. Introduction: Bisphosphonate therapy decreases by 70-90% the fracture risk in patients with osteogenesis imperfecta (OI). This decrease is somewhat greater than that expected from the BMD changes, supporting the hypothesis that bisphosphonate therapy is associated with structural changes, not detectable by BMD measurements. Materials and Methods: To explore this hypothesis, pQCT measurements at the nondominant radius were obtained in a group of adult OI patients participating in a randomized clinical trial with neridronate. Results: The total volumetric BMD of the ultradistal radius rose significantly in patients treated with neridronate and calcium + vitamin D (neridronate group) compared with patients treated with calcium + vitamin D alone (control group). No significant differences were observed in trabecular BMD and in volumetric cortical density in either group. In the neridronate group, the cross-sectional area rose significantly versus both baseline values and the control group. These latter changes were associated with ,20% increases in bending breaking resistance index (BBRI). Conclusion: Our observation, if extended to postmenopausal osteoporosis, may provide a new explanation for the fracture risk reduction observed in osteoporotic patients treated with bisphosphonates. [source] Correlation between the Individual and the Combined Width of the Six Maxillary Anterior TeethJOURNAL OF ESTHETIC AND RESTORATIVE DENTISTRY, Issue 3 2009LUIZ CARLOS GONÇALVES DMD ABSTRACT Purpose:, There is a consensus in the community of dental research that the selection of undersized artificial maxillary anterior teeth offers an unnatural appearance to the denture. Several methods to select the adequate width of these teeth are of questionable validity, and many dentures have an obviously artificial appearance. This article assessed the relationship between the individual and the combined width of maxillary anterior teeth. Materials and Methods:, Impressions were made of the anterior dentition of 69 dentate undergraduate students with rubber impression silicon, and casts were formed. The individual widths of the maxillary anterior teeth were measured by using a digital caliper (SC-6 digital caliper, Mitutoyo Corporation, Tokyo, Japan), and the combined width was registered by both adding the individual width and using a flexible millimeter ruler. Results:, Student's t -test showed significant differences between the analogous teeth and different sides of the maxillary dental arch (p = 0.001), with the exception of the central incisor (p = 0.984). Pearson's product moment correlation coefficient showed significant positive correlation between all the measurements compared (p = 0.000). Linear regression analysis concluded three mathematical equations to obtain the individual tooth width after measuring the combined width of the six maxillary anterior teeth by using a flexible millimeter ruler. Conclusions:, The individual tooth width can be determined if the combined width of the maxillary anterior teeth is obtained by using a flexible millimeter ruler. CLINICAL SIGNIFICANCE The adequate selection of each maxillary anterior tooth width can offer variance and individuality to the denture, particularly for partially dentate patients. By offering an adequate tooth-to-tooth relationship, the esthetic result of the oral rehabilitation treatment can be improved. [source] Two stage growth of microdiamond in UHP dolomite marble from Kokchetav Massif, KazakhstanJOURNAL OF METAMORPHIC GEOLOGY, Issue 6 2003H. Ishida Abstract The abundance and morphology of microdiamond in dolomite marble from Kumdy-kol in the Kokchetav Massif, are unusual; a previous study estimated the maximum content of diamonds in dolomite marble to be about 2700 carat ton,1. Microdiamond is included primarily in garnet, and occasionally in diopside and phlogopite pseudomorphs after garnet. They are classified into three types on the basis of their morphology: (1) S-type: star-shaped diamond consisting of translucent cores and transparent subhedral to euhedral very fine-grained outer parts; (2) R-type: translucent crystals with rugged surfaces; and (3) T-type: transparent, very fine-grained crystals. The S-type is the most abundant. Micro-Laue diffraction using a 1.6-µm X-ray beam-size demonstrated that the cores of the star-shaped microdiamond represent single crystals. In contrast, the most fine-grained outer parts usually have different orientations compared to the