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Steric
Terms modified by Steric Selected AbstractsSteric and Electronic Effects on an Antibody-Catalyzed Diels,Alder ReactionHELVETICA CHIMICA ACTA, Issue 12 2002Yael Gozin A series of substituted thiophene dioxides was tested as diene substrates for the antibody 1E9, which was elicited with a hexachloronorbornene derivative and normally catalyzes the inverse electron-demand Diels,Alder reaction between 2,3,4,5-tetrachlorothiophene dioxide (TCTD) and N -ethylmaleimide (NEM). Previous structural and computational studies had suggested that the catalytic efficiency of this system derives in part from a very snug fit between the apolar active site and the transition state of this reaction. Nevertheless, replacing all the Cl-atoms in the hapten with Br-atoms leads to no loss in affinity (Kd=0.1,nM), indicating substantial conformational flexibility in the residues that line the binding pocket. Consistent with this observation, the 2,3,4,5-tetrabromothiophene dioxide is a good substrate for the antibody (kcat=1.8,min,1, KNEM=14,,M), despite being considerably larger than TCTD. In contrast, normal electron-demand Diels,Alder reactions between NEM and unsubstituted thiophene dioxide or 2,3,4,5-tetramethylthiophene dioxide, which are much smaller or nearly isosteric with TCTD, respectively, are not detectably accelerated. These results show that the electronic properties of the 1E9 active site are optimized to a remarkable degree for the inverse electron-demand Diels,Alder reaction for which it was designed. Indeed, they appear to play a more important role in catalysis than simple proximity effects. [source] Convenient General Asymmetric Synthesis of Roche Ester Derivatives through Catalytic Asymmetric Hydrogenation: Steric and Electronic Effects of LigandsADVANCED SYNTHESIS & CATALYSIS (PREVIOUSLY: JOURNAL FUER PRAKTISCHE CHEMIE), Issue 16 2008Cyrielle Pautigny Abstract An efficient and concise asymmetric hydrogenation of acrylate esters promoted by the cationic ruthenium monohydride complex [Ru(H)(,6 -cot)SYNPHOS]+BF4, is reported. A full investigation of the effects of catalyst precursors, solvents, temperature, hydrogen pressure, substrates as well as steric and electronic properties of ligands was carried out. The corresponding valuable Roche ester derivatives were obtained in good to excellent isolated yields and high enantioselectivities under mild conditions. The robustness and practicability of this highly enantioselective hydrogenation was demonstrated by the synthesis of the 3-hydroxy-2-methylpropanoic acid tert -butyl ester on a multigram scale, resulting in excellent yield and ee up to 94%. [source] Additive interactions in the stabilization of film grade high-density polyethylene.JOURNAL OF VINYL & ADDITIVE TECHNOLOGY, Issue 2 2002Part I: Stabilization, influence of zinc stearate during melt processing The melt stabilization activity of some of the most commercially significant phenolic antioxidants and phosphites (alone and in combination), without and with zinc stearate, was studied in high-density polyethylene (HDPE) produced by Phillips catalyst technology. Multiple pass extrusion experiments were used to degrade the polymer melt progressively. The effect of stabilizers was assessed via melt flow rate (MFR) and yellowness index (YI) measurements conducted as a function of the number of passes. The level of the phenolic antioxidant remaining after each extrusion was determined by high-performance liquid chromatography (HPLC). Phenolic antioxidants and phosphites both improved the melt stability of the polymer in terms of elt viscosity retention; the influence of zinc stearate was found to be almost insignificant. However, phosphites and zinc stearate decreased the discoloration caused by the phenolic antioxidants. A correlation was found between the melt stabilization performance of phosphites and their hydroperoxide decomposition efficiency determind via a model hydroperoxide compound. Steric and electronic effects associated with the phosphorus atom influenced the reactivity towards hydroperoxides. Furthermore, high hydrolytic stability did not automatically result in lower efficiency. Besides phosphite molecular structure, stabilization activity was also influenced by the structure of the primary phenolic antioxidant and the presence of zinc stearate. [source] Superelectrophilic Activation of N -Substituted Isatins: Implications for Polymer Synthesis, a Theoretical StudyMACROMOLECULAR THEORY AND SIMULATIONS, Issue 2 2009Daniel Romero Nieto Abstract The stability and reactivity of mono- and multi-protonatred N -substituted isatin derivatives were studied at PBE0/aug-cc-pvtz//PBE0/6-31+G** level of theory in triflic acid (TFSA) solution. Calculations showed that the monocationic intermediates are the principal reactive species in the reaction of hydroxyalkylation of isatin derivatives in TFSA