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Useful Indicator (useful + indicator)
Selected AbstractsAre Ants Useful Indicators of Restoration Success in Temperate Grasslands?RESTORATION ECOLOGY, Issue 3 2010Kate C. Fagan Assessments of restoration are usually made through vegetation community surveys, leaving much of the ecosystem underexamined. Invertebrates, and ants in particular, are good candidates for restoration evaluation because they are sensitive to environmental change and are particularly important in ecosystem functioning. The considerable resources currently employed in restoring calcareous grassland on ex-arable land mean that it is important to gather as much information as possible on how ecosystems change through restoration. We compared ant communities from 40 ex-arable sites where some form of restoration work had been implemented between 2 and 60 years previously, with 40 paired reference sites of good quality calcareous grassland with no history of improvement or cultivation. A total of 11 ant species were found, but only two of these were found to be significantly different in abundance between restoration and reference sites: Myrmica sabuleti was more likely to be present in reference sites, whereas Lasius niger was more likely to be found in restoration sites. Myrmica sabuleti abundance was significantly positively correlated with age of restoration sites. The potential number of ant species found in temperate grasslands is small, limiting the information their assemblages can provide about ecosystem change. However, M. sabuleti is a good indicator species for calcareous grassland restoration success and, alongside information from the plant community, could increase the confidence with which restoration success is judged. We found the survey to be quick and simple to carry out and recommend its use. [source] Best available techniques (BAT) in the Finnish pulp and paper industry , a critical reviewENVIRONMENTAL POLICY AND GOVERNANCE, Issue 3 2005Kimmo Silvo Abstract In this multiple-case study the BAT-associated techniques and relative emission levels presented in the EU's best available techniques (BAT) reference document for the pulp and paper industry (PP-BREF) are compared with the techniques applied and the relative emission levels achieved in the Finnish pulp and paper industry. Information on the emissions of 24 Finnish pulp and paper plants was compiled from the national databases maintained by the Finnish Environment Institute. Moreover, a supportive study was conducted on the use of the PP-BREF in the environmental permitting process. The techniques applied in the studied plants represented the BAT as defined in the PP-BREF to a high degree, but the emission levels showed a larger variation. Possible reasons for this variation were discussed. A BAT emission index (BEI) was designed to trace the degree to which the BAT-associated emission levels were achieved as a whole. The BEI appeared to be a useful indicator for assessing the BAT-related environmental performance of the plants. An important area for improvement, identified from the point of view of the applicability of the PP-BREF in the permit process, was the information on waste management issues. Moreover, a consistent cross-media assessment in the PP-BREF was called for. Copyright © 2005 John Wiley & Sons, Ltd and ERP Environment. [source] Adsorption of hydrophobic organic compounds onto a hydrophobic carbonaceous geosorbent in the presence of surfactants,ENVIRONMENTAL TOXICOLOGY & CHEMISTRY, Issue 6 2008Peng Wang Abstract The adsorption of hydrophobic organic compounds (HOCs; atrazine and diuron) onto lampblack was studied in the presence of nonionic, cationic, and anionic surfactants (Triton® X-100), benzalkonium chloride [BC], and linear alkylbenzene sulfonate [LAS]) to determine the effect of the surfactant on HOC adsorption onto a hydrophobic carbonaceous geosorbent. Linear alkylbenzene sulfonate showed an adsorption capacity higher than that of BC but similar to that of Triton X-100, implying the charge property of a surfactant is not a useful indicator for predicting the surfactant's adsorption onto a hydrophobic medium. The results also indicated that the octanol-water partition coefficient (Kow) of a surfactant is not a good predictor of that surfactant's sorption onto a hydrophobic medium. Under subsaturation adsorption conditions (i.e., before sorption saturation is reached), surfactant adsorption reduced HOC adsorption to a significant extent, with the reduction in HOC adsorption increasing monotonically with the amount of surfactant adsorbed. Among the three surfactants, Triton X-100 was the most effective in reducing HOC adsorption, whereas BC and LAS showed similar effectiveness in this regard. Under the same amount of the surfactant sorbed, the reduction in atrazine adsorption was consistently greater than that for diuron because of atrazine's lower hydrophobicity. No significant difference was observed in the amount of the HOC adsorbed under different adsorption sequences. Our results showed that the presence of surfactant can significantly decrease HOC adsorption onto hydrophobic environmental media and, thus, is important in predicting HOC fate and transport in the environment. [source] Harbor seals (Phoca vitulina) in British Columbia, Canada, and Washington State, USA, reveal a combination of local and global polychlorinated biphenyl, dioxin, and furan signalsENVIRONMENTAL TOXICOLOGY & CHEMISTRY, Issue 1 2004Peter S. Ross Abstract The harbor seal (Phoca vitulina) can serve as a useful indicator of food web contamination by persistent organic pollutants (POPs) because of its high trophic level, wide distribution in temperate coastal waters of the Northern Hemisphere, and relative ease of capture. In 1996 through 1997, we live-captured 60 harbor seal pups from three regions, spanning remote (Queen Charlotte Strait, BC, Canada), moderately industrialized (Strait of Georgia, BC, Canada), and heavily industrialized (Puget Sound, WA, USA) marine basins straddling the Canada-United States border. Biopsy samples of blubber were taken and analyzed for congener-specific polychlorinated biphenyls (PCBs), polychlorinated dibenzo- p -dioxins (PCDDs), and polychlorinated dibenzofurans (PCDFs) by using high-resolution gas chromatography-high-resolution mass spectrometry. Harbor seals in Puget Sound were heavily contaminated with PCBs, whereas seals from the Strait of Georgia