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Bacterial Numbers (bacterial + number)
Selected AbstractsThe effects of copper on the microbial community of a coral reef spongeENVIRONMENTAL MICROBIOLOGY, Issue 1 2001Nicole S. Webster Marine sponges often harbour communities of symbiotic microorganisms that fulfil necessary functions for the well-being of their hosts. Microbial communities associated with the sponge Rhopaloeides odorabile were used as bioindicators for sublethal cupric ion (Cu2+) stress. A combined strategy incorporating molecular, cultivation and electron microscopy techniques was adopted to monitor changes in microbial diversity. The total density of sponge-associated bacteria and counts of the predominant cultivated symbiont (,-proteobacterium strain NW001) were significantly reduced in response to Cu2+ concentrations of 1.7 µg l,1 and above after 14 days of exposure. The number of operational taxonomic units (OTUs) detected by restriction fragment length polymorphism (RFLP) decreased by 64% in sponges exposed to 223 µg l,1 Cu2+ for 48 h and by 46% in sponges exposed to 19.4 µg l,1 Cu2+ for 14 days. Electron microscopy was used to identify 17 predominant bacterial morphotypes, composing 47% of the total observed cells in control sponges. A reduction in the proportion of these morphotypes to 25% of observed cells was evident in sponges exposed to a Cu2+ concentration of 19.4 µg l,1. Although the abundance of most morphotypes decreased under Cu2+ stress, three morphotypes were not reduced in numbers and a single morphotype actually increased in abundance. Bacterial numbers, as detected using fluorescence in situ hybridization (FISH), decreased significantly after 48 h exposure to 19.4 µg l,1 Cu2+. Archaea, which are normally prolific in R. odorabile, were not detected after exposure to a Cu2+ concentration of 19.4 µg l,1 for 14 days, indicating that many of the microorganisms associated with R. odorabile are sensitive to free copper. Sponges exposed to a Cu2+ concentration of 223 µg l,1 became highly necrosed after 48 h and accumulated 142 ± 18 mg kg,1 copper, whereas sponges exposed to 19.4 µg l,1 Cu2+ accumulated 306 ± 15 mg kg,1 copper after 14 days without apoptosis or mortality. Not only do sponges have potential for monitoring elevated concentrations of heavy metals but also examining changes in their microbial symbionts is a novel and sensitive bioindicator for the assessment of pollution on important microbial communities. [source] Experimental acute respiratory Burkholderia pseudomallei infection in BALB/c miceINTERNATIONAL JOURNAL OF EXPERIMENTAL PATHOLOGY, Issue 1 2009Mark S. Lever Summary Burkholderia pseudomallei is the causative agent of melioidosis, which is considered a potential deliberate release agent. The objective of this study was to establish and characterise a relevant, acute respiratory Burkholderia pseudomallei infection in BALB/c mice. Mice were infected with 100 B. pseudomallei strain BRI bacteria by the aerosol route (approximately 20 median lethal doses). Bacterial counts within lung, liver, spleen, brain, kidney and blood over 5 days were determined and histopathological and immunocytochemical profiles were assessed. Bacterial numbers in the lungs reached approximately 108 cfu/ml at day 5 post-infection. Bacterial numbers in other tissues were lower, reaching between 103 and 105 cfu/ml at day 4. Blood counts remained relatively constant at approximately 1.0 × 102 cfu/ml. Foci of acute inflammation and necrosis were seen within lungs, liver and spleen. These results suggest that the BALB/c mouse is highly susceptible to B. pseudomallei by the aerosol route and represents a relevant model system of acute human melioidosis. [source] Modelling of Campylobacter survival in frozen chicken meatJOURNAL OF APPLIED MICROBIOLOGY, Issue 3 2007M. Ritz Abstract Aims:, To model the survival kinetics of Campylobacter jejuni on frozen chicken meat. Methods and Results:, Three different types of chicken meat surface (skin, skinned muscle and cut muscle) were inoculated with stationary phase cells of C. jejuni (8 log10 CFU cm,2) and frozen for 5 weeks at ,20°C. Bacterial numbers were