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BC
Kinds of BC Terms modified by BC Selected AbstractsThe role of cell death in sexually dimorphic muscle development: Male-specific muscles are retained in female bax/bak knockout miceDEVELOPMENTAL NEUROBIOLOGY, Issue 11 2008Dena A. Jacob Abstract The bulbocavernosus (BC) and levator ani (LA) muscles are present in males but absent or severely reduced in females, and the fate of these muscles controls the survival of motoneurons in the sexually dimorphic spinal nucleus of the bulbocavernosus. However, the mechanism underlying the sex difference in BC and LA development has been controversial. We examined the role of cell death in sexual differentiation of the bulbocavernosus BC/LA muscles in mice. Muscle development was mapped from embryonic day 16 (E16) to postnatal day 5 (P5). A sex difference (male > female) first arose on E17 (BC) or E18 (LA), and increased in magnitude postnatally. TUNEL labeling revealed dying cells in the BC and LA muscles of both sexes perinatally. However, females had a significantly higher density of TUNEL-positive cells than did males. A role for the proapoptotic factors, Bax and Bak, in BC/LA development was tested by examining mice lacking one or both of these proteins. In females lacking either Bax or Bak, the BC was absent and the LA rudimentary. Deletion of both bax and bak genes, however, rescued the BC, increased LA size ,20-fold relative to controls, and virtually eliminated TUNEL-positive cells in both muscles. We conclude that cell death plays an essential role in sexual differentiation of the BC/LA muscles. The presence of either Bax or Bak is sufficient for cell death in the BC/LA, whereas the absence of both prevents sexually dimorphic muscle cell death. © 2008 Wiley Periodicals, Inc. Develop Neurobiol, 2008. [source] Searching for schizophrenia in ancient Greek and Roman literature: a systematic reviewACTA PSYCHIATRICA SCANDINAVICA, Issue 5 2003K. Evans Objective:, The aim of this study was to systematically examine ancient Roman and Greek texts to identify descriptions of schizophrenia and related disorders. Method:, Material from Greek and Roman literature dating from the 5th Century BC to the beginning of the 2nd Century AD was systematically reviewed for symptoms of mental illness. DSM IV criteria were applied in order to identify material related to schizophrenia and related disorders. Results:, The general public had an awareness of psychotic disorders, because the symptoms were described in works of fiction and in historical accounts of malingering. There were isolated instances of text related to psychotic symptoms in the residents of ancient Rome and Greece, but no written material describing a condition that would meet modern diagnostic criteria for schizophrenia. Conclusion:, In contrast to many other psychiatric disorders that are represented in ancient Greek and Roman literature, there were no descriptions of individuals with schizophrenia in the material assessed in this review. [source] Climatic influence on the inter-annual variability of late-Holocene minerogenic sediment supply in a boreal forest catchmentEARTH SURFACE PROCESSES AND LANDFORMS, Issue 4 2010Gunilla Petterson Abstract Processes controlling sediment yield vary over a range of timescales, although most process-based observations are extremely short. Lake sediments, however, can be used to extend the observational timescale and are particularly useful when annually laminated (varved) sediment is present. The sediment record at Kassjön (N. Sweden) consists of ,6400 varves, each 0·5,1 mm thick. Image analysis was used to determine grey-scale variation and varve thickness from which annual minerogenic accumulation rate (MinAR) (mg cm,2 year,1) was inferred for the period 4486 BC , AD 1900. MinAR varies on annual to centennial scales and mainly reflects channel bank erosion by the inflow streams. The mineral input reflects the intensity of the spring run-off, which is dependent on the amount of snow accumulated during the winter, and hence MinAR is a long-term record of variability in past winter climate; other factors will be a variable response to catchment uplift, vegetation succession and pedogenesis. A major shift from low to high MinAR occurred ,250 BC, and peaks occurred around AD 250, 600, 1000, 1350 and 1650. Wavelet power spectrum analysis (confirmed by Fourier analyses) indicated significantly different periodicities throughout the period 4000 BC , AD 1700, including 275 years for the period 4000 BC , 2900 BC, 567 years for the period 2901 BC , 1201 BC, and 350 and 725 years for the period 1200 BC , AD 1700. The long-term, centennial scale variability (,350 years) may reflect solar forcing (cf the 385-year peak in tree-ring calibrated 14C activity) but interestingly, there is no obvious link to high frequency forcing, such as the North Atlantic Oscillation. The high resolution component of the record highlights the relevance of varved lake sediment records for understanding erosion dynamics in undisturbed forested catchments and their link to long-term climate dynamics and future climate change. Copyright © 2010 John Wiley & Sons, Ltd. [source] Characteristics of strawberry plants propagated by in vitro bioreactor culture and ex vitro propagation methodENGINEERING IN LIFE SCIENCES (ELECTRONIC), Issue 3 2009Samir C. Debnath Abstract Reproducible protocol for regeneration of complete plantlets from ,Bounty' strawberry (Fragaria ananassa Duch.), using a combination of gelled medium and bioreactor system, has been standardized. Sepals, leaf discs, and petiole halves produced multiple buds and shoots when cultured on semi solid-gelled medium containing 4 ,M thidiazuron (TDZ) for 4 wk followed by transferring in liquid medium containing 2,,M TDZ in a bioreactor system and cultured for another 4 wk. TDZ induced shoot proliferation at 0.1,,M in the bioreactor system but inhibited shoot elongation. TDZ-induced shoots were elongated and rooted in vitro on gelled medium containing 2,,M zeatin. Such bioreactor-derived tissue culture (BC) plantlets obtained from sepal explants were grown ex vitro and compared with those propagated by tissue culture on gelled medium (GC) and by conventional runner cuttings (RC), for growth, morphology, anthocyanin content, and antioxidant activity after three growth seasons. The BC and GC plants produced more crowns, runners, leaves, and berries than the RC plants although berry weight per plant did not differ significantly. BC and GC plants produced berries with more anthocyanin contents and antioxidant activities than those produced by the RC plants. However, intersimple sequence repeat (ISSR) marker assay produced a homogenous amplification profile in the tissue culture and donor control plants confirming the clonal fidelity of micropropagated plants. In vitro culture on TDZ and zeatin-containing nutrient media apparently induced the juvenile branching characteristics that favored enhanced vegetative growth with more crown, runners, leaf, and berry production. [source] Comparative in vitro and in vivo genotoxicities of 7H -benzo[c]fluorene, manufactured gas plant residue (MGP), and MGP fractionsENVIRONMENTAL AND MOLECULAR MUTAGENESIS, Issue 3 2004Leslie Cizmas Abstract Manufactured gas plant residue (MGP) is a complex mixture of polycyclic aromatic hydrocarbons (PAHs) that is tumorigenic in the lungs of mice. This study compared the relative genotoxicity of 7H -benzo[c]fluorene (BC), a PAH component of MGP, with MGP and MGP fractions in order to assess the contribution of BC to the genotoxicity of MGP. An MGP sample was separated into seven fractions (F1,F7) using silica gel column chromatography with petroleum ether (PE) followed by PE:acetone (99:1 v/v, then 98:2). PAHs were quantified using gas chromatography/mass spectrometry. An aliquot of F2, the fraction with the highest BC concentration and highest weighted mutagenic activity in Salmonella typhimurium strain TA98, was further separated using silica gel thin-layer chromatography with hexane. The first F2 subfraction, sF2-a, was enriched in BC and coeluting compounds and contained 35,000 ppm BC and 216,109 ppm carcinogenic PAHs (cPAHs, the sum of seven PAHs categorized by the U.S. EPA as class B2 carcinogens). The second F2 subfraction, sF2-b, contained a ninefold lower concentration of BC, with 3,900 ppm BC and 45,216 ppm cPAHs. Female ICR mice received topical application of crude MGP, crude MGP spiked with analytical-grade BC, F2, sF2-a, sF2-b, or analytical-grade BC. DNA adduct levels were analyzed by nuclease P1-enhanced 32P-postlabeling. In lung DNA of mice receiving 0.48 or 3.0 mg/mouse, net total RAL × 109 values were F2, 30.8 and 87.2; sF2-a, 24.8 and 106.7; and sF2-b, 19.6 and 151.0, respectively. Mice dosed with 0.10 mg analytical-grade BC (the mass of BC in 3.0 mg sF2-a) exhibited a net total RAL × 109 value of 7.03 in lung DNA. This was equal to approximately 7% of the total RAL × 109 value produced by 3.0 mg sF2-a. Thus, although BC appears to make an appreciable contribution to pulmonary adduct formation, the results suggest that MGP components other than BC play an important role in lung DNA adduct formation following topical MGP administration. Environ. Mol. Mutagen. 43:159,168, 2004. © 2004 Wiley-Liss, Inc. [source] Adsorption of hydrophobic organic compounds onto a hydrophobic carbonaceous geosorbent in the presence of surfactants,ENVIRONMENTAL TOXICOLOGY & CHEMISTRY, Issue 6 2008Peng Wang Abstract The adsorption of hydrophobic organic compounds (HOCs; atrazine and diuron) onto lampblack was studied in the presence of nonionic, cationic, and anionic surfactants (Triton® X-100), benzalkonium chloride [BC], and linear alkylbenzene sulfonate [LAS]) to determine the effect of the surfactant on HOC adsorption onto a hydrophobic carbonaceous geosorbent. Linear alkylbenzene sulfonate showed an adsorption capacity higher than that of BC but similar to that of Triton X-100, implying the charge property of a surfactant is not a useful indicator for predicting the surfactant's adsorption onto a hydrophobic medium. The results also indicated that the octanol-water partition coefficient (Kow) of a surfactant is not a good predictor of that surfactant's sorption onto a hydrophobic medium. Under subsaturation adsorption conditions (i.e., before sorption saturation is reached), surfactant adsorption reduced HOC adsorption to a significant extent, with the reduction in HOC adsorption increasing monotonically with the amount of surfactant adsorbed. Among the three surfactants, Triton X-100 was the most effective in reducing HOC adsorption, whereas BC and LAS showed similar effectiveness in this regard. Under the same amount of the surfactant sorbed, the reduction in atrazine adsorption was consistently greater than that for diuron because of atrazine's lower hydrophobicity. No significant difference was observed in the amount of the HOC adsorbed under different adsorption sequences. Our results showed that the presence of surfactant can significantly decrease HOC adsorption onto hydrophobic environmental media and, thus, is important in predicting HOC fate and transport in the environment. [source] Complete elimination of carbonates: A critical step in the accurate measurement of organic and black carbon in sedimentsENVIRONMENTAL TOXICOLOGY & CHEMISTRY, Issue 9 2005Marta T. Lukasewycz Abstract Accurate measurement of organic carbon (OC) and black carbon (BC) in sediments requires the complete removal of coexisting inorganic carbonates from the sample before instrumental analysis. The removal of carbonates from sediments is achieved with acidification, which causes the dissolution and decomposition of carbonates with accompanying effervescence. This effervescence, or the lack of it, is commonly used as an indicator for the presence or absence of carbonates. We have found that the lack of effervescence endpoint used with the direct acidification method (adding aliquots of acid to samples) is not a reliable indicator for complete removal of carbonates from sediment samples. The ineffectiveness of the lack of effervescence endpoint, we believe, is caused by the presence of carbonates with dissolution rates much slower than those of calcite, resulting in much slower rates of visible effervescence. We propose and demonstrate a method for determining the amount of acid required for complete elimination of all