core. Laser,Raman studies indicate that the FWHM (Full Width at Half Maximum) of the Raman band of the core of the S-type diamond is slightly larger than that for the outer parts. Differences in morphology, crystal orientations, and in the FWHM of the Raman band between the core and the fine-grained outer-parts of S-type microdiamond suggest that the star-shaped microdiamond was formed discontinuously in two distinct stages. [source] Genetic loci influencing natural variations in femoral bone morphometry in mice,JOURNAL OF ORTHOPAEDIC RESEARCH, Issue 4 2001Thomas A. Drake This study identifies genetic loci affecting femoral bone length and width measures in mature mice. Sixteen month old female F2 progeny of a C57BL/6J and DBA/2J intercross were examined for femur length and width of the femoral head, intertrochanteric region and three locations of the diaphysis using digitized images of femur radiographs obtained in the anterior-posterior and lateral projections. A genome wide linkage map was constructed using microsatellite markers at an average density of 20 cM, and quantitative trait locus analysis used to identify regions of the genome showing linkage with the traits measured. Femur length showed significant linkage with loci on proximal chromosome 3 (lod 6.1), and suggestive linkage with a locus on chromosome 14. A major locus on mid-chromosome 7 controlled width of the diaphysis (lod 6.8). Other loci were identified on chromosomes 2 and 4. Width at the intertrochanteric region had suggestive linkage with loci on chromosomes 6 and 19. No loci were found with linkage for width of the femoral head. Candidate genes related to bone development or metabolism are present at most of these loci. These findings show that genetic regulation of femoral bone morphology is complex, and are consistent with the distinct biologic processes that control longitudinal and lateral growth of the femur. © 2001 Orthopaedic Research Society. Punlished by Elsevier Science Ltd. All rights reserved. [source] The effects of multiple passes on the epidermal thermal damage pattern in nonablative fractional resurfacing,LASERS IN SURGERY AND MEDICINE, Issue 2 2009Dieter Manstein MD Background and Objective Nonablative fractional resurfacing is a concept of cutaneous re-modeling whereby laser-induced microscopic treatment zones (MTZs) are surrounded by normal viable tissue. Such thermal damage pattern with a small diameter of individual lesions allows fast re-epithelialization with minimal side effects. The purpose of this in vitro study was to determine the fraction of thermal injury per unit surface area (fill factor) and lesion size in relation to pulse energy and number of passes. Methods Full thickness abdominal skin samples were exposed ex vivo to the Fraxel SR 750 laser (Reliant Technologies, Mountain View, CA). One set of exposures was performed for pulse energies in the range of 8 to 40 mJ for a single pass at 250 MTZ/cm2. A second set of exposures was performed at 10 mJ with number of passes from 1 to 30. The thermal damage pattern was assessed by incubation of epidermal sheets with NitroBlueTetrazoliumChloride (NBTC) stain. Size of individual MTZ and fill factor were determined by image analysis (ImageJ, NIH, Bethesda, MD) of digital micrographs. Results Width of the thermal injury zone was directly related to the pulse energy used. The fill factor did not have a uniform relationship with the number of passes. Due to the stochastic placement of individual MTZs, even for greater number of passes, some residual undamaged tissue was found. Due to formation of thermal damage clusters, defined as overlapping individual MTZs, the size of the resulting clustering lesions which we defined as microscopic treatment cluster (MTC) increased linearly as a function of the number of passes. Conclusion We have described the fill factor as it relates to the number of passes and have demonstrated that the average size of individual lesions depends on the number of passes. Clustering of MTZs lead to the development of MTC, the average size of which increased with the number of passes. The clinical implications of these findings are contingent on further studies. Lasers Surg. Med. 41:149,153, 2009. © 2009 Wiley-Liss, Inc. [source] A Computer-Based Method for Determination of the Cell-Free Layer Width in MicrocirculationMICROCIRCULATION, Issue 3 2006SANGHO KIM ABSTRACT Objectives: The cell-free layer between the erythrocyte column and the vessel wall is an important