determined weekly using two different methods of enumeration to quantify uninjured and injured cells. Analysis of variance of the results showed that the type of chicken surface and the method used to enumerate surviving cells were the most significant sources of variations in the numbers recovered (P < 0·0001), much more than the freezing time. To identify an appropriate model for the description of effects of freezing on survival over time, several models were fitted to the count data. Decay was found to be nonlinear. In general, survival was least on skin, better on skinned muscle and best on cut muscle. After 2 weeks, additional inactivation by freezing appeared to be negligible. Conclusion:, Because of the variability of survival it was not possible to fit and select a general model useful for all the different surfaces types. Significance and Impact of the Study:, The injured state of the cells leads to variability and the underestimation of bacterial survival. This is an essential factor for the assessment of Campylobacter -associated risk. [source] Relative Abundance and Species Composition of Gram-Negative, Aerobic Bacteria Associated with the Gut of Juvenile White Shrimp Litopenaeus vannamei Reared in Oligotrophic Well Water and Eutrophic Pond WaterJOURNAL OF THE WORLD AQUACULTURE SOCIETY, Issue 2 2000Shaun M. Moss Gut bacteria may contribute significantly to the growth and survival of cultured shrimp, although little is known about factors that affect bacterial community structure in shrimp guts. The objective of this study was to determine the abundance and species composition of gut bacteria in juvenile white shrimp Litopenaeus vannamei reared in two different environments. Eight 120-L tanks were stocked at a density of 8 shrimphank. Two treatments were tested for 10 d and consisted of tanks receiving flow-through water from one of two sources: 1) well water pumped from a sea-water aquifer (Well treatment), and 2) pond water pumped from an intensive shrimp pond (Pond treatment). Shrimp mid- and hindguts were excised on days 1, 3, 6, and 10 for enumeration of gram-negative, aerobic bacteria by quantifying colony-forming units (CFU) using standard microbiological plating techniques. Identification of bacterial isolates was made using the Biologa® GN Microplate system. Bacterial numbers were significantly greater (P > 0.05) in Well shrimp than in Pond shrimp on days 1 and 3. Following day 3, a decrease in bacterial numbers occurred in the Well shrimp, and no significant differences between treatments were observed on days 6 or 10. Guts from Well shrimp were dominated by Vibrio and Aero-monas, and these two genera accounted for 80,851 of the bacteria on each sampling day. Guts from Pond shrimp exhibited a greater bacterial diversity and were dominated by Vibrio, Aeromonas, and Pseudomonas. Flavobacterium were identified in the guts of Pond shrimp on days 3 and 10, but were not identified in any of the Well shrimp. A greater understanding of gut bacteria-shrimp interactions could lead to increased production and profitability for shrimp farmers through the development of more cost-effective feeds and novel disease control strategies. [source] Measurement of Horizontal and Vertical Movement of Ralstonia solanacearum in SoilJOURNAL OF PHYTOPATHOLOGY, Issue 10 2006M. Satou Abstract Two model systems were constructed to measure horizontal and vertical movement of bacteria in soil. These systems were applied to measuring movement of Ralstonia solanacearum (race 1, biovar 3), a causal agent of bacterial wilt of tomato, in andosol and sand at 28°C. The first system was used to measure horizontal movement of the bacteria in soil packed in a narrow horizontal frame. Suspension of the pathogen was applied to soil at one end of the frame, and bacterial number per gram of soil was measured over distance from the inoculation point after 4 days. Horizontal movement of R. solanacearum in supersaturated soil, but without flow, was possibly due to diffusion and the front advanced at 2.2 cm/day in andosol, and at 8.1 cm/day in sand. Using the same experimental system, but applying water inflow to one end of the frame only, the bacterium