had relatively high concentrations of PCDDs and PCDFs. Pattern evaluation and principal components analysis suggested that proximity to sources influenced the mixture to which seals were exposed, with those inhabiting more remote areas being exposed to lighter PCB congeners (those with lower Henry's law constant and KOW) that disperse more readily through atmospheric and other processes. Total toxic equivalents to 2,3,7,8-tetrachlorodibenzo- p -dioxin for the PCBs, PCDDs, and PCDFs suggest that Puget Sound seals are at greatest risk for adverse health effects, and that PCBs represent the class of dioxinlike contaminants of greatest concern at all sites. [source] An investigation of the relationship between race performance and superficial digital flexor tendonitis in the Thoroughbred racehorseEQUINE VETERINARY JOURNAL, Issue 4 2010B. O'MEARA Summary Reasons for performing study: There is limited information regarding the number of races and the period for evaluation of outcome which is critical for assessment of SDF tendonitis treatments. Objective: To evaluate the re-injury rate and racing performance of Thoroughbred racehorses that sustain SDF tendonitis in relation to matched controls in terms of number of races post treatment and maximum racing performance ratings before and after injury. Study design: Clinical records and racing histories of 401 racehorses with a first occurrence of SDF tendonitis diagnosed by ultrasonography. Controls were of the same age, sex and were horses training in the same establishment at the time of injury as the case horses and where the trainer reported that the horse had not had a previous SDF tendon injury or treatment. Results: Eighty percent of both case and control horses returned to racing after the date of injury, and the re-injury proportion within 3 years of treatment was 53%. The difference in Racing Post Rating(max) (RPR(max)) and the Racing Post Rating in the race immediately before the treatment date was significantly smaller in case horses (mean = 9.6 lbs; range = 0,75) compared to control horses (mean = 17.0 lbs; range = 0,79). No significant decrease in RPR(max) was noted post injury. No difference between case and control horses was found for return to racing and racing 3 times, but control horses were significantly more likely to compete 5 races post treatment date than case horses. Conclusion and clinical relevance: Injury was associated with an individual's pre-injury maximum performance level and return to racing and completion of 3 races are not useful indicator of the outcome of horses with SDF tendonitis. The assessment of the outcome of horses with an SDF injury in a population of racehorses using the number of races post injury requires a minimum of 5 races post injury to be a useful indicator. Further, a re-injury proportion in a population of horses in training for 3 years post treatment. [source] Serum transferrin receptor, ferritin, and reticulocyte maturity indices during the first year of life in ,large' preterm infantsEUROPEAN JOURNAL OF HAEMATOLOGY, Issue 5 2007Vassiliki Schiza Abstract Background:, Preterm infants are at risk of developing iron deficiency; among the iron status and hemopoiesis indices the serum transferrin receptor (sTfr) has been shown to be a useful indicator in assessing iron status, while immature reticulocyte production is regarded as an estimator of erythropoiesis. Objective:, To investigate age-related changes in iron status infants born ,moderately' preterm, with a gestational age (GA) of 32,36 wk, and identify associations between sTfr and other hematological and biochemical iron indices. Design:, Hospital-based prospective, longitudinal study in preterm infants. Methods:, Iron and erythropoiesis parameters were evaluated in 181 formula-fed preterm infants at 2 and 6 wk and 3, 6, 9, and 12 months chronological age. Hemoglobulin (Hb), hematocrit (Hct), mean corpuscular volume (MCV), reticulocytes, serum iron (sFe), serum ferritin (sFer), sTfr, and reticulocyte subpopulations were measured. Results:, A total of 756 measurements were performed. After an initial decline, Hb rose from month 3 to 12 of life. SFe and sFer and immature reticulocyte count decreased from the second week to the third month and remained stable thereafter. STfr was lower up to 6 wk and stable from month 3 to 12. Iron deficiency anemia (IDA) was found in 5.5% of infants. In 76 measurements sFer was <12 ,g/L, implying storage iron deficiency (SID). A negative correlation was observed between sTfr and other indices of iron status such as Hb, Hct, MCV, sFe, and sFer. Infants with sFer <12 ,g/L had lower sTfr than those with sFer >12 ,g/L. Reticulocyte production was positively associated with STfr, but this association was dependent on the chronological age of the infant. Conclusion:, Iron depletion is common in formula-fed preterm (32,36 wk GA) infants between month 3 and 12 of life. STfr appears to be an indicator of iron status in preterm infants during the first year of life. [source] Screening for target Rabs of TBC (Tre-2/Bub2/Cdc16) domain-containing proteins based on their Rab-binding activityGENES TO CELLS, Issue 9 2006Takashi Itoh It has recently been proposed that the TBC (Tre2/Bub2/Cdc16) domain functions as a GAP (GTPase-activating protein) domain for small GTPase Rab. Because of the large number of Rab proteins in mammals, however, most TBC domains have never been investigated for Rab-GAP activity. In this study we established panels of the GTP-fixed form of 60 different Rabs constructed in pGAD-C1, a yeast two-hybrid bait vector. We also constructed a yeast two-hybrid prey vector (pGBDU-C1) that harbors the cDNA of 40 distinct TBC proteins. Systematic investigation of 2400 combinations of 60 GTP-fixed Rabs and 40 TBC proteins by yeast two-hybrid screening revealed that seven TBC proteins specifically and differentially interact with specific Rabs (e.g. OATL1 interacts with Rab2A; FLJ12085 with Rab5A/B/C; and Evi5-like with Rab10). Measurement of in vitro Rab-GAP activity revealed that OATL1 and Evi5-like actually possess significant Rab2A- and Rab10-GAP activity, respectively, but that FLJ12085 do not display Rab5A-GAP activity at all. These results indicate that specific interaction between TBC protein and Rab would be a useful indicator for screening for the target Rabs of some TBC/Rab-GAP domains, but that there is little correlation between the Rab-binding activity and Rab-GAP activity of other TBC