carbonates using Lake Michigan (USA) sediment samples. Based on our experiences with the lack of effervescence endpoint, we recommend that in any scheme for analysis of OC and/or BC, a minimum of two samples be treated with three different levels of acidification, with the lowest level being the same as that planned for all the OC and/or BC analyses. There can be no significant differences among the OC and BC contents measured using the three different levels of acidification. [source] Prediction of large variation in biota to sediment accumulation factors due to concentration-dependent black carbon adsorption of planar hydrophobic organic compoundsENVIRONMENTAL TOXICOLOGY & CHEMISTRY, Issue 3 2005Gerard Cornelissen Abstract Biota-to-sediment accumulation factors (BSAFs) sometimes show large variations between sites for a given planar hydrophobic organic compound (pHOC) in a given organism. We present a framework in which strong adsorption to soot/charcoal (black carbon [BC]) explains such BSAF variations. Recently constrained parameters on environmental BC sorption were used in a dual-mode sorption model of BSAF. Variations in sedimentary BC content are shown to explain variations in BSAF of one to two orders of magnitude. In addition, strong BC sorption can explain the often-observed difference in BSAF between polycyclic aromatic hydrocarbons (PAHs) and polychlorinated biphenyls (PCBs). The strong nonlinearity of BC sorption can render BSAF values strongly concentration-dependent for a given sediment/organism/compound combination, so it is of paramount importance to carry out uptake and toxicity tests at the relevant environmental concentrations. [source] Evaluation of the role of black carbon in attenuating bioaccumulation of polycyclic aromatic hydrocarbons from field-contaminated sediments,ENVIRONMENTAL TOXICOLOGY & CHEMISTRY, Issue 11 2004Brita Sundelin Abstract The significance of black carbon (BC) for the bioavailability of polycyclic aromatic hydrocarbons (PAHs) was examined by using historically contaminated intact sediment cores in laboratory exposure experiments with the deposit-feeding amphipod Monoporeia affinis. Log values of amphipod biota,sediment accumulation factors (BSAFs) were significantly related to log BC, whereas log BSAFs were related to log octanol,water partition coefficients only in background sediments containing less BC. In the background sediments, the BSAF for polycyclic aromatic hydrocarbons (PAHs) was 1 to 2 for phenanthrene, with lower values for more hydrophobic PAHs, indicating an increase in nonequilibrium conditions with increasing PAH molecular size. For the near-equilibrated phenanthrene and fluoranthene, higher BSAFs were measured during exposure to background sediments, with BSAF decreasing to <0.1 in contaminated sediments in the Stockholm waterways. In situ caged mussels (Dreissena polymorpha) exhibited field BSAF values (relative to sediment-trap,collected suspended matter) for polychlorinated biphenyls (PCBs) of 0.1 to 0.4, but for PAHs of similar hydrophobicity and molecular size, the field BSAFs were much lower and in the range 0.002 to 0.05. This PAH,PCB dichotomy is consistent with recently reported much stronger binding to diesel soot (a form of BC) for PAHs than for PCBs of equal hydrophobicities. Lower BSAFs for the near-equilibrated PAHs (phenanthrene and fluoranthene) in the urban sediments relative to the background sediments were consistent with the larger presence of BC in the urban sediments. This study provides the first linked BSAF,BC field data that supports a causal relationship between strong soot sorption and reduced bioavailability for PAHs. [source] Harbor seals (Phoca vitulina) in British Columbia, Canada, and Washington State, USA, reveal a combination of local and global polychlorinated biphenyl, dioxin, and furan signalsENVIRONMENTAL TOXICOLOGY & CHEMISTRY, Issue 1 2004Peter S. Ross Abstract The harbor seal (Phoca vitulina) can serve as a useful indicator of food web contamination by persistent organic pollutants (POPs) because of its high trophic level, wide distribution in temperate coastal waters of the Northern Hemisphere, and relative ease of capture. In 1996 through 1997, we live-captured 60 harbor seal pups from three regions, spanning remote (Queen Charlotte Strait, BC, Canada), moderately industrialized (Strait of Georgia, BC, Canada), and heavily industrialized (Puget Sound, WA, USA) marine basins straddling the Canada-United States border. Biopsy samples of blubber were taken and analyzed for congener-specific polychlorinated biphenyls (PCBs), polychlorinated dibenzo- p -dioxins (PCDDs), and polychlorinated dibenzofurans (PCDFs) by using high-resolution gas chromatography-high-resolution mass spectrometry. Harbor seals in Puget Sound were heavily contaminated with PCBs, whereas seals from the Strait of Georgia had relatively high concentrations of PCDDs and PCDFs. Pattern evaluation and principal components analysis suggested that proximity to sources influenced the mixture to which seals were exposed, with those inhabiting more remote areas being exposed to lighter PCB congeners (those with lower Henry's law constant and KOW) that disperse more readily through atmospheric and other processes. Total toxic equivalents to 2,3,7,8-tetrachlorodibenzo- p -dioxin for the PCBs, PCDDs, and PCDFs suggest that Puget Sound seals are at greatest risk for adverse health effects, and that PCBs represent the class of dioxinlike contaminants of greatest concern at all sites. [source] History of the ketogenic dietEPILEPSIA, Issue 2008James W. Wheless Summary Fasting and other dietary regimens have been used to treat epilepsy since at least 500 BC. To mimic the metabolism of fasting, the ketogenic diet (KD) was introduced by modern physicians as a treatment for epilepsy in the 1920s. For two decades this therapy was widely used, but with the modern era of antiepileptic drug treatment its use declined dramatically. By the end of the twentieth century this therapy was available in only a small number of children's hospitals. Over the past 15 years, there has been an explosion in the use, and scientific interest in the KD. This review traces the history of one of the most