was detected at the front of water in andosol and sand. The front of the distribution advanced at 20.4 cm/h in andosol and 66.3 cm/h in sand. In the second experimental system, a cylinder of soil packed in a short tube was soaked with water, and soil at the top of the tube was inoculated with bacterial suspension. Immediately, soil cylinders were turned upward, and the bacterial number per gram of soil was measured along vertical distance from the inoculation point after 7 days. Using the system with andosol, the capillary water front rose to 32.5 cm over 7 days after inoculation, and R. solanacearum reached to 18.8 cm height. In sand, capillary water rose to 20.0 cm and the bacteria reached to 16.3 cm height. [source] Unsuitable distinction between viable and dead Staphylococcus aureus and Staphylococcus epidermidis by ethidium bromide monoazideLETTERS IN APPLIED MICROBIOLOGY, Issue 5 2009H. Kobayashi Abstract Aims:, The DNA-intercalating dye ethidium bromide monoazide (EMA) has recently been used as a DNA binding agent to differentiate viable and dead bacterial cells by selectively penetrating through the damaged membrane of dead cells and blocking the DNA amplification during the polymerase chain reaction (PCR). We optimized and tested the assay in vitro using Staphylococcus aureus and Staphylococcus epidermidis cultures to distinguish viable from dead bacteria, with the goal of reducing false positive PCR results. Methods and Results:, Viable and heat-inactivated bacteria were treated with EMA or left untreated before DNA extraction. A real-time PCR assay for the detection of the tuf gene in each DNA extract was used. Our results indicated that EMA influenced viable bacteria as well as dead bacteria, and the effect of EMA depended on the EMA concentration and bacterial number. Conclusions:, EMA is not a suitable indicator of bacterial viability, at least with respect to Staphylococcus species. Significance and Impact of the Study:, Determining the viability of pathogens has a major impact on interpreting the results of molecular tests for bacteria and subsequent clinical management of patients. To this end, several methods are being evaluated. One of these methods , intercalating DNA of dead bacteria by EMA , looked very promising, but our study found it unsatisfactory for S. aureus and coagulase-negative Staphylococci. [source] Roles of endogenous cytokines in liver apoptosis of mice in lethal Listeria monocytogenes infectionFEMS IMMUNOLOGY & MEDICAL MICROBIOLOGY, Issue 4 2000Tomisato Miura Abstract Various bacterial pathogens have been identified as mediators of apoptosis. Apoptosis reportedly shows both detrimental and beneficial effects on biological functions. We studied the role of liver apoptosis in lethal Listeria monocytogenes infection and the regulation of apoptosis by endogenous cytokines during infection. Apoptosis was observed in the spleen but not in the liver of infected mice, whereas the induction of liver necrosis was evident by rising levels of serum aminotransferases in these animals. Apoptosis was detected in the liver of L. monocytogenes -infected mice which had been treated with monoclonal antibody (mAb) against tumor necrosis factor-, (TNF-,) or interleukin-6 (IL-6), or in TNF-,,/, mice, but not in ,- interferon (IFN-,),/, mice or mice which had been treated with mAb against IL-4 or IL-10. Augmentation of liver apoptosis in mice treated with mAb against TNF-, or IL-6 or in TNF-,,/, mice correlated with the increase in bacterial numbers in the organ, while no augmentation of apoptosis was observed in the liver of IFN-,,/, mice irrespective of the marked increase in bacterial numbers in the organs, indicating that augmentation of liver apoptosis may not be merely due to the increase in bacterial growth in the organs. These results suggest that TNF-, and IL-6 may play an important role in protecting the liver from apoptosis in lethal L. monocytogenes infection. [source] The Choice of Standardisation Reveals a Significant Influence on the Dynamics of Bacterial Abundance in Newly Deposited River SedimentsINTERNATIONAL REVIEW OF HYDROBIOLOGY, Issue 3-4 2003Andreas H. Farnleitner Abstract After a high