proteins. [source] Accounting for residual effects of previously applied nitrogen fertilizer on intensively managed grasslandsGRASS & FORAGE SCIENCE, Issue 1 2010T. V. Vellinga Abstract Only 0·20,0·70 of the fertilizer-nitrogen (N) applied to grassland is taken up in herbage in the harvest directly following application. Residual effects at subsequent harvests can be large but are poorly quantified, and rarely taken into account in current management practices. An increased understanding of N-use efficiency per harvest can improve operational management. This study systematically assessed the residual effects of previously applied N fertilizer on N uptake, dry matter (DM) yield and soil mineral-N (SMN) during the whole of the growing season. It is based on field experiments conducted on peat and mineral soils in 1991,1994. Statistical models were derived for SMN, N uptake and DM yield as a function of previously and freshly applied N fertilizer. There were clear residual effects of previously applied N in later cuts. They were relatively greater at higher levels of N fertilizer. On peat soils, 0·15,0·25 of the N applied was recovered as SMN. On mineral soils the proportion was maximally 0·08. There was a clear relationship between SMN and N uptake in the subsequent cut on mineral soils but not on peat soils. The value of SMN as a tool to adjust fertilizer-N application rates was hence found to be limited. There were clear relationships between the amount of previously applied N and the N uptake in subsequent cuts, on both soil types and over the whole of the growing season. It was concluded that the total amount of previously applied N is a useful indicator for adjusting N-fertilizer application rates. [source] Effect of H2 and Redox Condition on Biotic and Abiotic MTBE TransformationGROUND WATER MONITORING & REMEDIATION, Issue 4 2006P.M. Bradley Laboratory studies conducted with surface water sediment from a methyl tert -butyl ether (MTBE)-contaminated site in South Carolina demonstrated that, under methanogenic conditions, [U- 14C] MTBE was transformed to 14C tert -butyl alcohol (TBA) with no measurable production of 14CO2. Production of TBA was not attributed to the activity of methanogenic microorganisms, however, because comparable transformation of [U- 14C] MTBE to 14C-TBA also was observed in heat-sterilized controls with dissolved H2 concentrations > 5 nM. The results suggest that the transformation of MTBE to TBA may be an abiotic process that is driven by biologically produced H2 under in situ conditions. In contrast, mineralization of [U- 14C] MTBE to 14CO2 was completely inhibited by heat sterilization and only observed in treatments characterized by dissolved H2 concentrations < 2 nM. These results suggest that the pathway of MTBE transformation is influenced by in situ H2 concentrations and that in situ H2 concentrations may be an useful indicator of MTBE transformation pathways in ground water systems. [source] Carbon isotope fractionation of dissolved inorganic carbon (DIC) due to outgassing of carbon dioxide from a headwater streamHYDROLOGICAL PROCESSES, Issue 14 2008Daniel H. Doctor Abstract The stable isotopic composition of dissolved inorganic carbon (,13C-DIC) was investigated as a potential tracer of streamflow generation processes at the Sleepers River Research Watershed, Vermont, USA. Downstream sampling showed ,13C-DIC increased between 3,5, from the stream source to the outlet weir approximately 0·5 km downstream, concomitant with increasing pH and decreasing PCO2. An increase in ,13C-DIC of 2·4 ± 0·1, per log unit decrease of excess PCO2 (stream PCO2 normalized to atmospheric PCO2) was observed from downstream transect data collected during snowmelt. Isotopic fractionation of DIC due to CO2 outgassing rather than exchange with atmospheric CO2 may be the primary cause of increased ,13C-DIC values downstream when PCO2 of surface freshwater exceeds twice the atmospheric CO2 concentration. Although CO2 outgassing caused a general increase in stream ,13C-DIC values, points of localized groundwater seepage into the stream were identified by decreases in ,13C-DIC and increases in DIC concentration of the stream water superimposed upon the general downstream trend. In addition, comparison between snowmelt, early spring and summer seasons showed that DIC is flushed from shallow groundwater flowpaths during snowmelt and is replaced by a greater proportion of DIC derived from soil CO2 during the early spring growing season. Thus, in spite of effects from CO2 outgassing, ,13C of DIC can be a useful indicator of groundwater additions to headwater streams and a tracer of carbon dynamics in catchments. Copyright © 2007 John Wiley & Sons, Ltd. [source] Population trends of widespread woodland birds in EuropeIBIS, Issue 2007RICHARD D. GREGORY We explore population trends of widespread and common woodland birds using data from an extensive European network of ornithologists for the period 1980,2003. We show considerable differences exist in the European trends of species according to the broad habitat they occupy and the degree to which they specialize in habitat use. On average, common forest birds are in shallow decline at a European scale; common forest birds declined by 13%, and common forest specialists by 18%, from 1980 to 2003. In comparison, populations of common specialists of farmland have declined moderately, falling on average by 28% from 1980 to 2003. These patterns contrast with that shown by generalist species whose populations have been roughly stable over the same period, their overall index increasing by 3%. There was some evidence of regional variation in the population trends of these common forest species. The most obvious pattern was the greater stability of population trends in Eastern Europe compared with other regions considered. Among common forest birds, long-distance migrants and residents have on average declined most strongly, whereas short-distance migrants have been largely stable, or have increased. There was some evidence to suggest that ground- or low-nesting species have declined more strongly on average, as have forest birds with invertebrate diets. Formal analysis of the species trends confirmed the influence of habitat use, habitat specialization and nest-site; the effects of region and migration strategy were less clear-cut. There was also evidence to show that year-to-year variation in individual species trends at a European scale was influenced