determinant of hydrodynamic resistance in microcirculatory vessels. The authors report a method for continuous measurement of the width of this layer. Methods: The light intensity of a linear array of pixels perpendicular to the vessel axis is continuously determined from a video image of a microcirculatory vessel. A threshold level based on Otsu's method is used to establish the interface between the cell-free layer and the erythrocyte column. To test the method, video images at 750,4500 frames/s were obtained from venules and arterioles in rat spinotrapezius muscle at normal and reduced arterial pressures before and after induction of erythrocyte aggregation with Dextran 500. The current measurements were compared to manual measurements of the same images. Results: Values obtained by the manual and the new methods were in agreement within the 95% confidence limit by the Bland-Altman analysis and within 90,95% range by the correlation coefficient (R2). The more frequent measurements reveal substantial, rapid variations in cell-free layer width and changes in mean values with alteration of arterial pressure and red cell aggregability. Conclusions: A new, computer-based technique has been developed that provides measurements of rapid, time-dependent variations in the width of the cell-free layer in the microcirculation. [source] Lumbar ontogenetic growth and sexual dimorphism in modern humansAMERICAN JOURNAL OF HUMAN BIOLOGY, Issue 5 2010Elías Valverde To detect and differentiate between possible heterochronic processes in the ontogenetic growth pattern of the human lumbar region, in relationship with sexual dimorphism. We measured the growth trajectories of average length and width, length/width ratio, posterior projected surface area, and bone mineral density using dual energy X-ray absorptiometry, in a sample group of 1718 modern humans. These growth patterns were analyzed using the Gompertz model. In adult lumbar region, only surface area and width were significantly higher in men. Regarding the ontogenetic growth pattern leading to the dimorphic states, all values obtained for women were significantly higher than those obtained for men. Maximum initial growth rates occurred for surface area and density in women. Width scaled faster than length in both sexes. The lumbar region followed patterns similar to those of other skeletal elements when compared with a previous classification of growth patterns in the human skeleton; however, in this study, the growth rate was slower. With regard to the effect of dimorphism, sexual differences in growth rate accounted for only a small proportion of the variation in lumbar length, mineral density, and surface area. Nevertheless, these sexual differences played an important role in the increase of the length/width ratio, which was reflected in the ages at which sexual dimorphism developed. The sexual dimorphism found in the lumbar region of human adults is not caused by any heterochronic process. The lower values of bone mineral density in adult women could explain the origin of some pathologies related. Am. J. Hum. Biol. 22:596,603, 2010. © 2010 Wiley-Liss, Inc. [source] 4365: The role of transpupillary thermotherapy in combined treatment of retinoblastomaACTA OPHTHALMOLOGICA, Issue 2010SV SAAKYAN Purpose Retinoblastoma (RB) is one of the most serious ophthalmic pathology in childhood. Treatment options that provide eye preservation include chemotherapy, brachytherapy, external beam radiation, cryotherapy and laser treatment. The aim of our study is to evaluate efficiency of transpupillary thermotherapy (TTT) as a part of combined treatment of RB. Methods Our group consists of 30 RB patients (34 eyes). All patients received systemic chemotherapy (Carboplatin and Vincristine). Tumor thickness before TTT varied from 0.9 to 2.6 mm, tumor base diameter varied from 2 to 10 mm. Seven patients had monolateral RB, others had bilateral lesion. Five patients were treated with brachytherapy before TTT. TTT was performed using infrared diode laser Nidec DC 3300. Exposure time was 60 seconds. Width of laser beam was from 1000 to 2000 nm. TTT power setting varied from 600 to 900 mW. Eleven patients had TTT more then once. Follow-up period after TTT was up to 24 months. Results Control examination after TTT showed good response to the treatment in 27 eyes (79.4%). After TTT we saw hyperpigmented scar on the eye fundus at the place of previous tumor location, on OCT it looked like hyper-reflective