water event of the River Danube in April 1994, bacterial cell numbers were determined in newly formed deposits in a backwater near Hainburg (Lower Austria) within a time course of 140 days. This data set shows that expressing bacterial numbers per fresh sediment volume, per sediment dry mass, or per pore-water fluid volume, respectively, yield significantly different results and ecological conlusions. These findings refer particularly to intra-study and time-course comparisons as presented in our case. Bacterial cell numbers expressed per gram sediment dry mass revealed statistically significant differences between the beginning and the end of the study, whereas expressed per cm3 of fresh sediment or fluid volume of sediment pore water, no statistical difference could be detected. It is argued that these differences were caused by physical sediment compaction and mineralisation processes over the considered time-course. Such mechanisms may simulate biological activity if some basic sediment parameters are neglected and thus standardisation has to be done with caution for the particular situation being observed. [source] Profiling bacterial survival through a water treatment process and subsequent distribution systemJOURNAL OF APPLIED MICROBIOLOGY, Issue 1 2005D. Hoefel Abstract Aims:, To profile fractions of active bacteria and of bacteria culturable with routine heterotrophic plate count (HPC) methods through a typical water treatment process and subsequent distribution system. In doing so, investigate how water treatment affects both bacterial abundance and diversity, and reveal the identities of active bacteria not detected by traditional HPC culture. Methods and Results:, Profiling active fractions was performed by flow cytometric cell sorting of either membrane-intact (BacLightTM kit) or enzymatically active (carboxyfluorescein diacetate, CFDA) bacteria, followed by eubacterial 16S rDNA-directed PCR and denaturing gradient gel electrophoresis (DGGE). Water treatment significantly reduced active bacterial numbers detected by the BacLightTM kit and CFDA assay by 2·89 and 2·81 log respectively. Bacterial diversity was also reduced from >20 DGGE bands in the active fractions of reservoir water to only two bands in the active fractions of finished water. These two bands represented Stenotrophomonas maltophila, initially culturable by HPC, and a Burkholderia -related species. Both species maintained measurable traits of physiological activity in distribution system bulk water but were undetected by HPC. Conclusions:, Flow cytometric cell sorting with PCR-DGGE, to assess water treatment efficacy, identified active bacteria from a variety of major phylogenetic groups undetected by routine HPC. Following treatment S. maltophila and a Burkholderia -related species retained activity and entered distribution undetected by HPC. Significance and Impact of the Study:, Methods used here demonstrate how water treatment operators can better monitor water treatment plant efficacy and assess distribution system instability by the detection and identification of active bacteria recalcitrant to routine HPC culture. [source] Distribution of Actinobacillus actinomycetemcomitans, Porphyromonas gingivalis and Prevotella intermedia in an Australian populationJOURNAL OF CLINICAL PERIODONTOLOGY, Issue 12 2001S. M. Hamlet Abstract Background, aim: The present study describes (i) the natural distribution of the three putative periodontopathogens Porphyromonas gingivalis, Prevotella intermedia and Actinobacillus actinomycetemcomitans in an Australian population and (ii) the relationship between these organisms, pocket depths and supragingival plaque scores. Methods: Subgingival plaque was collected from the shallowest and deepest probing site in each sextant of the dentition. In total, 6030 subgingival plaque samples were collected from 504 subjects. An ELISA utilising pathogen-specific monoclonal antibodies was used to quantitate bacterial numbers. Results::A. actinomycetemcomitans was the most frequently detected organism (22.8% of subjects) followed by P. gingivalis and P. intermedia (14.7% and 9.5% of subjects respectively). The majority of