by cold winter weather in a small number of species. We recommend that the species trend information provided by the new pan-European scheme should be used alongside existing mechanisms to review the conservation status of European birds. The analysis also allows us to reappraise the role of common forest bird populations as a potential barometer of wider forest health. The new indicator appears to be a useful indicator of the state of widespread European forest birds and might prove to be a useful surrogate for trends in forest biodiversity and forest health, but more work is likely to be needed to understand the interaction between bird populations and their drivers in forest. [source] Local and systemic interleukin-18 and interleukin-18-binding protein in children with inflammatory bowel diseaseINFLAMMATORY BOWEL DISEASES, Issue 1 2008Steven T. Leach Abstract Background: Interleukin-18 (IL-18) is increased in the inflamed mucosa of patients with Crohn's disease (CD). The balance between this pleiotropic proinflammatory cytokine and its natural inhibitor, IL-18-binding protein (IL-18BP), may contribute to the pathogenesis of inflammatory bowel disease (IBD). Methods: Serum and mucosal biopsies were collected from children with IBD, from children with celiac disease, and from controls. Biopsies were maintained in culture for 24 hours, and supernatant was collected. Serum and supernatant IL-18 and IL-18BPa concentrations were measured by immunoassay. Disease activity score (PCDAI) and standard serum inflammatory markers (albumin, platelets, ESR, and CRP) were recorded. Results: Serum IL-18 was greater in children with CD (537 pg/mL) than in controls (335 pg/mL; P < 0.05) but not in children with ulcerative colitis (UC) or IBD type unclassified (IBDU). Mucosal IL-18 was greater in children with CD and UC/IBDU than in controls (P < 0.01). Serum IL-18BPa was increased in children with CD compared with that in controls (3.9 versus 2.6 ng/mL; P < 0.05), but was not elevated in children with UC/IBDU. Furthermore, calculated free-serum IL-18 was elevated in CD, but not UC/IBDU, compared with that in controls (P = 0.001). Total and free-serum IL-18 were elevated in severe CD relative to in mild/moderate disease. Conclusions: IL-18, produced in the colons of children with IBD, may contribute to local inflammatory changes. Systemic IL-18 level may be a useful indicator of gut inflammation. Furthermore, free IL-18 is greatly elevated in children with CD, suggesting that compensatory increases in IL-18BPa are insufficient. Further exploration of the role of this cytokine in the pathogenesis of IBD is now required. (Inflamm Bowel Dis 2007) [source] The nature of body image disturbance in patients with binge eating disorderINTERNATIONAL JOURNAL OF EATING DISORDERS, Issue 3 2003Robin M. Masheb Abstract Objective This study examined the distinction between body dissatisfaction and self-evaluation unduly influenced by body shape and weight, and their longitudinal relationships to depressive symptomatology and self-esteem in patients with binge eating disorder (BED). Method Ninety-seven patients with BED completed measures tapping these constructs at baseline and again 4 weeks later. Results Change in body dissatisfaction was significantly correlated with both change in depressive symptomatology and change in self-esteem over time, whereas change in self-evaluation was significantly correlated only with change in self-esteem. In addition, change in shape concern, but not change in weight concern, was significantly correlated with change in self-esteem only. Discussion These findings suggest that self-evaluation unduly influenced by body shape is a more useful indicator for BED than body dissatisfaction or self-evaluation unduly influenced by weight. © 2003 by Wiley Periodicals, Inc. Int J Eat Disord 33: 333,341, 2003. [source] MRI white matter hyperintensities, 1H-MR spectroscopy and cognitive function in geriatric depression: a comparison of early- and late-onset casesINTERNATIONAL JOURNAL OF GERIATRIC PSYCHIATRY, Issue 12 2001Tetsuhito Murata Abstract Background and Objectives Geriatric depression is often thought to differ from that at other times of adulthood. Recently, several studies have shown that the incidence of white matter hyperintense lessions identified by brain MRI is higher in patients with geriatric depression than in healthy elderly subjects, but a consensus has not yet been reached on the relationship between the severity of white matter lesions and either cognitive impairment or depressive symptoms. Method Forty-seven patients aged 50 to 75 years with major depression were divided into two groups based on age at onset of depression: early-onset (<,50 years) group (20 patients; mean age, 62.7,±,6.7) and late-onset (,50 years) group (27 patients; mean age, 65.6,±,5.4). The severity of hyperintense white matter lesions on MRI was classified by region, then a proton magnetic resonance spectroscopy (1H-MRS) focusing on the white matter of the frontal lobes, multidimensional neuropsychological tests and evaluation of depressive symptoms were conducted. Results The severity of the deep white matter lesions, the deterioration of cognitive function related to subcortical/frontal brain system and clinician-rated depressive symptoms were all more pronounced in the late-onset group compared with those in the early-onset group. It was further observed that the more severe the deep white matter lesions, the lower the levels of N-acetylaspartate/creatine. With the age of onset as the covariate, the patients with moderate deep white matter lesions had more pronounced cognitive impairment and clinician-rated depressive symptoms than those with none and/or mild lesions. Conclusion These results suggest that subcortical/frontal type cognitive impairment and the persistence of depressive symptoms in geriatric depression is related to moderate deep white matter lesions more often complicated in the late-onset group. The 1H-MRS findings were suggested to be a useful indicator of neuronal/axonal loss in the white matter of the frontal lobes which precedes cognitive impairment. Copyright © 2001 John Wiley & Sons, Ltd. [source] Genetic variances due to imprinted genes in cattleJOURNAL OF ANIMAL BREEDING AND GENETICS, Issue 3 2002TH. ENGELLANDT The effect of paternally expressed, i.e. maternally imprinted, genes on slaughter records from 2744 German Gelbvieh finishing bulls were estimated. Significant