stripe replacing all layers of a retina. Seven eyes (20.6%) were resistant to TTT, five of them were successfully treated by additional brachytherapy. Two eyes were enucleated because of uncontrolled tumor growth. Evaluation of metastatic disease in all patients revealed no signs of metastasis at the time of treatment or during follow-up. Conclusion TTT can be used in combined treatment of RB for small multifocal lesions. The method is rather simple and uncomplicated. Patients treated with TTT have better visual prognosis in comparison with brachytherapy. [source] UV Spectra and Excitation Delocalization in DNA: Influence of the Spectral WidthCHEMPHYSCHEM, Issue 7 2005Emanuela Emanuele Abstract The singlet excited states of the model DNA duplex (dA)10.(dT)10 are studied. Calculations are performed in the exciton theory framework. Molecular dynamics calculations provide the duplex geometry. The dipolar coupling is determined using atomic transition charges. The monomer transition energies are simulated by Gaussian functions resembling the absorption bands of nucleosides in aqueous solutions. Most of the excited states are found to be delocalized over at least two bases and result from the mixing of different monomer states. Their properties are only weakly affected by conformational changes of the double helix. On average, the highest oscillator strength is carried by the upper eigenstates. The duplex absorption spectra are shifted a few nanometers to higher energies with respect to the spectra of noninteracting monomers. The states with larger spatial extent are located close to the maximum of the absorption spectrum. [source] GENETIC ANALYSIS OF A CHROMOSOMAL HYBRID ZONE IN THE AUSTRALIAN MORABINE GRASSHOPPERS (VANDIEMENELLA, VIATICA SPECIES GROUP)EVOLUTION, Issue 1 2009Takeshi Kawakami Whether chromosomal rearrangements promote speciation by providing barriers to gene exchange between populations is one of the long-standing debates in evolutionary biology. This question can be addressed by studying patterns of gene flow and selection in hybrid zones between chromosomally diverse taxa. Here we present results of the first study of the genetic structure of a hybrid zone between chromosomal races of morabine grasshoppers Vandiemenella viatica, P24(XY) and viatica17, on Kangaroo Island, Australia. Chromosomal and 11 nuclear markers revealed a narrow hybrid zone with strong linkage disequilibrium and heterozygote deficits, most likely maintained by a balance between dispersal and selection. Widths and positions of clines for these markers are concordant and coincident, suggesting that selection is unlikely to be concentrated on a few chromosomes. In contrast, a mitochondrial marker showed a significantly wider cline with centre offset toward the P24(XY) side. We argue that the discordance between the mitochondrial and nuclear/chromosomal clines and overall asymmetry of the clines suggest a secondary origin of the contact zone and potential movement of the zone after contact. Genome-wide scans using many genetic markers and chromosomal mapping of these markers are needed to investigate whether chromosomal differences directly reduce gene flow after secondary contact. [source] The Temperature Response in the Ring Widths of Phyllocladus Aspleniifolius (Celery,top Pine) Along an Altitudinal Gradient in the Warra LTER Area, TasmaniaGEOGRAPHICAL RESEARCH, Issue 3 2002K.J. Allen The temperature response of four Phyllocladus aspleniifolius (Celery,top Pine) sites along an altitudinal gradient within a cool temperate broad leaf forest environment in the southwest of Tasmania, Australia was examined. Although strong evidence of a systematically changing response with elevation could not be found, there was evidence that minimum temperature in particular may be important in determining the altitudinal extent of the species. Climatic responses of the Warra LTER (Long Term Ecological Research) area sites were representative of other known sites in southwestern Tasmania. A link between event years in P. aspleniifolius and warm/dry conditions indicates that these event years may provide a guide to the historical frequency of fire weather in Tasmania's southwest. [source] Dependence of reaction kinetics on H2O activity as inferred from rates of intergranular diffusion of aluminiumJOURNAL OF METAMORPHIC GEOLOGY, Issue 7 2010W. D. CARLSON Abstract Quantitative constraints on the accelerative effects of H2O on the kinetics of metamorphic