media. Electron-withdrawing substituents on the nitrogen atom increase the reactivity of isatin-containing electrophiles towards aromatic hydrocarbons, in accordance with their expected electronic influence. Steric factors also play an important role in the reactivity of isatin-containing electrophiles, especially in the second reaction step, due to their more sterically hindered reactive center. [source] ChemInform Abstract: Sterically Demanding, Sulfonated, Triarylphosphines: Application to Palladium-Catalyzed Cross-Coupling, Steric and Electronic Properties, and Coordination Chemistry.CHEMINFORM, Issue 29 2008Lucas R. Moore Abstract ChemInform is a weekly Abstracting Service, delivering concise information at a glance that was extracted from about 200 leading journals. To access a ChemInform Abstract of an article which was published elsewhere, please select a "Full Text" option. The original article is trackable via the "References" option. [source] DFT-Based Pseudo-Jahn,Teller Coupling Studies on the Steric and Energetic Lone Pair Effect of Four- and Five-Coordinate Halide Molecules and Complexes with Central Ions from the Fifth, Sixth, and Seventh Main Groups.CHEMINFORM, Issue 22 2004M. Atanasov No abstract is available for this article. [source] Assessing the Potential of Zwitterionic NHC·CS2 Adducts for Probing the Stereoelectronic Parameters of N-Heterocyclic CarbenesEUROPEAN JOURNAL OF INORGANIC CHEMISTRY, Issue 13 2009Lionel Delaude Abstract Five imidazol(in)ium-2-dithiocarboxylates bearing cyclohexyl, mesityl, or 2,6-diisopropylphenyl substituents on their nitrogen atoms were prepared from the corresponding N-heterocyclic carbenes (NHCs) by reaction with carbon disulfide. They were characterized by IR, UV/Vis, and NMR spectroscopy, and by thermogravimetric analysis. Their molecular structures were determined by X-ray diffraction. For the sake of comparison, tricyclohexylphosphonium dithiocarboxylate was also examined. The data acquired were scrutinized to evaluate their usefulness for assessing the steric and electronic properties of NHC ligands. Because of their outstanding ability to crystallize, the five NHC·CS2 betaines were found to be highly suitable for probing the steric influence of nitrogen atom substituents on imidazolylidene-based ligand precursors via XRD analysis, while the corresponding NHC·CO2 adducts were deemed more appropriate for evaluating the ,-donating properties of carbene ligands.(© Wiley-VCH Verlag GmbH & Co. KGaA, 69451 Weinheim, Germany, 2009) [source] Fine-Tuning Ligands for Catalysis Using Supramolecular StrategiesEUROPEAN JOURNAL OF INORGANIC CHEMISTRY, Issue 29 2007Vincent F. Slagt Abstract Coordinative bonds have been used to prepare supramolecular ligands leading to well-defined catalysts formed by assembly. The construction of these ligands is based on selective metal,ligand interactions between nitrogen donor atoms of phosphorus-nitrogen building blocks and various zinc(II) porphyrins. The major advantage of this supramolecular approach of catalyst preparation is the simplification of ligand variation enabling straightforward modification of steric, electronic and chiral properties of the supramolecular ligand. A large number of new ligands becomes accessible by this modular variation of the building blocks. The ligand assembly based on pyridyl phosphites and zinc(II) porphyrin with electron-withdrawing substituents led to a twelve-fold increase in activity and an increase in enantioselectivity from 17 to 50,% in the rhodium-catalyzed hydrogenation of dimethyl itaconate. The first examples of assemblies based on non-chiral ligands and chiral zinc(II) porphyrin template molecules show, as proof of principle, an enantiomeric excess up to 18,% in the asymmetric palladium-catalyzed allylic alkylation. (© Wiley-VCH Verlag GmbH & Co. KGaA, 69451 Weinheim, Germany, 2007) [source] NMR Study of L-Shaped (Quinoxaline)platinum(II) Complexes , Crystal Structure of [Pt(DMeDPQ)(bipy)](PF6)2EUROPEAN JOURNAL OF INORGANIC CHEMISTRY, Issue 23 2004Enrico Rotondo Abstract A 1H and 13C NMR study of nine PtII complexes of DMeDPQ [6,7-dimethyl-2,3-bis(2-pyridyl)quinoxaline] and BDPQ [2,3-bis(2-pyridyl)benzo[g]quinoxaline], and the crystal structure of one of them, are reported. The results are consistent with Cs symmetry of "L-shaped square-planar complexes". The rigid seven-membered chelated quinoxaline ligand holds the fused aromatic rings nearly perpendicular to the PtII coordination plane, generating the peculiar L-shaped structure. Ancillary ligands in the residual coordination sites are: a) bidentate flexible-planar 2,2,-bipyridine (bipy; complexes 1 and 2); b) bidentate rigid-planar dipyrido[3,2- a:2,3,- c]phenazine (dppz) or benzo[b]dipyrido[3,2- h:2,,3,- j]phenazine (bdppz; complexes 3,6); or c) 3-substituted monodentate pyridines (3-Rpy; complexes 7,9). The L-shaped geometry has been exploited to gain insight into the steric and