effects of paternal gametes were found for two fatness traits and an estimate of meat content. Paternally expressed genes explained 14 and 16% of the phenotypic variances for pelvic fat and kidney fat, respectively. Ignoring paternal gametic effects resulted in inflated estimates of the additive genetic variances. The heritabilities of pelvic and kidney fat dropped from 0.31 to 0.16 and from 0.59 to 0.28, respectively, when paternal gametes were fitted. A 15% influence of paternally expressed genes and a reduction in heritability of 20% were also found for estimated meat content. Simulation studies demonstrated that the uncorrelated random effect of the sire is a useful indicator for the presence of paternal gametic effects in variance component estimations. The presented results correspond well with findings in swine, where a paternally expressed QTL at the Igf2 gene influences similar trait complexes. A viable speculation could therefore be that an imprinted bovine Igf2 gene caused the effects described here. Genetische Variation auf Grund von paternal exprimierten Genen beim Rind In der vorliegenden Studie wurde der Effekt von paternal exprimierten Genen auf Merkmale der Schlachtleistung und des Schlachtkörperwertes von 2744 Mastbullen der Rasse Gelbvieh geschätzt. Signifikante Effekte von paternal exprimierten Genen wurden für zwei Fettabschnitte des Schlachtkörpers und für den geschätzten Fleischanteil gefunden, sie erklärten 14% und 16% der phänotypischen Varianzen des Becken- und Nierenfettes. Das Nichtbeachten dieser Effekte im linearen Schätzmodell führte zu einer Überschätzung der additiv genetischen Varianzen in den jeweiligen Merkmalen. Wurden die Effekte der paternalen Gameten im Schätzmodell berücksichtigt, fielen die geschätzten Heritabilitäten des Becken- und Nierenfettes von h2=0,31 auf h2=0,16 bzw. von h2=0,59 auf h2=0,28. Der Einfluß der paternalen Gameten auf die phänotypische Varianz des geschätzten Fleischanteils des Schlachkörpers wurde auf 15% geschätzt. Bei Berücksichtigung dieser Effekte im linearen Schätzmodell fiel die Heritabilität des Merkmals Fleischanteil um 20%. In Simulationsstudien konnte gezeigt werden, daß der unkorrelierte, zufällige Effekt des Vaters ein nützlicher Indikator für eventuell vorhandene paternal gametische Effekte bei der Schätzung von Varianzkomponenten sein kann. Die gefundenen Ergebnisse weisen Parallelen zu Untersuchungen beim Schwein auf, wo ein paternal exprimierter QTL am Igf2 Locus ähnliche Merkmalskomplexe beeinflußt. Eine mögliche Spekulation könnte daher sein, daß die hier beschriebenen Effekte beim Rind durch einen Igf2 Locus verursacht werden, der dem Phänomen des Imprinting unterliegt. [source] Fluctuating asymmetry as a bio-indicator in isolated populations of the Taita thrush: a Bayesian perspectiveJOURNAL OF BIOGEOGRAPHY, Issue 5-6 2002Luc Lens Aim We examined whether developmental instability can be used as a bio-monitoring tool in the endangered Taita thrush (Turdus helleri L.) through the measurement of individual levels of fluctuating asymmetry in tarsus length. Because estimates of the association between developmental instability, stress and fitness derived from traditional regression are biased, we compared parameter estimates obtained from likelihood based analysis with those obtained from a Bayesian latent variable model. Location Taita thrushes were captured and measured in three isolated cloud forest fragments located in the Taita Hills of south-east Kenya. Methods We applied mixed-effects regression with Restricted Maximum Likelihood parameter estimation (performed with SAS version 8.0) and Bayesian latent variable modelling (performed with WINBUGS version 1.3 and CODA version 0.4) to estimate unbiased levels of developmental instability and to model relationships between developmental instability and body condition in 312 Taita thrushes. Results Likelihood and Bayesian analyses yielded highly comparable results. Individual levels of developmental instability were strongly inversely related to body condition in the subpopulation with the lowest average condition. In contrast, both variables were unrelated in two other subpopulations with higher average condition. Such heterogeneity in association was in the direction expected by developmental theory, given that higher condition suggests more benign ambient conditions. The estimated levels of body condition in the three subpopulations did not support their presumed ranking in relation to environmental stress. Developmental instability and body condition are therefore believed to reflect different aspects of individual fitness. Main conclusions Variation in developmental homeostasis, either modelled as observable variable (fluctuating asymmetry) or latent variable (developmental instability), appears a useful indicator of stress effects in the Taita thrush. Because relationships between environmental stress and developmental instability may depend on the extent to which stress-mediated changes in other components of phenotypic variation are correlated, the study of trait asymmetry should preferably be combined with that of other measures of trait variability, such as trait size or organismal condition. [source] Fluctuating asymmetry in a secondary sexual trait: no associations with individual fitness, environmental stress or inbreeding, and no heritabilityJOURNAL OF EVOLUTIONARY BIOLOGY, Issue 1 2003L. E. B. Kruuk Abstract It has been suggested that fluctuating asymmetry (FA) in secondary sexual traits may be a useful indicator of either individual quality or environmental stress. We tested this concept using a series of analyses of FA in male antler size in a wild red deer (Cervus elaphus) population, using four measures of size repeated across successive years on the same individuals. We found no consistent evidence of correlations between traits in levels of FA, nor of any associations between known environmental or developmental conditions. None of the four measures of FA showed a significant heritability (average h2=0.041), nor was there any evidence of inbreeding depression. For three of the four traits, fluctuating asymmetry did not predict either annual or lifetime breeding success. However there were significant associations between breeding success and FA in antler length. Given the series of null results in our other tests, it seems likely that this was a direct mechanistic effect rather than because measures of FA were indicative of individual