reactions arise from a comparison of rates of intergranular diffusion of Al in natural systems that are fluid-saturated, hydrous but fluid-undersaturated, and nearly anhydrous. Widths of symplectitic reaction coronas around partially resorbed garnet crystals in the contact aureole of the Makhavinekh Lake Pluton, northern Labrador, combined with time,temperature histories from conductive thermal models, yield intergranular diffusivities for Al from ,700,900 °C under nearly anhydrous conditions. Those rates, when extrapolated down temperature, are approximately three orders of magnitude slower than rates derived from re-analysis of garnet resorption coronas formed under hydrous but fluid-undersaturated conditions near 575 °C in rocks of the Llano Uplift of central Texas, which are in turn approximately four orders of magnitude slower than rates at comparable temperatures derived from numerical simulations of prograde garnet growth in fluid-saturated conditions in rocks from the Picuris Range of north-central New Mexico. Thus, even at constant temperature, rates of intergranular diffusion of Al , and corresponding length scales and timescales of metamorphic reaction and equilibration , may vary by as much as seven orders of magnitude across the range of H2O activities found in nature. [source] A comparison of manual and automated methods of measuring conjunctival vessel widths from photographic and digital imagesOPHTHALMIC AND PHYSIOLOGICAL OPTICS, Issue 2 2004Christopher G. Owen Abstract We investigated the application of a fully automated computer algorithm for identifying vessels of the conjunctiva from their scleral surround, and compared measures of vessel width with established methods. Vessel widths at 101 locations (ranging from 20 to 140 ,m), from 12 patients, were measured from film and digital images, using a variety of methods, and compared. Widths were measured manually, by semi-automated methods using grey level (densitometric) profiles taken from digital images, and by automated techniques set at different operating levels. Good intra-session repeatibility was obtained using the automated method with an operating sigma value of 3 pixels (16 ,m) (mean difference 0.5 ,m, 95% CI ,8.5 to 9.4 ,m) and manual calliper measurements from digitally created photographic slides (mean difference 0.4 ,m, ,9.3 to 10.1 ,m). For comparison with other measures of width, the latter was used as the gold standard. Widths measured from film were slightly larger than those measured directly from digital images, although this effect was small (5 ,m) for most vessels. Overall widths measured using the automated method, with a sigma value of 3 pixels, agreed best with the gold standard (inter-method repeatibility; mean difference 1.4 ,m, ,32.5 to 35.2 ,m) although the automated method overestimated small widths (<40 ,m) and underestimated larger vessel widths (>40 ,m). Automated detection of vessels of the conjunctiva from digital images avoids manual and operator involved measures which are time consuming, and which preclude large patient studies. The resulting data may help in monitoring the vascular response of the conjunctiva to surgical or pharmacological intervention, and in describing vascular changes in response to ocular or systemic disease. The application of this algorithm to the study of retinal vessels is yet to be realised. [source] Replication of sub-micron features using amorphous thermoplasticsPOLYMER ENGINEERING & SCIENCE, Issue 7 2002Kari mönkkönen A comprehensive experimental study was carried out to replicate sub-micron features using the injection molding technique. For the experiments, five different plastic materials were selected according to their flow properties. The materials were polycarbonate (PC), styrene-butadiene block copolymer (SBS), impact modified poly(methyl methacrylate), methyl methacrylate-acrylonitrile-butadiene-styrene polymer (MABS), and cyclic olefin copolymer (COC). Nanofeatures down to 200-nm line width and with aspect ratios (aspect ratio = depth/width) of 1:1 could be replicated. In all selected materials, the greatest differences between the materials emerged when the aspect ratio increased to 2:1. The most favorable results were obtained with the use of high flow polycarbonate as the molding material. The best replication results were achieved when melt and mold temperatures were higher than normal values. [source] Simulating Seepage into Mine Shafts and Tunnels with MODFLOWGROUND WATER, Issue 