effective treatments for childhood epilepsy. [source] Psychoses of epilepsy in Babylon: The oldest account of the disorderEPILEPSIA, Issue 9 2008Edward H. Reynolds Summary We have previously published translations of Babylonian texts on epilepsy and stroke, which we believe to be the oldest detailed accounts of these neurological disorders from the second millennium BC. We now present a short Babylonian text, which clearly describes what are today known as interictal or schizophrenia-like psychoses of epilepsy. The text includes many of the classical symptoms of the syndrome, for example, paranoid delusions, hallucinations and mood disorders, as well as religiosity and hyposexuality, which have only been crystallized in the twentieth century. The Babylonians were remarkably good observers of human disease and behavior but had little or no understanding of pathology or brain function. Although they recognized many natural causes of disease, epilepsy and behavior disorders were attributed to supernatural, usually evil forces, the forerunner of the Greek concept of the Sacred Disease. [source] Localizing and Lateralizing Value of Behavioral Change in Childhood Partial SeizuresEPILEPSIA, Issue 1 2007András Fogarasi Summary:,Objective: To describe clinical characteristics as well as localizing and lateralizing value of behavioral change (BC) at the onset of childhood seizures. Methods: Five hundred forty-one videotaped seizures of 109 consecutive patients ,12 years with partial epilepsy and postoperatively seizure-free outcome were analyzed. Behavioral change (the first clinical feature of a certain seizure with a sudden change in the child's behavior) was evaluated by two independent investigators. Results: Thirty-three (30%) patients showed BC at least once during their seizures. Behavioral changes appeared in arrestive form in 19 and with affective activities in 18 children; four patients produced both kinds of BCs, separately. Arrest-type BC happened in 16 of 50 children with right- and 3 of 59 patients with left-sided seizure onset zone (p < 0.001). Affective-type BC was observed in 17 of 67 temporal lobe epilepsy patients while it happened in only 1 of 42 children with extratemporal lobe epilepsy (p = 0.001). Conclusions: Arrest-type BC lateralizes to the right hemisphere, while affective-type BC localizes to the temporal lobe in childhood partial seizures. Type of BCs can add important information to the presurgical evaluation of young children with refractory partial epilepsy. [source] Oral vitamin E supplementation on oxidative stress, vitamin and antioxidant status in intensely exercised horsesEQUINE VETERINARY JOURNAL, Issue S36 2006C. A. WILLIAMS Summary Reasons for performing study: Vitamin E is the most commonly supplemented antioxidant in horses; however, previous research is not conclusive as to the recommended level for exercising horses. Objective: To evaluate the effects of 3 levels of vitamin E supplementation on oxidative stress and vitamin/antioxidant status in intensely exercised horses to determine the optimal level of vitamin E supplementation. Methods: Twelve unfit Standardbreds were divided into 3 groups, supplemented orally with 0 (CON), 5000 (MOD), or 10,000 (HI) iu/day of DL-,-tocopheryl acetate. The 3 times 3 Latin square design consisted of three 4 week supplementation periods with 4 week wash out periods between. After each period, horses underwent a treadmill interval exercise test. Blood samples were collected and heart rate (HR) measured before, during and after exercise. Data were analysed using ANOVA with repeated measures in SAS. Results: The CON group had lower HR throughout the test compared to the MOD and HI groups (P<0.05). There was an increase in plasma retinol (RET), ,-carotene (BC), red blood cell total glutathione and glutathione peroxidase with exercise (P<0.05), but all groups returned to baseline after 24 h. Plasma ,-tocopherol (TOC) increased from baseline with exercise (P<0.0001) in all groups; treatment differences were observed at 24 h (P<0.05). The HI and CON groups had lower BC compared to the MOD group (P = 0.05). Conclusions: Horses supplemented with vitamin E, at nearly 10-times the 1989 NRC recommended level, did not experience lower oxidative stress compared to control horses. Additionally, lower plasma BC levels observed in the HI group, which may indicate that vitamin E has an inhibitory effect on BC metabolism. Potential relevance: Supplementation above control levels is not more beneficial to oxidative stress and antioxidant status in intensely exercising horses; indeed, levels 10 times in excess may be detrimental to BC and should be avoided. [source] Perirhinal cortex resolves feature ambiguity in complex visual discriminationsEUROPEAN JOURNAL OF NEUROSCIENCE, Issue 2 2002Timothy J. Bussey Abstract The present experiment tested predictions of a ,perceptual,mnemonic/feature conjunction' (PMFC) model of perirhinal cortex function. The model predicts that lesions of perirhinal cortex should disrupt complex visual discriminations with a high degree of ,feature ambiguity', a property of visual discrimination problems that can emerge when features of an object are rewarded when they are part of one object, but not when part of another. As feature ambiguity is thought to be the critical factor, such effects should be independent of the number of objects to be discriminated. This was tested directly, by assessing performance of control monkeys and monkeys with aspiration lesions of perirhinal cortex on a series of concurrent discriminations in which the number of object pairs was held constant, but the degree of feature ambiguity was varied systematically. Monkeys were tested in three conditions: Maximum Feature Ambiguity, in which all features were explicitly ambiguous (AB+, CD+, BC,, AD,; the biconditional problem); Minimum Feature Ambiguity, in which no features were explicitly ambiguous (AB+, CD+, EF,, GH,); and Intermediate Feature Ambiguity, in which half the features were explicitly ambiguous (AB+, CD+, CE,, AF,). The pattern of results closely matched that predicted by simulations using a connectionist network: monkeys with perirhinal cortex lesions were unimpaired in the