quality or condition. [source] Effects of 11-ketotestosterone on genital papilla morphology in the sex changing fish Lythrypnus dalliJOURNAL OF FISH BIOLOGY, Issue 2 2000S. L. Carisle Five days after implantation with 11-ketotestosterone (KT) female Lythrypnus dalli exhibited elevated urinary KT levels and male-like genital papilla morphology. Papilla length increased, width decreased, and length : width ratio increased. Control fish exhibited increases in papilla length, and length : width ratio on day 3, but not on day 5. Changes in the total area of the papilla were not statistically significant. It is suggested that KT mediates genital papilla morphology rapidly and thus may be a useful indicator of circulating KT in L. dalli. [source] The development of PET radioligands for imaging the translocator protein (18,kDa): What have we learned?JOURNAL OF LABELLED COMPOUNDS AND RADIOPHARMACEUTICALS, Issue 7 2010Christopher Luus Abstract The translocator protein (TSPO; 18,kDa), formerly known as the peripheral benzodiazepine receptor (PBR), is minimally expressed in the healthy brain. On the other hand, increased levels of TSPO have been noted in brain disorders for which an immune response is elicited. This increase in TSPO expression has been reported to coincide with the process of microglial activation making the measurement of TSPO density a useful indicator of active brain disease. To this end several new classes of TSPO positron emission tomography radioligands have been developed and evaluated. However, the incomplete pharmacological characterization of the TSPO and its ligands as well as differences in pathophysiology, pharmacology and molecular nature across species and tissue types means that caution must be exercised when comparing data obtained with various TSPO radioligands. A re-evaluation of our interpretation of imaging data, which better correlates with our current understanding of TSPO pharmacology in disease, requires consideration. Copyright © 2010 John Wiley & Sons, Ltd. [source] Variations in the transient prograde geothermal gradient from chloritoid-staurolite equilibria: a case study from the Barrovian and Buchan-type domains in the Bohemian MassifJOURNAL OF METAMORPHIC GEOLOGY, Issue 1 2007M. KO Abstract Thermodynamic modelling of metamorphic rocks increases the possibilities of deciphering prograde paths that provide important insights into early orogenic evolution. It is shown that the chloritoid,staurolite transition is not only an indicator of temperature on prograde P,T paths, but also a useful indicator of pressure. The approach is applied to the Moravo-Silesian eastern external belt of the Bohemian Massif, where metamorphic zones range from biotite to staurolite-sillimanite. In the staurolite zone, inclusions of chloritoid occur in garnet cores, while staurolite is included at garnet rims and is widespread in the matrix. Chloritoid XFe = 0.91 indicates transition to staurolite at 5 kbar and 550 °C and consequently, an early transient prograde geothermal gradient of 29 °C km,1. The overall elevated thermal evolution is then reflected in the prograde transition of staurolite to sillimanite and in the achievement of peak temperature of 660 °C at a relatively low pressure of 6.5 kbar. To the south and to the west of the studied area, high-grade metamorphic zones record a prograde path evolution from staurolite to kyanite and development of sillimanite on decompression. Transition of chloritoid to staurolite was reported in two places, with chloritoid XFe = 0.75,0.80, occurring at 8,10 kbar and 560,580 °C, and indicating a transient prograde geothermal gradient of 16,18 °C km,1. These data show variable barric evolutions along strike and across the Moravo-Silesian domain. Elevated prograde geothermal gradient coincides with areas of Devonian sedimentation and volcanism, and syn- to late Carboniferous intrusions. Therefore, we interpret it as a result of heat inherited from Devonian rifting, further fuelled by syntectonic Carboniferous intrusions. [source] Relationship between ease of swallowing and deglutition-related muscle activity in various posturesJOURNAL OF ORAL REHABILITATION, Issue 8 2010T. SAKUMA Summary, The purpose of this study was to investigate the relationship between the ease of swallowing and the deglutition-related muscle activity in various body and head postures by surface electromyography (EMG). Bipolar surface electrodes were placed on the right suprahyoid and infrahyoid muscles of nine healthy adults (19,28 years) while swallowing jelly. Ten postures per subject were examined: five body angulations (0° [supine], 30°, 60°, 90° [upright] and 120° from the horizontal) and two head positions (chin-up and chin-down). The duration and amplitude of suprahyoid and infrahyoid muscle activity were measured by an electromyograph, and the ease of swallowing was subjectively determined by using a rating scale (0 = difficult to swallow, 10 = easy to swallow). The group-average duration and amplitude of muscle activity and the group-average rating scales mostly showed insignificant changes with the body angulations independent of the head positions. Interestingly, the duration and amplitude of muscle activity during swallowing were negatively correlated with the rating scales, indicating that a shorter duration and smaller activity of muscle activity corresponds to easier swallowing. Consequently, the duration and amplitude of suprahyoid and infrahyoid muscle activity measured by surface EMG would be a useful indicator of the easy-to-swallow performance. [source] Identifying high maintenance legacy softwareJOURNAL OF SOFTWARE MAINTENANCE AND EVOLUTION: RESEARCH AND PRACTICE, Issue 6 2002Matthew S. Harrison Abstract Legacy software maintenance is a significant cost item for many engineering organizations. This study is a preliminary report on work to investigate maintenance data, usage, and source code for legacy software used by an engineering design company to support a variety of functions, including electromagnetic, thermal, mechanical loading, vibration, and aerodynamic analysis. The results verify the applicability to legacy engineering software of previous research that concluded that size and structural metrics alone are not good indicators of high maintenance costs. Unlike previous research, the study also evaluates the effect of program usage on maintenance cost. Over the three-year period of this study of 71 legacy engineering programs, 11 of the programs (15%) accounted for 80% of all maintenance and 67% of all program runs. The highest maintenance programs were not always the largest programs or the worst structured programs. 