dynamic features that regulate the noncovalent interactions of these square-planar complexes with DNA. We have shown previously, for [Pt(bipy)(n -Rpy)2]2+, that bipy twisting can be frozen out on the NMR timescale below 260 K. Preservation of the Cs symmetry at low temperature indicates a lack of bipy fluxionality within these L-shaped structures. The static butterfly-like symmetric orientation of the quinoxaline pyridyl rings accounts for the hampered twisting of Pt(bipy), which is otherwise assisted by the synchronous "windscreen wiper" conrotatory rocking of the ancillary pyridine rings. The L-geometry can also be used to monitor the ancillary n -Rpy rotation by NMR spectroscopy. The quasi-vertical quinoxaline pyridyl rings alignment leave room in the coordination plane for the crossing of the opposite pyridine rings, thereby reducing their rotational barriers about the Pt,N bond. (© Wiley-VCH Verlag GmbH & Co. KGaA, 69451 Weinheim, Germany, 2004) [source] Hydrogen Atom Transfer Experiments Provide Chemical Evidence for the Conformational Differences between C - and O -DisaccharidesEUROPEAN JOURNAL OF ORGANIC CHEMISTRY, Issue 27 2010Elisa I. León Abstract The glycopyran-6- O -yl radical promoted hydrogen atom transfer reaction (HAT) between the two pyranose units of ,- D -Manp -(1,4)-,- D -Glcp and ,- D -Manp -(1,4a)-4a-carba-,- D -Glcp disaccharides provides supporting chemical evidence for the conformational differences between O - and C -glycosyl compounds. In the O -disaccharide the 6-alkoxyl radical, generated under oxidative or reductive conditions, abstracts exclusively the hydrogen at C-5, via a completely regioselective 1,8-HAT reaction. This may be attributable to the conformational restriction of the glycosidic and aglyconic bonds due principally to steric and stereoelectronic effects. On the contrary, very little regioselectivity is observed in the homologous C -disaccharide and a mixture of compounds generated by 1,5-, 1,6-, and 1,8-HAT processes where the abstraction occurs at hydrogen atoms positioned at C-4a, C-1,, and C-5,, respectively, has been obtained. This study has been extended to simpler O - and C -glycosides, where the aglycon was a straight n -alkyl alcohol tether of five atoms; in general, all of the results obtained are shown to be consistent with a major conformational flexibility of the C -glycosidic bond. [source] Diels,Alder Reactions of Symmetrically 1,4-Disubstituted Dienes: Theoretical Study on the Influence of the Configuration of the Double Bonds on the Regio- and EndoselectivityEUROPEAN JOURNAL OF ORGANIC CHEMISTRY, Issue 18 2008Samira Baki Abstract It was experimentally shown in Diels-Alder reactions that symmetrically 1,4-disubstituted dienes exhibit high regio- and endoselectivity induced by the (E,Z) configuration of the double bonds. In order to understand the origin of this selectivity, the transition states associated with the reaction between a series of such dienes (R = OMe, CH3, NH2, F, CN) on substituted ethylene (R, = CO2Me, CN, F, OMe) were determined by DFT calculations. If the regioselectivity confirmed by a single-point MP2 calculation is predicted to be good in most cases, its direction remains difficult to predict; the R, group of the dienophile can orient itself toward either the (Z) or the (E) side of the diene. Neither primary nor secondary frontier orbital interactions appear to be able to rationalize these results. They are more likely explained by a delicate balance between steric and electrostatic interactions. This hypothesis is further supported by the calculated reactivity of the (E,E) and (Z,Z) corresponding dienes. In any case, a standard DFT calculation, confirmed by a single-point MP2 step, is likely to provide a reliable guideline for a synthesis strategy that allows the control of up to four stereogenic centres in a single reaction step.(© Wiley-VCH Verlag GmbH & Co. KGaA, 69451 Weinheim, Germany, 2008) [source] The Effects of Fluorine and Chlorine Substituents across the Fjords of Bifluorenylidenes: Overcrowding and StereochemistryEUROPEAN JOURNAL OF ORGANIC CHEMISTRY, Issue 22 2006Sergey Pogodin Abstract The bistricyclic aromatic enes (BAEs) (E)- and (Z)-1,1,-difluorobifluorenylidene, 1,8,1,,8,-tetrafluorobifluorenylidene, (E)- and (Z)-3,3,-difluorobifluorenylidene, 3,6,3,,6,-tetrafluorobifluorenylidene, and their chlorinated analogues were subjected to a DFT study of overcrowding in their fjord regions. The B3LYP hybrid functional was employed to calculate energies and geometries of the twisted conformations of these BAEs. The diastereomers E11,F2 and Z11,F2 have identical twist angles (, = 37.1°) and similar degrees of overcrowding, but differ in the degree and mode of pyramidalization, ,. In E11,F2, ,(C9) = +,(C9,) = 7.0° (syn -pyramidalization), while in Z11,F2, ,(C9) = ,,(C9,) = 1.0° (anti -pyramidalization). By contrast, in E11,Cl2 and Z11,Cl2, , = 40.6° and 42.7°, respectively. Introducing