Minimum Feature Ambiguity condition, mildly impaired in the Intermediate Feature Ambiguity condition and severely impaired in the Maximum Feature Ambiguity condition. These results confirm the predictions of the PMFC model, and force a reconsideration of prevailing views regarding perirhinal cortex function. [source] Micromorphological evidence of black carbon in colluvial soils from NW SpainEUROPEAN JOURNAL OF SOIL SCIENCE, Issue 6 2008J. Kaal Summary Biomass burning produces a residue called black carbon (BC). Black C is generally considered to be highly resistant against biodegradation and has a potential role in the global C cycle, but is difficult to identify and quantify when subjected to prolonged degradation in terrestrial sediments. The colluvial soils from Campo Lameiro (NW Spain), also known as ,Atlantic rankers', are rich in organic matter (up to 140 g C kg,1 soil). A micromorphological study was undertaken to test the hypothesis that a large proportion of the organic matter was derived from BC formed during Holocene wildfires (up to > 6000 years ago). As roughly estimated from image analysis of 12 thin sections, the volumetric BC contribution ranged between 10 and 60% (26% on average) of the organic matter. This is a conservative estimate as additional morphologically unrecognizable BC was present in the microgranular matrix of coalesced excrement. We conclude that (i) currently unknown quantities of BC are stored in Atlantic rankers and (ii) analysis of thin sections is an effective tool to identify BC. [source] Determination of refractory organic matter in marine sediments by chemical oxidation, analytical pyrolysis and solid-state 13C nuclear magnetic resonance spectroscopyEUROPEAN JOURNAL OF SOIL SCIENCE, Issue 3 2008J. M. De La Rosa Summary Seeking to quantify the amount of refractory organic matter (ROM), which includes black carbon-like material (BC), in marine sediments, we have applied a two-step procedure that consists of a chemical oxidation with sodium chlorite of the demineralized sediments followed by integration of the aromatic C region in the remaining residues by solid-state 13C nuclear magnetic resonance (NMR) spectroscopy. The efficacy for lignin removal was tested by analytical pyrolysis in the presence of tetramethyl ammonium hydroxide (TMAH). Riverine, estuarine and offshore marine sediment samples were collected from the southwest Atlantic coast of Spain, a site of geological and environmental interest. Measured contents of BC-like material ranged between 3.0 and 45.7% of the total organic carbon. Greater relative BC contents were found in riverine sediments close to urban areas, which show an elevated input of anthropogenic organic material. The contents of BC-like material in offshore marine sediments (5.5,6.1%) were similar to those previously reported for these kinds of samples. However, NMR and pyrolysis-GC/MS of the isolated ROM reveals that abundant refractory aliphatic organic material remains in most of the marine samples after chlorite oxidation. We suggest that this pool of aliphatic carbon may play an important role as a stable carbon pool within the global C cycle. [source] Aggregate-occluded black carbon in soilEUROPEAN JOURNAL OF SOIL SCIENCE, Issue 4 2006S. Brodowski Summary The great stability of black carbon (BC) in soils may not be solely attributable to its refractory structure but also to poor accessibility when physically enveloped by soil particles. Our aim was to elucidate the intensity of physical entrapment of BC within soil aggregates. For this purpose, the A horizon of a forest, and of a grassland soil, and of three soils under tillage, were sampled at the experimental station Rotthalmünster, Germany. Black carbon was assessed in water-stable aggregates and aggregate-density fractions using benzene polycarboxylic acids as specific markers. The greatest BC concentrations made up 7.2% of organic carbon and were found in the < 53 ,m fraction. The smallest BC concentrations occurred in the large macroaggregate fractions (> 2 mm). This pattern has been sustained even after tillage. The C-normalized BC concentrations were significantly greater (P < 0.05) in the occluded particulate organic matter (OPOM) fractions than in the free particulate organic matter (FPOM) and the mineral fractions. This enrichment of BC compared with organic carbon in the OPOM fractions amounted to factors of 1.5,2.7. Hence, BC was embedded within microaggregates in preference to other organic carbon compounds. Only 2.5,3.5% of BC was located in the OPOM fraction < 1.6 g cm,3, but 22,24% in the OPOM fraction with a density of 1.6,2.0 g cm,3. This suggests that BC possibly acted as a binding agent or was selectively enriched during decomposition of protected SOM, or both. Physical inclusion, particularly within microaggregates, could therefore contribute to the long mean-residence times of soil-inherent BC. [source] Distribution of microbial biomass and phospholipid fatty acids in Podzol profiles under coniferous forestEUROPEAN JOURNAL OF SOIL SCIENCE, Issue 4 2000H. Fritze Summary Microbial-derived phospholipid fatty acids (PLFAs) can be used to characterize the microbial communities in soil without the need to isolate individual fungi and bacteria. They have been used to assess microbial communities of humus layers under coniferous forest, but nothing is known of their distribution in the deeper soil. To investigate the vertical distribution we sampled nine Podzol profiles on a 100-m-long transect in a coniferous forest and analysed for their microbial biomass and PLFA pattern to a depth of 0.4 m. The transect covered a fertility gradient from Vaccinium vitis-idaea forest site type to Vaccinium myrtillus forest site type. The cores were divided into humus (O) and eluvial (E) layers and below that into 10-cm sections and designated as either illuvial (B) or parent material (C), or as a combination (BC). Two measures of microbial biomass analyses were applied: substrate-induced respiration (SIR) to determine microbial biomass C (Cmic), and the sum of the extracted microbial-derived phospholipid fatty acids (totPLFA). The soil fertility had no effect on the results. The Cmic correlated well with totPLFA (r=,0.86). The microbial biomass decreased with increasing depth. In addition the PLFA pattern changed with increased depth as assessed with principal component analysis, indicating a change in the microbial community structure. The composition of the PLFAs in the O layer differed from that in the E layer and both differed from the upper part of the B layer and from the rest of the BC layers. The deeper parts of the B layer (BC1, BC2 and BC3) were similar to one other. The O layer had more 18:2,6, a PLFA indicator of fungi, whereas the E layer contained relatively more of the PLFAs 16:1,9, 18:1,7 and cy19:0 common in gram-negative bacteria. With increased depth the relative amount of 10Me18:0, the PLFA indicator for actinomycetes, increased. We conclude that the PLFA method is a promising discriminator between the microbial community structures of the horizons in Podzols. [source] The transcarboxylase domain of pyruvate carboxylase is essential for assembly of the peroxisomal flavoenzyme alcohol oxidaseFEMS YEAST RESEARCH, Issue 7 2007Paulina Z. Ozimek Abstract Pyruvate carboxylase (Pyc1p) has multiple functions in methylotrophic yeast species. Besides its function as an enzyme, Pyc1p is required for assembly of peroxisomal alcohol oxidase (AO). Hence, Pyc1p-deficient cells share aspartate auxotrophy (Asp,) with a defect in growth on methanol as sole carbon source (Mut,). To identify regions in Hansenula polymorpha Pyc1p that are required for the function of HpPyc1p in AO assembly, a series of random mutations was generated in the HpPYC1 gene by transposon mutagenesis. Upon introduction of 18 mutant genes into the H. polymorpha PYC1 deletion strain (pyc1), four different phenotypes were obtained, namely Asp, Mut,, Asp, Mut+, Asp+ Mut,, and Asp+ Mut+. One mutant showed an Asp+ Mut, phenotype. This mutant produced HpPyc1p containing a pentapeptide insertion in the region that links the conserved N-terminal biotin carboxylation domain (BC) with the central transcarboxylation (TC) domain. Three mutants that were Asp, Mut, contained insertions in the TC domain, suggesting that this domain is important for both functions of Pyc1p. Analysis of a series of constructed C-terminal and N-terminal truncated versions of HpPyc1p showed that the TC domain of Pyc1p, including the region linking this domain to the BC domain, is essential for AO assembly. [source] Biotemplated Synthesis of Gold Nanoparticle,Bacteria Cellulose Nanofiber Nanocomposites and Their Application in BiosensingADVANCED FUNCTIONAL MATERIALS, Issue 7 2010Taiji Zhang Abstract Bacteria cellulose (BC) nanofibers are used as robust biotemplates for the facile fabrication of novel gold nanoparticle (NP),bacteria cellulose nanofiber (Au,BC) nanocomposites via a one-step method. The BC nanofibers are uniformly coated with Au NPs in aqueous suspension using poly(ethyleneimine) (PEI) as the reducing and linking agent. With the addition of different halides, Au,BC nanocomposites with different Au shell thicknesses are formed, and a possible formation mechanism is proposed by taking into account the special role played by PEI. A novel H2O2 biosensor is constructed using the obtained Au,BC nanocomposites as excellent support for horseradish peroxidase (HRP) immobilization, which allows the detection of H2O2 with a detection limit lower than 1,µM. The Au,BC nanocomposites could be further used for the immobilization of many other enzymes, and thus, may find potential applications in bioelectroanalysis and bioelectrocatalysis. [source] The relationship between the skipjack tuna (Katsuwonus pelamis) fishery and seasonal temperature variability in the south-western AtlanticFISHERIES OCEANOGRAPHY, Issue 1 2003H. A. Andrade Abstract The spatio-temporal distribution of tuna fishing effort has been related to oceanographic circulation and features in several seas of the world. Understanding the relationship between environmental variables and fishery resource dynamics is important for management decisions and to improve fishery yields. The relationship between sea temperature variability and the pole-and-line skipjack tuna (Katsuwonus pelamis) fishery in the south-western Atlantic Ocean was investigated in this work. Data from logbooks, satellite images (sea surface temperature), and oceanographic surveys were used in the analyses. Skipjack are caught in warm tropical waters of the Brazil Current (BC). The north,south displacement of fishing effort was strongly associated to seasonal variation of the surface temperature, which was coupled to the tropical BC flow. Oceanographic fronts from autumn to spring and a shallow thermocline in summer probably induces the aggregation of skipjack schools over the shelfbreak, favouring fishing operations. Hypotheses are proposed to explain the relationship between peaks of fishing events and the presence of topographic peculiarities of the shelfbreak. [source] Temporal and spatial responses of British Columbia steelhead (Oncorhynchus mykiss) populations to ocean climate shiftsFISHERIES OCEANOGRAPHY, Issue 1 2000Welch The pattern of temporal change in recruitment of steelhead trout (Oncorhynchus mykiss) entering the ocean between 1963 and 1990 was geographically coherent in all regions of British Columbia. A major increase in recruitment was evident for smolts entering the ocean after 1977. Subsequently, an out-of-phase response occurred after 1990, indicating that the effect of a possible 1990 regime shift had both temporal and geographical structure. Steelhead entering northern regions had increasing recruitment, while steelhead entering southern BC coastal regions had sharply decreasing recruitment. The evidence clearly indicates that the overall recruitment response since 1977 was primarily shaped by changes in marine (not freshwater) survival. Similar sudden changes in adult recruitment also appear to be occurring for other species of Pacific salmon in BC and Oregon, such as coho (O. kisutch), which appear to occur suddenly and show considerable persistence. A possible explanation for the change is that ocean productivity declined in coastal regions of southern BC after 1990, reducing the marine growth of juvenile salmon. The Bakun upwelling index shows a