49% of the programs accounted for only 1% of total maintenance but 42% of the total lines of code (LOC) thus invalidating LOC as an indicator for maintenance cost. While additional work is needed to validate these findings across other organizations and other code sets, these preliminary results provide strong evidence that expected program usage can be a useful indicator of long-term maintenance cost. Copyright © 2002 John Wiley & Sons, Ltd. [source] Use of Agrobacterium expressing green fluorescent protein to evaluate colonization of sonication-assisted Agrobacterium -mediated transformation-treated soybean cotyledonsLETTERS IN APPLIED MICROBIOLOGY, Issue 5 2000K.R. Finer Colonization and infection of soybean cotyledons by Agrobacterium tumefaciens and subsequent elimination of bacteria from cotyledons were monitored using bacteria expressing green fluorescent protein (GFP). GFP provided a quick, non-destructive method to evaluate, in real time, Agrobacterium colonization of cotyledon surfaces as well as infection of internal cells. GFP was first detected 7 h following inoculation of the cotyledon. By 36 h, GFP expression was very intense, and was limited to the adaxial surface of the cotyledon. Expression of GFP also served as a useful indicator of successful elimination of the bacterium from plant tissue following antibiotic treatment. [source] Cerebral near infrared spectroscopy for the measurement of indocyanine green elimination in cirrhosisALIMENTARY PHARMACOLOGY & THERAPEUTICS, Issue 7 2000Therapondos Background: Indocyanine green (ICG) clearance is a useful indicator of hepatic function but most measurement methods are invasive. Aim: To validate a less invasive technique using cerebral near infrared spectrophotometry (NIRS) to measure ICG elimination, and to compare it with the established methods for the determination of ICG clearance in a group of normal controls and patients with cirrhosis. Method: NIRS was used to measure ICG elimination in 41 cirrhotic patients and nine healthy volunteers. The first 13 of the cirrhotic patients also had their ICG clearance measured by the conventional spectrophotometric technique. Results: NIRS ICG elimination rate (ICG-k) and spectrophotometry ICG-k values correlated strongly (r= 0.828, P < 0.001, n=13). There was a significant reduction in the mean NIRS-k in cirrhotic patients and within Child,Pugh classes A, B, and C (P < 0.001). Conclusion: Measurement of ICG elimination by the NIRS method is at least as reliable as the conventional spectrophotometric technique in normals and in patients with cirrhosis. This technique merits further development for use as a bedside, less invasive liver function test. [source] Measuring Conditional Persistence in Nonlinear Time Series,OXFORD BULLETIN OF ECONOMICS & STATISTICS, Issue 3 2007George Kapetanios Abstract The persistence properties of economic time series have been a primary object of investigation in a variety of guises since the early days of econometrics. Recently, work on nonlinear modelling for time series has introduced the idea that persistence of a shock at a point in time may vary depending on the state of the process at that point in time. This article suggests investigating the persistence of processes conditioning on their history as a tool that may aid parametric nonlinear modelling. In particular, we suggest that examining the nonparametrically estimated derivatives of the conditional expectation of a variable with respect to its lag(s) may be a useful indicator of the variation in persistence with respect to its past history. We discuss in detail the implementation of the measure and present a Monte Carlo investigation. We further apply the persistence analysis to real exchange rates. [source] Clinical Significance of the Atrial Fibrillation Threshold in Patients with Paroxysmal Atrial FibrillationPACING AND CLINICAL ELECTROPHYSIOLOGY, Issue 5 2001KEIJI INOUE INOUE, K., et al.: Clinical Significance of the Atrial Fibrillation Threshold in Patients with Paroxysmal Atrial Fibrillation. AF threshold and the other electrophysiological parameters were measured to quantify atrial vulnerability in patients with paroxysmal atrial fibrillation (PAF, n = 47), and those without AF (non-PAF, n = 25). Stimulations were delivered at the right atrial appendage with a basic cycle length of 500 ms. The PAF group had a significantly larger percentage of maximum atrial fragmentation (%MAF, non-PAF: mean ± SD = 149 ± 19%, PAF: 166 ± 26%, P = 0.009), fragmented atrial activity zone (FAZ, non-PAF: median 0 ms, interquartile range 0,20 ms, PAF: 20 ms, 10,40 ms, P = 0.008). Atrial fibrillation threshold (AF threshold, non-PAF: median 11 mA, interquartile range 6,21 mA, PAF: 5 mA, 3,6 mA, P < 0.001) was smaller in the PAF group than in the non-PAF group. Sensitivity, specificity, and positive predictive value of electrophysiological parameters were as follows, respectively: %MAF (cut off at 150%, 78%, 52%, 76%), FAZ (cut off at 20 ms, 47%, 84%, 85%), AF threshold (cut off at 10 mA, 94%, 60%, 81%). There were no statistically significant differences between the non-PAF and PAF groups in the other parameters (effective refractory period, interatrial conduction time, maximum conduction delay, conduction delay zone, repetitive atrial firing zone, wavelength index), that were not specific for PAF. In conclusion, the AF threshold could be a useful indicator to evaluate atrial vulnerability in patients with AF. [source] Using Affective Attitudes to Identify Christian Fundamentalism: The Ten Commandments Judge and Alabama PoliticsPOLITICS & POLICY, Issue 5 2010THOMAS SHAW This article develops a new and useful indicator to aid in identifying Christian fundamentalism. "Affect" measures individuals' affective attitudes toward the role of Christian fundamentalists in Alabama politics. We demonstrate the analytic utility of this indicator by quantitatively comparing it to other more traditional and direct measures of fundamentalism, such as belief in the Bible as the literal word of God, self-identification as a fundamentalist, and whether one considers oneself to be "born again." We then compare the utility of these different measures of Christian fundamentalism in explaining electoral support for the archetype Christian