four halogen substituents results in higher twist angles: , = 40.3° in 181,8,F4 and 52.6° in 181,8,Cl4. Surprisingly, Z11,F2 is more stable than E11,F2 (,H298 = ,1.9 kJ/mol), whereas Z11,Cl2 is less stable than E11,Cl2 (,H298 = 2.2 kJ/mol). Both results are consistent with the experimental relative stabilities of these diastereomers. The unexpected stability of Z11,F2 is explained by a combination of steric and electronic effects. Calculations of Coulomb energies for point charge systems of atoms C, F, and H in the fjord regions shows stabilization of the (Z) diastereomer by ,45.5 kJ/mol. The dipole,dipole interactions in the fjord region destabilize Z11,F2 by 6.4 kJ/mol relative to E11,F2. Careful examination of the NMR spectra of E11,F2 and Z11,F2 shows, in the latter, evidence of long-range fluorine,fluorine coupling over seven bonds (11.4 Hz) and carbon,fluorine coupling over six bonds (4.8 Hz).(© Wiley-VCH Verlag GmbH & Co. KGaA, 69451 Weinheim, Germany, 2006) [source] Diastereoselective Reactions of the Tiglic Acid Functionality Mediated by Oxazolidine Chiral Auxiliaries: A Mechanistic Comparison of DMD andm -CPBA Epoxidations versus Singlet Oxygen and PTAD Ene ReactionsEUROPEAN JOURNAL OF ORGANIC CHEMISTRY, Issue 14 2005Aurelia Pastor Abstract 2,2-Dimethyloxazolidines have been utilized as chiral auxiliaries for the diastereoselective functionalization of the optically active tiglic acid derivatives (S)- 1 by means of epoxidation with DMD or m -CPBA and ene reactions with 1O2 or PTAD. In the DMD and m -CPBA epoxidations, high diastereoselectivities but opposite senses of diastereomer selection were observed. In contrast, the stereochemistry of the 1O2 and PTAD ene reactions depended on the size of the attacking enophile: whereas essentially perfect diastereoselectivity was obtained with PTAD, much lower stereoselection was observed with 1O2. The stereochemical results for the DMD and m -CPBA epoxidations and the PTAD ene reaction are explained in terms of the energy differences for the corresponding diastereomeric transition states, dictated by steric and electronic effects. The PTAD ene reaction for these tiglic acids (S)- 1 provides, after removal of the chiral auxiliaries, an attractive synthetic route for optically active ,-amino acid derivatives.(© Wiley-VCH Verlag GmbH & Co. KGaA, 69451 Weinheim, Germany, 2005) [source] Kinetics of inhibition of acetylcholinesterase in the presence of acetonitrileFEBS JOURNAL, Issue 8 2009Markus Pietsch The hydrolysis of acetylthiocholine by acetylcholinesterase from Electrophorus electricus was investigated in the presence of the inhibitors tacrine, gallamine and compound 1. The interaction of the enzyme with the substrate and the inhibitors was characterized by the parameters KI, ,,, b or ,, Km and Vmax, which were determined directly and simultaneously from nonlinear Michaelis,Menten plots. Tacrine was shown to act as a mixed-type inhibitor with a strong noncompetitive component (,, , 1) and to completely block deacylation of the acyl-enzyme. In contrast, acetylcholinesterase inhibition by gallamine followed the ,steric blockade hypothesis', i.e. only substrate association to as well as substrate/product dissociation from the active site were reduced in the presence of the inhibitor. The relative efficiency of the acetylcholinesterase,gallamine complex for the catalysis of substrate conversion was determined to be 1.7,25% of that of the free enzyme. Substrate hydrolysis and the inhibition of acetylcholinesterase were also investigated in the presence of 6% acetonitrile, and a competitive pseudo-inhibition was observed for acetonitrile (KI = 0.25 m). The interaction of acetylcholinesterase with acetonitrile and tacrine or gallamine resulted in a seven- to 10-fold increase in the KI values, whereas the principal mode of inhibition was not affected by the organic solvent. The determination of the inhibitory parameters of compound 1 in the presence of acetonitrile revealed that the substance acts as a hyperbolic mixed-type inhibitor of acetylcholinesterase. The complex formed by the enzyme and the inhibitor still catalysed product formation with 8.7,9.6% relative efficiency. [source] Theoretical study of the substituent effect on the intramolecular hydrogen bonds in di(4-hydroxycoumarin) derivativesINTERNATIONAL JOURNAL OF QUANTUM CHEMISTRY, Issue 6 2006Tzvetan Mihaylov Abstract Geometry optimization of ortho -, meta -, and para -pyridyl-substituted di(4-hydroxycoumarin) [di(4-HC)] was performed with the density functional theory (DFT) [B3LYP/6-31G(d)] method. Two asymmetrical intramolecular OH,O hydrogen bonds (HBs) stabilized the structures. The calculated single HB energies varied from ,62.56 to ,47.53 kJ mol,1 and pointed to a relative strong hydrogen bond in the systems studied. The 2- and 6-pyridyl substituents produced the largest geometrical changes in di(4-hydroxycoumarin) fragment. The highest