pattern of geographical coherence along the west coast of North America that could in principle explain the observed pattern of changes in recruitment. However, no evidence for a temporal shift in this index occurring around 1977 and 1990 is apparent. The reason for the sudden and persistent decline in ocean survival is therefore uncertain. [source] Interactions between genetic and reproductive factors in breast cancer risk in a population-based sample of African-American familiesGENETIC EPIDEMIOLOGY, Issue 4 2002Valérie Chaudru Abstract Incidence of breast cancer (BC) varies among ethnic groups, with higher rates in white than in African-American women. Until now, most epidemiological and genetic studies have been carried out in white women. To investigate whether interactions between genetic and reproductive risk factors may explain part of the ethnic disparity in BC incidence, a genetic epidemiology study was conducted, between 1989 and 1994, at the Howard University Cancer Center (Washington, DC), which led to the recruitment of 245 African-American families. Segregation analysis of BC was performed by use of the class D regressive logistic model that allows for censored data to account for a variable age of onset of disease, as implemented in the REGRESS program. Segregation analysis of BC was consistent with a putative dominant gene effect (P < 0.000001) and residual sister-dependence (P < 0.0001). This putative gene was found to interact significantly with age at menarche (P = 0.048), and an interaction with a history of spontaneous abortions was suggested (P = 0.08). A late age at menarche increased BC risk in gene carriers but had a protective effect in non-gene carriers. A history of spontaneous abortions had a protective effect in gene carriers and increased BC risk in non-gene carriers. Our findings agree partially with a similar analysis of French families showing a significant gene × parity interaction and a suggestive gene × age at menarche interaction. Investigating gene × risk factor interactions in different populations may have important implications for further biological investigations and for BC risk assessment. Genet. Epidemiol. 22:285,297, 2002. © 2002 Wiley-Liss, Inc. [source] Territorial Behaviour and Communication in a Ritual LandscapeGEOGRAFISKA ANNALER SERIES B: HUMAN GEOGRAPHY, Issue 2 2001Leif Sahlqvist Landscape research in the last decade, in human geography as well as in anthropology and archaeology, has often been polarized, either according to traditional geographical methods or following the principles of a new, symbolically orientated discipline. This cross,disciplinary study in prehistoric Östergötland, Sweden, demonstrates the importance of using methods and approaches from both orientations in order to gain reasonable comprehension of landscape history and territorial structure. Funeral monuments as cognitive nodes in a prehistoric cultural landscape are demonstrated as to contain significant elements of astronomy, not unlike what has been discussed for native and prehistoric American cultures, e.g. Ancestral Pueblo. A locational analysis with measurements of distances and directions was essential in approaching this structure. A nearest neighbour method was used as a starting,point for a territorial discussion, indicating that the North European hundreds division could have its roots in Bronze Age (1700,500 BC) tribal territories, linked to barrows geographically interrelated in cardinal alignments. In the European Bronze Age faith and science, the religious and the profane, were integrated within the framework of a solar cult, probably closely connected with astronomy in a ritual landscape, organized according to cosmological ideas, associated with power and territoriality. Cosmographic expression of a similar kind was apparently used even earlier, as gallery,graves (stone cists) from the Late Neolithic (2300,1700 BC) in Östergötland are also geographically interrelated in cardinal alignments. [source] Area-to-Point Prediction Under Boundary ConditionsGEOGRAPHICAL ANALYSIS, Issue 4 2008E. -H. This article proposes a geostatistical solution for area-to-point spatial prediction (downscaling) taking into account boundary effects. Such effects are often poorly considered in downscaling, even though they often have significant impact on the results. The geostatistical approach proposed in this article considers two types of boundary conditions (BC), that is, a Dirichlet-type condition and a Neumann-type condition, while satisfying several critical issues in downscaling: the coherence of predictions, the explicit consideration of support differences, and the assessment of uncertainty regarding the point predictions. An updating algorithm is used to reduce the computational cost of area-to-point prediction under a given BC. In a case study, area-to-point prediction under a Dirichlet-type BC and a Neumann-type BC is illustrated using simulated data, and the resulting predictions and error variances are compared with those obtained without considering such conditions. [source] History of Deforestation and Reforestation in the Dinaric KarstGEOGRAPHICAL RESEARCH, Issue 1 2009ANDREJ KRANJC Abstract The term karst derives from the Kras plateau, which is in the northwestern part of the area now known as the Dinaric Karst. The landscape consists mostly of Mesozoic carbonate rocks and stretches along the Adriatic Sea coast for a distance of 600 km. Although the region lies parallel to the sea, the Mediterranean temperature influence is limited to a narrow coastal belt, except for the amount of precipitation, which can reach 5000 mm yr,1. Forests belonging to the Mediterranean and Euro-Siberian , North American region, covered the primary Dinaric Karst. Human deforestation of the Karst began during the Neolithic period, 6500,6000 BC. Throughout history there have been two main reasons for deforestation; economic (the requirements of new land, pastures, timber use and trade), and social (local increases in population, mass migration, wars, raids). Mankind's perception of forest protection and preservation can be traced through documents going back to the 12th century. Reforestation is mentioned in some of