3 2010Jacob Zaidel In cases when an equivalent porous medium assumption is suitable for simulating groundwater flow in bedrock aquifers, estimation of seepage into underground mine workings (UMWs) can be achieved by specifying MODFLOW drain nodes at the contact between water bearing rock and dewatered mine openings. However, this approach results in significant numerical problems when applied to simulate seepage into an extensive network of UMWs, which often exist at the mine sites. Numerical simulations conducted for individual UMWs, such as a vertical shaft or a horizontal drift, showed that accurate prediction of seepage rates can be achieved by either applying grid spacing that is much finer than the diameter/width of the simulated openings (explicit modeling) or using coarser grid with cell sizes exceeding the characteristic width of shafts or drifts by a factor of 3. Theoretical insight into this phenomenon is presented, based on the so-called well-index theory. It is demonstrated that applying this theory allows to minimize numerical errors associated with MODFLOW simulation of seepage into UMWs on a relatively coarse Cartesian grid. Presented examples include simulated steady-state groundwater flow from homogeneous, heterogeneous, and/or anisotropic rock into a vertical shaft, a horizontal drift/cross-cut, a ramp, two parallel drifts, and a combined system of a vertical shaft connected to a horizontal drift. [source] Physical apertures as constraints on egg size and shape in the Common Musk Turtle, Sternotherus odoratusFUNCTIONAL ECOLOGY, Issue 1 2001P. J. Clark Summary 1,Egg size in turtles often increases with female size, contrary to expectations of optimality. Functional constraints on egg width imposed by the pelvic aperture or the gap between the carapace and plastron (the caudal gap) have been inferred for a few populations but appear inapplicable in others. 2,For Sternotherus odoratus (the Common Musk Turtle), the pelvic aperture was always wider than the width of the female's largest egg by at least 3·7 mm. The caudal gap was narrower than the widest egg for 25·7% of the females. 3,Egg width increased, and elongation (length/width) decreased, as female size and clutch size increased. 4,Females at three ecologically contrasting sites differed appreciably in size but produced eggs of the same mean shape and size, despite the strong within-site changes in both egg size and shape with female size. As the younger females at all sites were of similar age and produced eggs of similar size and shape (again, despite differences in body size), egg size and shape may be age-specific. 5,No optimal egg size prevailed but the scaled residuals of egg size with female mass were less variable than were those for clutch size. [source] Morphology and ultrastructure of the female accessory sex glands in various crickets (Orthoptera, Saltatoria, Gryllidae)MITTEILUNGEN AUS DEM MUSEUM FUER NATURKUNDE IN BERLIN-DEUTSCHE ENTOMOLOGISCHE ZEITSCHRIFT, Issue 2 2002Robert Sturm Abstract In the present study, the morphology and ultrastructure of the accessory sex glands in females of the three cricket species Teleogryllus commodus, Gryllus bimaculatus, and Gryllus assimilis were subject to a detailed comparison. Within the observed crickets, the pairy glands are uniformly located in the 6th and 7th abdominal segment, joining the genital chamber lateral to the terminal papilla. Each gland is composed of an apical region (R3), consisting of the end tubules which produce the main amount of secretion, a middle region (R2) storing and leading the secretion to the orifice, and a basal region (R1) defining the orifice and most basal part of the gland. Concerning the size, number of ramifications, and length/width ratio, the investigated organs are marked by great variations among the species, ranging from anisometric glands (length/width < or > 1) with low number of ramifications in Teleogryllus commodus and Gryllus assimilis to nearly isometric glands with very numerous (up to 30) ramifications in Gryllus bimaculatus. The morphology of the respective glands is uniformly expressed by an epithelium composed of a basal lamina, one layer of gland cells, and a luminal, duct-less cuticular intima forming specific spines and hair-like processes. The ultrastructure of single gland cells is marked by a basal region with a large elliptic nucleus and intracellular cisternae formed by deep invaginations of the basal cell membrane. The apical part