total HB energy was found for 2-pyridyl-substituted and the lowest one for 6-pyridyl-substituted di(4-hydroxycoumarin). The HB energy variations were confirmed with rotational barrier method calculations. Both steric and electrostatic factors were found to be responsible for the HB asymmetry in the compounds studied. According to the molecular electrostatic potential (MEP) calculations the most preferred reactive site for electrophilic attack of pyridyl-substituted di(4-hydroxycoumarin)s are the pyridine nitrogen and the carbonyl oxygens, followed by the hydroxyl oxygens. © 2005 Wiley Periodicals, Inc. Int J Quantum Chem, 2006 [source] Convenient General Asymmetric Synthesis of Roche Ester Derivatives through Catalytic Asymmetric Hydrogenation: Steric and Electronic Effects of LigandsADVANCED SYNTHESIS & CATALYSIS (PREVIOUSLY: JOURNAL FUER PRAKTISCHE CHEMIE), Issue 16 2008Cyrielle Pautigny Abstract An efficient and concise asymmetric hydrogenation of acrylate esters promoted by the cationic ruthenium monohydride complex [Ru(H)(,6 -cot)SYNPHOS]+BF4, is reported. A full investigation of the effects of catalyst precursors, solvents, temperature, hydrogen pressure, substrates as well as steric and electronic properties of ligands was carried out. The corresponding valuable Roche ester derivatives were obtained in good to excellent isolated yields and high enantioselectivities under mild conditions. The robustness and practicability of this highly enantioselective hydrogenation was demonstrated by the synthesis of the 3-hydroxy-2-methylpropanoic acid tert -butyl ester on a multigram scale, resulting in excellent yield and ee up to 94%. [source] Conceptual DFT properties-based 3D QSAR: Analysis of inhibitors of the nicotine metabolizing CYP2A6 enzymeJOURNAL OF COMPUTATIONAL CHEMISTRY, Issue 12 2009Sofie Van Damme Abstract Structure-activity relationships of 46 P450 2A6 inhibitors were analyzed using the 3D-QSAR methodology. The analysis was carried out to confront the use of traditional steric and electrostatic fields with that of a number of fields reflecting conceptual DFT properties: electron density, HOMO, LUMO, and Fukui f, function as 3D fields. The most predictive models were obtained by combining the information of the electron density with the Fukui f, function (r2 = 0.82, q2 = 0.72), yielding a statistically significant and predictive model. The generated model was able to predict the inhibition potencies of an external test set of five chemicals. The result of the analysis indicates that conceptual DFT-based molecular fields can be useful as 3D QSAR molecular interaction fields. © 2008 Wiley Periodicals, Inc. J Comput Chem 2009 [source] Global physicochemical properties as activity discriminants for the mGluR1 subtype of metabotropic glutamate receptorsJOURNAL OF COMPUTATIONAL CHEMISTRY, Issue 16 2001Marta Filizola Abstract Metabotropic glutamate receptors (mGluRs) are important as candidate therapeutic targets for many neurological disorders. In the present work, the focus has been on the mGluR1 subtype, where agonists have a proconvulsant profile while antagonists exert anticonvulsant activity. Identification of molecular determinants for the inhibition of mGluR1 provides a new avenue for the discovery and development of novel anticonvulsant drugs. Spatial configuration of key groups alone cannot explain activation selectivity at this specific receptor subtype. In fact, all known agonists and antagonists acting at mGluR1 can accommodate the same critical moieties in a similar geometric arrangement that corresponds to the extended conformation of glutamate. Therefore, other factors must account for the differences in activation. This study presents the results of an analysis of a large suite of steric, topological, electrostatic, and thermodynamic molecular properties calculated for a representative set of potent mGluR1 agonists and antagonists. Global steric parameters and the total nonpolar area provide discrimination between the mGluR1 agonists and antagonists considered in the present work. © 2001 John Wiley & Sons, Inc. J Comput Chem 22: 2018,2027, 2001 [source] Investigations on regio- and stereoselectivities in cycloadditions involving ,- (3-pyridyl)- N -phenylnitrone: Development of an efficient route to novel nicotine analogsJOURNAL OF HETEROCYCLIC CHEMISTRY, Issue 6 2005Gurpinder Singh Thermal reactions of hitherto ,-(3-pyridyl)- N -phenylnitrone (1) with mono-substituted electron-rich and electron-neutral dipolarophiles are regio-, and stereo-selective (exo -selective), controlled by LUMO - dipole - HOMO- dipolarophile interaction, and furnish syn -5-substituted-3-(3-pyridyl)-isoxazolidines (5) in high yields. With electron deficient dipolarophiles such as acrylonitrile there is observed a loss of regioselectivity as well as stereoselectivity and the regioselectivity is reversed in reactions with methyl vinyl ketone and methyl acrylate, due to