infected subjects (83%) were colonised by a single species of organism. A. actinomycetemcomitans presence was over-represented in the youngest age group but under-represented in the older age groups. Conversely, P. gingivalis and P. intermedia presence was under-represented in the youngest age group but over-represented in the older age groups. Differing trends in the distribution of these bacteria were observed between subjects depending upon the site of the infection or whether a single or mixed infection was present; however, these differences did not reach significance. Bacterial presence was strongly associated with pocket depth for both A. actinomycetemcomitans and P. gingivalis. For A. actinomycetemcomitans, the odds of a site containing this bacterium decrease with deeper pockets. In contrast, for P. gingivalis the odds of a site being positive are almost six times greater for pockets >3 mm than for pockets 3 mm. These odds increase further to 15.3 for pockets deeper than 5 mm. The odds of a site being P. intermedia positive were marginally greater (1.16) for pockets deeper than 3 mm. Conclusions: This cross-sectional study in a volunteer Australian population, demonstrated recognised periodontal pathogens occur as part of the flora of the subgingival plaque. Prospective longitudinal studies are needed to examine the positive relationship between pocket depth and pathogen presence with periodontal disease initiation and/or progression. Zusammenfassung Hintergrund: Die vorliegende Studie beschreibt: 1.) die natürliche Verteilung der 3 vermutlichen Parodontalpathogene Porphyromonas gingivalis und Prevotella intermedia und Actinobacillus actinomycetemcomitans in einer Australischen Population und 2.) das Verhältnis zwischen diesen Organismen, der Taschentiefe und den supragingivalen Plaquewerten. Methoden: In jedem Sextanten des Gebisses wurde subgingivale Plaque von der flachsten und tiefsten Stelle entnommen. Insgesamt wurden 6030 subgingivalen Plaqueproben bei 504 Personen entnommen. Um die Anzahl der Bakterien zu quantifizieren wurde ein ELISA, welcher mit pathogen-spezifische monoklonale Antikörper arbeitet, verwendet. Ergebnisse:A. actinomycetemcomitans war der Keim, der am häufigsten nachgewiesen wurde (22.8% der Personen), gefolgt von P. gingivalis und P. intermedia (14.7% bzw. 9.5% der Personen). Die Mehrheit der Personen (83%) wurde von einer einzigen Spezies eines Organismus kolonisiert. Das Vorkommen von A. actinomycetemcomitans war in der jüngsten Altersgruppe überrepräsentiert, aber in der älteren Altersgruppen unterrepräsentiert. Im Gegensatz dazu war das Vorkommen von P. gingivalis und P. intermedia in der jüngsten Altersgruppe unterepräsentiert, aber in der älteren Altersgruppen überrepräsentiert. Zwischen der Personen wurden unterschiedliche Trends in der Verteilung dieser Bakterien beobachtet. Diese waren abhängig von der Stelle der Infektion oder ob eine Monoinfektion oder Mischinfektion vorhanden war. Jedoch erreichten diese Unterschiede nicht den Bereich der Signifikanz. Sowohl für A. actinomycetemcomitans als auch P. gingivalis war das Vorkommen von Bakterien stark mit der Taschentiefe assoziiert. Für A. actinomycetemcomitans nimmt die Odds einer Stelle welche das Bakterium enthält mit der Tiefe der Tasche ab. Im Gegensatz dazu ist die Odds einer Stelle die positiv für P. gingivalis ist fast sechsmal größer für Taschen >3 mm als für Taschen 3 mm. Diese Odds erhöht sich weiter auf 15.3 für Taschen die tiefer als 5 mm sind. Die Odds einer Stelle die positive für P. intermedia ist war nur etwas größer (1.16) für Taschen, die tiefer als 3 mm sind. Schlussfolgerung: Diese Querschnittsstudie einer Australischen Population von Freiwillingen zeigte, dass die erkannten Parodontalpathogene ein Bestandteil der Flora der subgingivalen Plaque sind. Prospektive Langzeitstudien sind notwendig, um die positive Beziehung zwischen der Taschentiefe und dem Vorkommen von Pathogenen mit dem Beginn und der Progression einer Parodontalerkrankung zu untersuchen. Résumé Origine: Cette étude décrit (i) la distribution naturelle des 3 parodontopathogènes présume,Actinobacillus actinomycetemcomitans, Porphyromonas gingivalis