contains numerous lipid- and protein-forming compartments, mitochondria of cristae type, vesicles, and lipid drops. The apical cell surface is enlarged by forming a dense layer of microvilli. The lipophilic secretion produced by the glands is thought to be used as a lubricant in the ovipositor during egg-laying. [source] Anatomic study of the prechiasmatic sulcus and its surgical implicationsCLINICAL ANATOMY, Issue 6 2010Bharat Guthikonda Abstract To address a lack of anatomical descriptions in the literature regarding the prechiasmatic sulcus, we conducted an anatomical study of this sulcal region and discuss its clinical relevance to cranial base surgery. Our systematic morphometric analysis includes the variable types of chiasmatic sulcus and a classification schema that has surgical implications. We examined the sulcal region in 100 dry skulls; bony relationships measured included the interoptic distance, sulcal length/width, planum sphenoidale length, and sulcal angle. The varied anatomy of the prechiasmatic sulcii was classified as four types in combinations of wide to narrow, steep to flat. Its anterior border is the limbus sphenoidale at the posterior aspect of the planum sphenoidale. The sulcus extends posteriorly to the tuberculum sellae and laterally to the posteromedial aspect of each optic strut. Averages included an interoptic distance (19.3 ± 2.4 mm), sulcal length (7.45 ± 1.27 mm), planum sphenoidale length (19 ± 2.35 mm), and sulcal angle (31 ± 14.2 degrees). Eighteen percent of skulls had a chiasmatic ridge, a bony projection over the chiasmatic sulcus. The four types of prechiasmatic sulcus in our classification hold potential surgical relevance. Near the chiasmatic ridge, meningiomas may be hidden from the surgeon's view during a subfrontal or pterional approach. Preoperative evaluation by thin-cut CT scans of this region can help detect this ridge. Clin. Anat. 23:622,628, 2010. © 2010 Wiley-Liss, Inc. [source] Stable stylized wireframe renderingCOMPUTER ANIMATION AND VIRTUAL WORLDS (PREV: JNL OF VISUALISATION & COMPUTER ANIMATION), Issue 3-4 2010Chen Tang Abstract Stylized wireframe rendering of 3D model is widely used in animation software in order to depict the configuration of deformable model in comprehensible ways. However, since some inherent flaws in traditional depth test based rendering technology, shape of lines can not been preserved as continuous movement or deformation of models. There often exists severe aliasing like flickering artifact when objects rendered in line form animate, especially rendered with thick or dashed line. To cover this artifact, unlike traditional approach, we propose a novel fast line drawing method with high visual fidelity for wireframe depiction which only depends on intrinsic topology of primitives without any preprocessing step or extra adjacent information pre-stored. In contrast to previous widely-used solutions, our method is advantageous in highly accurate visibility, clear and stable line appearance without flickering even for thick and dashed lines with uniform width and steady configuration as model moves or animates, so that it is strongly suitable for animation system. In addition, our approach can be easily implemented and controlled without any additional preestimate parameters supplied by users. Copyright © 2010 John Wiley & Sons, Ltd. [source] An automated pottery archival and reconstruction systemCOMPUTER ANIMATION AND VIRTUAL WORLDS (PREV: JNL OF VISUALISATION & COMPUTER ANIMATION), Issue 3 2003Martin Kampel Abstract Motivated by the current requirements of archaeologists, we are developing an automated archival system for archaeological classification and reconstruction of ceramics. Our system uses the profile of an archaeological fragment, which is the cross-section of the fragment in the direction of the rotational axis of symmetry, to classify and reconstruct it virtually. Ceramic fragments are recorded automatically by a 3D measurement system based on structured (coded) light. The input data for the estimation of the profile is a set of points produced by the acquisition system. By registering the front and the back views of the fragment the profile is computed and measurements like diameter, area percentage of the complete vessel, height and width are derived automatically. We demonstrate the method and give results on synthetic and real data. Copyright © 2003 John Wiley & Sons, Ltd. [source] | ||||||||||||||||||||||||||||||||||||||||||||||