intervention of HOMO-dipole - LUMO-dipolarophile interaction, affording 4-substi-tuted-3-(3-pyridyl)-isoxazolidines (7) as major products. Reactions of nitrone (1) with disubstituted dipolarophiles such as methyl methacrylate and ethyl coronate furnish methyl syn -5-methy-3-pyridyl-1-phenyl-isoxazolidine-5-carboxylate (8) and ethyl anti -5-methy-3-pyridyl-1-phenyl-isoxazolidine-4-carboxylate (10), respectively, in high yields. Reaction with N -Phenylmaleimide affords novel isoxazolidino-pyrro-lidinediones bearing a 3-pyridyl moiety (11, 12). A mechanistic rationalization of the obtained results in terms of electronic, steric and secondary interactions is proffered. [source] Palladium catalyzed cross-methylation of bromoheterocycles with intramolecularly stabilized dimethyl indium reagentsJOURNAL OF HETEROCYCLIC CHEMISTRY, Issue 4 2003Nimer Jaber Although the intramolecularly stabilized [(3-dimethylamino)propyl]dimethylaluminum (1a) fails to undergo palladium-catalyzed cross-coupling with bromopyridines and with bromofuran derivatives, the analogous gallium and indium reagent 1b and 1c smoothly cross-methylate these and other bromoheterocycles. The cross-coupling can be performed also with the dimeric indium and gallium compounds bis(,-[2-(dimethylamino)ethanolato- N,O:O]tetramethyldigallium and -diindium (2b and 2c, respectively). The indium reagent is fairly air-stable and the reactions can be carried out under ambient conditions. The yields are generally very high but are influenced by steric and electronic effects. [source] Conformational properties of thiophene oligomersJOURNAL OF HETEROCYCLIC CHEMISTRY, Issue 4 2000Salvatore Millefiori The molecular geometries and the torsional potentials about the inter-ring C-C bond in ,-oligothiophenes (,-nTh, n=2,4) have been calculated by means of conventional ab initio and density functional theory (DFT) calculations employing the hybrid B3LYP and BH&HLYP functionals. The position and the energetics of the critical points in the potential energy curve generated by rotation about the inter-ring CC bond are shown to be dependent on the computational method. DFT calculations, in comparison with MP2 calculations, favour conjugative interactions, while steric and coulombic interactions are equally treated by both methods. On oligomerization the electron delocalisation increases slightly, the p-charge being preferentially confined within the rings, although it is sufficient to move the molecular structure towards co-planarization and to increase the barrier through the perpendicular conformation. The IR and Raman spectra on the relevant rotamers of ,-2Th have been computed at HF/6,31G* and B3LYP/6,31G* levels. The comparison with the experiment is excellent. It has been found that small twisting from the planar conformation has no apparent effects, while 90° twisting and isomerization to the syn-gauche form produce significant frequency and intensity variations which could be useful probes in conformational studies. The simulated IR and Raman spectra of the ,-2Th rotamers are consistent with a small,-electron delocalisation between the rings. [source] Protein ion-exchange adsorption kineticsAICHE JOURNAL, Issue 7 2001J. A. Wesselingh The kinetics of the adsorption of the protein BSA on the ion exchanger Q-Sepharose FF were measured for several values of the pH and ionic strength, using several techniques. The measurements were best described with a model incorporating both surface and pore diffusion and with the chemical potential gradient as the driving force for diffusion. The surface-diffusion coefficients from this model show an inverse exponential dependency on the binding strength. This dependency can be explained by an activated jump mechanism. The pore-diffusion coefficient is much lower than that in free solution, which is probably caused by a combination of steric and electric exclusion. [source] The effective hard particle model provides a simple, robust, and broadly applicable description of nonideal behavior in concentrated solutions of bovine serum albumin and other nonassociating proteinsJOURNAL OF PHARMACEUTICAL SCIENCES, Issue 12 2007Allen P. Minton Abstract Published data on the concentration dependence of osmotic pressure of solutions of bovine serum albumin in 0.15 M NaCl at concentrations up to greater than 400 g/L are shown to be described to within experimental uncertainty by a simple one-parameter model in which protein molecules are represented by effective hard spherical particles. The volume of the effective hard particle reflects both steric and electrostatic repulsion and thus varies with pH and ionic strength. The pH dependence of the effective volume is shown to agree well with that previously obtained from analysis of the concentration dependence of sedimentation equilibrium and static light scattering. © 2007 Wiley-Liss, Inc. and the American Pharmacists Association J Pharm Sci 96: 3466,3469, 