et Prevotella intermedia dans une population australienne et (ii) la relation entre ces organismes, les profondeurs de poche et les scores de plaque supragingivale. Méthodes: La plaque sous-gingivale a été prélevée sur le site le moins profond et sur le site le plus profond de chaque sextant de la denture. Au total, 6030 échantillons de plaque sous-gingivale ont été prélevés chez 504 sujets. Un test ELISA par anticorps monoclonaux spécifiques des pathogènes a permis de quantifier les nombres de bactéries. Résultats:Actinobacillus actinomycetemcomitans était l'organisme le plus fréquement détecté (22.8%) des sujets) suivi de Porphyromonas gingivalis et Prevotella intermedia (14.7% et 9.5% des sujets, respectivement). La majorité des sujets infectés (83%) étaient colonisés par une unique espèce d'organisme. La présence d'Actinobacillus actinomycetemcomitansétait surreprésentée dans le groupe des plus jeunes mais sous-représentée dans les groupes plus agés. Des tendances différentes de la distribution de ces bactéries étaient observées entre les sujets selon le site d'infection ou la présence d'une infection unique ou mixte. Cependant, ces différences n'étaient pas significatives. La présence bactérienne était fortement associée avec la profondeur de poche pour Actinobacillus actinomycetemcomitans et Porphyromonas gingivalis, pour Actinobacillus actinomycetemcomitans, les chances d'un site de contenir cette bactérie diminuant avec la profondeur de poche, alors que pour Porphyromonas gingivalis, les chances d'un site d'être positif étaient 6× plus grande pour des poches >3 mm que pour les poches 3 mm. Ces chances augmentaient en plus à 15.3 pour les poches >5 mm. Les chances d'un site d'être positif pour P. intermediaétaient légèrement plus importantes pour les poches de plus de 3 mm. Conclusions: Cette étude croisée dans une population volontaire australienne a démontré que des pathogènes parodontaux reconnus font partie de leur plaque sous-gingivale. Des études prospectives longitudinales sont nécessaires pour examiner les relations positives entre la profondeur de poche et la présence de pathogènes et l'initiation et/ou la progression de la maladie. [source] Relative Abundance and Species Composition of Gram-Negative, Aerobic Bacteria Associated with the Gut of Juvenile White Shrimp Litopenaeus vannamei Reared in Oligotrophic Well Water and Eutrophic Pond WaterJOURNAL OF THE WORLD AQUACULTURE SOCIETY, Issue 2 2000Shaun M. Moss Gut bacteria may contribute significantly to the growth and survival of cultured shrimp, although little is known about factors that affect bacterial community structure in shrimp guts. The objective of this study was to determine the abundance and species composition of gut bacteria in juvenile white shrimp Litopenaeus vannamei reared in two different environments. Eight 120-L tanks were stocked at a density of 8 shrimphank. Two treatments were tested for 10 d and consisted of tanks receiving flow-through water from one of two sources: 1) well water pumped from a sea-water aquifer (Well treatment), and 2) pond water pumped from an intensive shrimp pond (Pond treatment). Shrimp mid- and hindguts were excised on days 1, 3, 6, and 10 for enumeration of gram-negative, aerobic bacteria by quantifying colony-forming units (CFU) using standard microbiological plating techniques. Identification of bacterial isolates was made using the Biologa® GN Microplate system. Bacterial numbers were significantly greater (P > 0.05) in Well shrimp than in Pond shrimp on days 1 and 3. Following day 3, a decrease in bacterial numbers occurred in the Well shrimp, and no significant differences between treatments were observed on days 6 or 10. Guts from Well shrimp were dominated by Vibrio and Aero-monas, and these two genera accounted for 80,851 of the bacteria on each sampling day. Guts from Pond shrimp exhibited a greater bacterial diversity and were dominated by Vibrio, Aeromonas, and Pseudomonas. Flavobacterium were identified in the guts of Pond shrimp on days 3 and 10, but were not identified in any of the Well shrimp. A greater understanding of gut bacteria-shrimp interactions could lead to increased production and