fundamentalist political candidate, the "Ten Commandments Judge" Roy Moore, former chief justice of the Alabama Supreme Court. We find that our affect indicator compares well to other measures of fundamentalism and actually outperforms all of the more traditional measures in explaining support for Moore. Data used in the analysis come from a public opinion poll conducted by the USA Polling Group in April 2006. Este artículo desarrolla un nuevo y útil indicador para ayudar a identificar el fundamentalismo cristiano. "Afecto" mide las actitudes afectivas de los individuos hacia el rol de los cristianos fundamentalistas en la política de Alabama. Demostramos la utilidad analítica de este indicador al compararlo cuantitativamente con otras medidas más tradicionales y directas del fundamentalismo, tales como la creencia de la Biblia como la palabra literal de Dios, auto-identificación como fundamentalista, y si uno se considera a uno mismo "nacido de nuevo." Después comparamos la utilidad de estas diferentes medidas del fundamentalismo cristiano para explicar el apoyo electoral al candidato político cristiano fundamentalista arquetípico: Roy Moore, "Juez de los Diez Mandamientos," ex-presidente del tribunal de la Corte Suprema de Alabama. Encontramos que nuestro indicador Afecto se equipara con otras medidas del fundamentalismo y en realidad supera a todas las más tradicionales mediciones que explican el apoyo a Moore. La información utilizada en el análisis proviene de una encuesta de opinión pública realizada por el USA Polling Group en Abril del 2006. [source] ADAM12: a novel first-trimester maternal serum marker for Down syndromePRENATAL DIAGNOSIS, Issue 13 2003Jennie Laigaard Abstract Objectives The concentration of bioavailable insulin-like growth factor (IGF) I and II is important to foetal growth. It is regulated by insulin-like growth factor binding proteins (IGFBP) 1 through 6. Proteolytic cleavage of IGFBP-3 takes place in human pregnancy serum; accordingly, IGFBP-3 serum levels decrease markedly during pregnancy. ADAM12 (A disintegrin and metalloprotease) is an IGFBP-3 and IGFBP-5 protease and is present in human pregnancy serum. The goal of this study was to determine whether ADAM12 concentration in maternal serum is a useful indicator of foetal health. Methods We developed an enzyme-linked immunosorbent assay (ELISA) for the quantification of ADAM12 in serum. The assay range was 42 to 667 µg/L. Recombinant ADAM12 was used as the standard for calibration. Results We found that ADAM12 was highly stable in serum. Serum concentration increased from 180 µg/L at week 8 of pregnancy to 670 µg/L at 16 weeks, and reached 12 000 µg/L at term. In 18 first-trimester Down syndrome pregnancies, the concentration of ADAM12 was decreased, thus the median multiple of mean (MoM) value was 0.14 (0.01,0.76). A detection rate for foetal Down syndrome of 82% for a screen-positive rate of 3.2% and a 1:400 risk cut-off was found by Monte Carlo estimation using ADAM12 and maternal age as screening markers. Conclusion ADAM12 is a promising marker for Down syndrome. Copyright © 2003 John Wiley & Sons, Ltd. [source] Baseline Leptin Levels Predict Change in Leptin Levels During Weight Loss in Obese Breast Cancer SurvivorsTHE BREAST JOURNAL, Issue 2 2007Ananda Sen PhD Abstract:, Leptin is an adipocyte-derived hormone involved in regulation of satiety, and it also appears to have a role in breast cancer risk. Leptin therefore might be a useful indicator of the potential preventive effects of weight loss in breast cancer survivors. In this study we examined whether the change in leptin levels could be predicted by weight loss in obese breast cancer survivors. The subjects in this study were participating in a randomized trial of an individualized approach towards weight loss in Detroit, MI. Breast cancer survivors (body mass index of 30,44 kg/m2) were enrolled and fasting blood samples were obtained for leptin analysis over 1 year of study. Leptin levels were available from at least two time points for 36 women, and weight change ranged from a gain of 11% to a loss of 25% of baseline weight. Using a repeated-measures regression model, both baseline leptin level and concurrent percent body fat were found to synergistically predict leptin levels. Thus, for women with the same body fat, those with higher baseline leptin levels are predicted to exhibit smaller decreases in leptin with weight loss. Similar results were obtained for body weight and body weight change, but the associations with body fat were stronger. Breast cancer survivors with initially higher leptin levels may differ with regard to regulation of change in leptin during weight loss resulting in relatively smaller changes in leptin with equivalent amounts of weight loss. [source] Optimal management of the rare Gladiolus imbricatus in Estonian coastal meadows indicated by its population structureAPPLIED VEGETATION SCIENCE, Issue 2 2007Mari Moora Tutin et al. (1972 a.f.) Abstract Questions: What is the best grassland management regime for the threatened plant species Gladiolus imbricatus; is the stage structure of local populations a feasible indicator of the effect of changed management. Location: Coastal meadow system in southwestern Estonia. Methods: The effect of five management regimes was studied in a long-term (three-year) field experiment: (1) mowing in late July, (2) grazing by cattle, (3) grazing by sheep, (4) sheep grazing during the first year and mowing during subsequent years, (5) no management (control). Results: The population density increased significantly in response to the mowing treatment and to the mowing after sheep grazing treatment. The proportion of grazed plant individuals was higher in the sheep-grazed than in the cattle-grazed treatment. Generative and vegetative adult individuals of G. imbricatus were significantly more damaged by cattle herbivory than juveniles. All management regimes shifted the population structure towards a dynamic state where juvenile stages dominate, while the not managed control retained a regressive population structure. Conclusions: Population stage structure was a useful indicator of different management conditions, even in the case where population density did not differ. As indicated by population stage structure, the best management regime for G. imbricatus was either mowing in late July only, or alternation of grazing and mowing in different years. [source] | ||||||||||||||||||||||||||||||||||