2007 [source] Novel, cell-penetrating molecular transporters with flexible backbones and permanently charged side-chainsJOURNAL OF PHARMACY AND PHARMACOLOGY: AN INTERNATI ONAL JOURNAL OF PHARMACEUTICAL SCIENCE, Issue 8 2007N. Bodor Various cell-penetrating peptides have been discovered recently that can translocate across plasma membranes and can even carry large cargo molecules into the cells. Because under physiological conditions most of these peptides carry considerable positive charges due to the presence of basic amino acids such as arginine, we decided to investigate whether molecular transporters composed of permanently charged side-chains also possess such cell penetrating ability. Arginine-rich oligomers that have a backbone with increased flexibility due to incorporation of non-,-amino acids (,-aminocaproic acid) have been found to be effective molecular transporters. Here, we report the preparation of analogue structures by replacing the arginine residues with the quaternary form of a novel redox amino acid (Nys+) that contain a trigonelline moiety; it has already been shown possible to replace the original basic amino acid side-chain of neuropeptides without significant activity-loss due to the sufficiently close steric and electronic analogy between the new Nys+ and the original side-chains (in their protonated form, e.g., Arg+, Lys+). A nonamer analogue showed transporter activity resulting in increased cellular uptake in human carcinoma (HeLa) cells. [source] Ortho effect and steric inhibition of resonance: basicities of methyl-substituted acetophenones,JOURNAL OF PHYSICAL ORGANIC CHEMISTRY, Issue 10 2003Eva Otyepková Abstract The basicity of 12 methyl-substituted acetophenones was measured spectrophotometrically in 46,90 vol.% sulfuric acid. The acidity function was constructed and the pKa values were calculated by a new algorithm proposed by Pytela. The substituent effects were divided into polar and steric, assuming that the former are approximately equal in the ortho and para positions. Polar effects of the methyl group bring about stronger basicity as expected; the effect is more intense than the acid weakening in equally substituted benzoic acids. Steric effects of ortho methyl groups are base strengthening. This is not due to steric inhibition of resonance since the conformation remains planar in most derivatives. Two ortho methyl groups are necessary to distort the planarity; their steric effect is more than doubled compared with one methyl group. These results do not agree with the common idea of twisted conformations with gradually increasing twisting angle but are better rationalized by the existence of two groups of derivatives, planar and non-planar. Copyright © 2003 John Wiley & Sons, Ltd. [source] Homo- and copolymerization of ethylene and norbornene with bis(,-diketiminato) titanium complexes activated with methylaluminoxaneJOURNAL OF POLYMER SCIENCE (IN TWO SECTIONS), Issue 1 2008Yongfei Li Abstract Homo- and copolymerization of ethylene and norbornene were investigated with bis(,-diketiminato) titanium complexes [ArNC(CR3)CHC(CR3)NAr]2TiCl2 (R = F, Ar = 2,6-diisopropylphenyl 2a; R = F, Ar = 2,6-dimethylphenyl 2b; R = H, Ar = 2,6-diisopropylphenyl 2c; R = H, Ar = 2,6-dimethylphenyl 2d) in the presence of methylaluminoxane (MAO). The influence of steric and electric effects of complexes on catalytic activity was evaluated. With MAO as cocatalyst, complexes 2a,d are moderately active catalysts for ethylene polymerization producing high-molecular weight polyethylenes bearing linear structures, but low active catalysts for norbornene polymerization. Moreover, 2a,d are also active ethylene,norbornene (E,N) copolymerization catalysts. The incorporation of norbornene in the E,N copolymer could be controlled by varying the charged norbornene. 13C NMR analyses showed the microstructures of the E,N copolymers were predominantly alternated and isolated norbornene units in copolymer, dyad, and triad sequences of norbornene were detected in the E,N copolymers with high incorporated content of norbornene. © 2007 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 46: 93,101, 2008 [source] Exploring pathways to reduce the distribution of active sites in the Ziegler,Natta polymerization of propyleneJOURNAL OF POLYMER SCIENCE (IN TWO SECTIONS), Issue 17 2007David Ribour Abstract Chemical treatments of classical supported Ziegler,Natta precatalysts were conducted by using additional bulky ligands to attempt to narrow and homogenize the active sites distribution in propylene polymerization. Additions of monodentate ligands such as bis(trimethylsilyl)amide, cyclopentadienyl derivates or triphenylsilanol were seen to slow down the polymerization without modifying the distribute properties of polypropylenes. In the case of multidentate ligands (porphines or biquinolines), in addition to the poisoning of active sites, an extraction of titanium from