profitability for shrimp farmers through the development of more cost-effective feeds and novel disease control strategies. [source] Cooperative biodegradation of geosmin by a consortium comprising three gram-negative bacteria isolated from the biofilm of a sand filter columnLETTERS IN APPLIED MICROBIOLOGY, Issue 4 2006D. Hoefel Abstract Aims:, To isolate and identify bacteria from a sand filter column capable of degrading the taste and odour compound, geosmin. In doing so, to investigate if these organisms degrade geosmin either individually or if an alternative mechanism is utilized. Methods and Results:, Geosmin-degrading bacteria from a biologically active sand filter column were enriched by their growth in a minimal medium supplemented with geosmin as the sole carbon source. By day 51, 21·7 mg l,1 of geosmin had been degraded as determined by solid-phase microextraction gas chromatography/mass spectrometry, and was accompanied by a 2·12 log10 increase in active bacterial numbers as measured using the BacLightTM bacterial viability kit and flow cytometric enumeration. During the onset of geosmin degradation, the predominance of three bacteria, most similar to previously cultured species of Sphingopyxis alaskensis, Novosphingobium stygiae and Pseudomonas veronii based on 16S rRNA gene sequences was detected by denaturing gradient gel electrophoresis. Subsequent isolation of these organisms revealed that degradation of geosmin, when present as either the sole carbon source (ranging from 40 ng l,1 to 20 mg l,1) or when spiked into sterile reservoir water (37 and 131 ng l,1), occurred only when all three isolates were present. None of the isolates was shown to be capable of degrading geosmin either individually or in any combination of two. Conclusions:, This study has reported, for the first time, the cooperative degradation of geosmin by a consortium comprising three gram-negative bacteria isolated from a biologically active sand filter column. Significance and Impact of the Study:, These results are important for researchers currently employing molecular-based approaches to further understand the biodegradation of geosmin by bacteria, as such studies may be complicated by the discovery of geosmin degradation occurring by a consortium. This study also advances the knowledge surrounding the types of bacteria capable of degrading the taste and odour compound, as investigations to date regarding this are limited. [source] Fine mapping of the chicken salmonellosis resistance locus (SAL1)ANIMAL GENETICS, Issue 6 2009M. S. Fife Summary Salmonella enterica serovar Typhimurium is a Gram-negative bacterium that has a significant impact on both human and animal health. It is one of the most common food-borne pathogens responsible for a self-limiting gastroenteritis in humans and a similar disease in pigs, cattle and chickens. In contrast, intravenous challenge with S. Typhimurium provides a valuable model for systemic infection, often causing a typhoid-like infection, with bacterial replication resulting in the destruction of the spleen and liver of infected animals. Resistance to systemic salmonellosis in chickens is partly genetically determined, with bacterial numbers at systemic sites in resistant lines being up to 1000-fold fewer than in susceptible lines. Identification of genes contributing to disease resistance will enable genetic selection of resistant lines that will reduce Salmonella levels in poultry flocks. We previously identified a novel resistance locus on Chromosome 5, designated SAL1. Through the availability of high-density SNP panels in the chicken, combined with advanced back-crossing of the resistant and susceptible lines, we sought to refine the SAL1 locus and identify potential positional candidate genes. Using a 6th generation backcross mapping population, we have confirmed and refined the SAL1 locus as lying between 54.0 and 54.8 Mb on the long arm of Chromosome 5 (F = 8.72, P = 0.00475). This region spans 14 genes, including two very striking functional candidates; CD27-binding protein (Siva) and the RAC -alpha serine/threonine protein kinase homolog, AKT1 (protein kinase B, PKB). [source] | |||||||||||||