the catalyst surface is observed. A decrease of both melting point and isotacticity (II%) of polymers using these compounds suggest that the most isospecific titanium sites are first extracted from the MgCl2 -surface. The narrowing of the molecular weight distribution confirms that the highly isospecific sites are the most active sites, producing the higher molecular weight polymers. Moreover, this study shows that the distributed properties of polymers are due to the chemical diversity of the active sites with various steric and electronic environments at the catalyst surface and not to mass transfer limitations. © 2007 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 45: 3941,3948, 2007 [source] Raman spectra of putrescine, spermidine and spermine polyamines and their N -deuterated and N -ionized derivativesJOURNAL OF RAMAN SPECTROSCOPY, Issue 5 2003A. M. Amorim da Costa Abstract The experimental and calculated Raman spectra of the N -hydrogenated and N -deuterated biogenic polyamines putrescine, spermidine and spermine and of their N -hydrogenated and N -deuterated hydrochloride salts in the 2000,3400 cm,1 spectral region (at distinct temperatures) are reported and analysed. A complete assignment of the N,H, C,H and N,D stretching modes is carried out, in the light of both steric and hydrogen-bonding interactions on the conformational behaviour of these systems. Copyright © 2003 John Wiley & Sons, Ltd. [source] Six novel mutations including triple heterozygosity for Phe31Ser, 514delT and 516T,G factor X gene mutations are responsible for congenital factor X deficiency in patients of Nepali and Indian originJOURNAL OF THROMBOSIS AND HAEMOSTASIS, Issue 7 2005G. JAYANDHARAN Summary., Factor X (FX) deficiency is a rare (1 : 100000) autosomal recessive disorder caused by heterogeneous mutations in FX gene. We have studied the molecular basis this disease in six Indian and one Nepali patients. Diagnosis was confirmed by measuring the FX coagulant activity (FX: C) using a PT based assay. Six of them had a FX: C of < 1% and one patient had 24% coagulant activity. Mutations were identified in all the seven patients. These included eight (88.8%) missense and one frame-shift (11.2%) mutations of which six were novel. Three of the novel mutations, a Phe31Ser affecting ,Gla' domain and 514delT and 516T,G mutations affecting Cys132 in ,connecting region' were identified in a triple compound heterozygous state in a Nepali patient presenting with a severe phenotype. Two other novel mutations, Gly133Arg, may affect the disulphide bridge between Cys132-Cys302 in the connecting region while Gly223Arg may perturb the catalytic triad (His236, Asp282 and Ser379). The other novel mutation, Ser354Arg, involves the replacement of a small-buried residue by a large basic aminoacid and is likely to have steric or electrostatic effects in the pocket involving Lys351-Arg347-Lys414 that contributes to the core epitope of FXa for binding to FVa. Three previously reported mutations, Thr318Met; Gly323Ser; Gly366Ser were also identified. This is the first report of the molecular basis of FX deficiency in patients from the Indian subcontinent. [source] Liquid Crystalline Ordering and Charge Transport in Semiconducting MaterialsMACROMOLECULAR RAPID COMMUNICATIONS, Issue 14 2009Wojciech Pisula Abstract Organic semiconducting materials offer the advantage of solution processability into flexible films. In most cases, their drawback is based on their low charge carrier mobility, which is directly related to the packing of the molecules both on local (amorphous versus crystalline) and on macroscopic (grain boundaries) length scales. Liquid crystalline ordering offers the possibility of circumventing this problem. An advanced concept comprises: i) the application of materials with different liquid crystalline phases, ii) the orientation of a low viscosity high temperature phase, and, iii) the transfer of the macroscopic orientation during cooling to a highly ordered (at best, crystalline-like) phase at room temperature. At the same time, the desired orientation for the application (OLED or field-effect transistor) can be obtained. This review presents the use of molecules with discotic, calamitic and sanidic phases and discusses the sensitivity of the phases with regard to defects depending on the dimensionality of the ordered structure (columns: 1D, smectic layers and sanidic phases: 2D). It presents ways to systematically improve charge carrier mobility by proper variation of the electronic and steric (packing) structure of the constituting molecules and to reach charge carrier mobilities that are close to and comparable to amorphous silicon, with values of 0.1 to 0.7,cm2,·,V,1,·,s,1. In this context, the significance of cross-linking to stabilize the orientation and liquid crystalline behavior of inorganic/organic hybrids is also discussed. [source] | ||||||||||||||||||||||||||||||||||||||||