them, but successful reforestation did not begin until the 1850s. Nowadays dense natural forests, extensive forest plantations, dry karst shrublands and also completely barren karst areas can all be found on the Dinaric Karst. [source] Storage and mobility of black carbon in permafrost soils of the forest tundra ecotone in Northern SiberiaGLOBAL CHANGE BIOLOGY, Issue 6 2008GEORG GUGGENBERGER Abstract Boreal permafrost soils store large amounts of organic carbon (OC). Parts of this carbon (C) might be black carbon (BC) generated during vegetation fires. Rising temperature and permafrost degradation is expected to have different consequences for OC and BC, because BC is considered to be a refractory subfraction of soil organic matter. To get some insight into stocks, variability, and characteristics of BC in permafrost soils, we estimated the benzene polycarboxylic acid (BPCA) method-specific composition and storage of BC, i.e. BPCA-BC, in a 0.44 km2 -sized catchment at the forest tundra ecotone in northern Siberia. Furthermore, we assessed the BPCA-BC export with the stream draining the catchment. The catchment is composed of various landscape units with south-southwest (SSW) exposed mineral soils characterized by thick active layer or lacking permafrost, north-northeast (NNE) faced mineral soils with thin active layer, and permafrost-affected raised bogs in plateau positions showing in part thermokarst formation. There were indications of vegetation fires at all landscape units. BC was ubiquitous in the catchment soils and BPCA-BC amounted to 0.6,3.0% of OC. This corresponded to a BC storage of 22,3440 g m,2. The relative contribution of BPCA-BC to OC, as well as the absolute stocks of BPCA-BC were largest in the intact bogs with a shallow active layer followed by mineral soils of the NNE aspects. In both landscape units, a large proportion of BPCA-BC was stored within the permafrost. In contrast, mineral soils with thick active layer or lacking permafrost and organic soils subjected to thermokarst formation stored less BPCA-BC. Permafrost is, hence, not only a crucial factor in the storage of OC but also of BC. In the stream water BPCA-BC amounted on an average to 3.9% of OC, and a yearly export of 0.10 g BPCA-BC m,2 was calculated, most of it occurring during the period of snow melt with dominance of surface flow. This suggests that BC mobility in dissolved and colloidal phase is an important pathway of BC export from the catchment. Such a transport mechanism may explain the high BC concentrations found in sediments of the Arctic Ocean. [source] Use of response functions in selecting lodgepole pine populations for future climatesGLOBAL CHANGE BIOLOGY, Issue 12 2006T. WANG Abstract Although growth response functions have previously been developed for lodgepole pine (Pinus contorta Dougl. ex Loud.) populations in British Columbia, new analyses were conducted: (1) to demonstrate the merit of a new local climate model in genecological analysis; (2) to highlight new methods for deriving response functions; and (3) to evaluate the impacts of management options for existing geographically defined seed planning units (SPUs) for reforestation. Results of this study suggest that new methods for anchoring population response functions, and a multivariate approach for incorporating climate variables into a single model, considerably improve the reliability of these functions. These functions identified a small number of populations in central areas of the species distribution with greater growth potential over a wide range of mean annual temperature (MAT). Average productivity of lodgepole pine is predicted to increase (up to 7%) if moderate warming (,2°C MAT) occurs in the next few decades as predicted, although productivity would substantially decline in some SPUs in southern BC. Severe global warming (>3°C MAT) would result in either a drastic decline in productivity or local populations being extirpated in southern SPUs. New deployment strategies using the best seed sources for future reforestation may not only be able to mitigate the negative impact of global warming, but may even be able to increase productivity in some areas. [source] Non-medically supervised treatment interruptions among participants in a universally accessible antiretroviral therapy programmeHIV MEDICINE, Issue 5 2010DM Moore Background We examined clinical outcomes, patient characteristics and trends over time of non-medically supervised treatment interruptions (TIs) from a free-of-charge antiretroviral therapy (ART) programme in British Columbia (BC), Canada. Methods Data from ART-naďve individuals ,18 years old who initiated triple combination highly active antiretroviral therapy (HAART) between January 2000 and June 2006 were analysed. Participants having ,3 month gap in HAART coverage were defined as having a TI. Cox proportional hazards modelling was used to examine factors associated with TIs and to examine factors associated with resumption of treatment. Results A total of 1707 participants were study eligible and 643 (37.7%) experienced TIs. TIs within 1 year of ART initiation decreased from 29% of individuals in 2000 to 19% in 2006 (P<0.001). TIs were independently associated with a history of injection drug use (IDU) (P=0.02), higher baseline CD4 cell counts (P<0.001), hepatitis C co-infection (P<0.001) and the use of nelfinavir (NFV) (P=0.04) or zidovudine (ZDV)/lamivudine (3TC) (P=0.009) in the primary HAART regimen. Male gender (P<0.001), older age (P<0.001), AIDS at baseline (P=0.008) and having a physician who had prescribed HAART to fewer patients (P=0.03) were protective against TIs. Four hundred and eighty-eight (71.9%) participants eventually restarted ART with male patients and those who developed an AIDS-defining illness prior to their TI more likely to restart therapy. Higher CD4 cell counts at the time of TI and unknown hepatitis C status were associated with a reduced likelihood of restarting ART. Conclusion Treatment interruptions were associated with younger, less ill, female and IDU participants. Most participants with interruptions eventually restarted therapy. Interruptions occurred less frequently in recent years. [source] | |||||||||||||||||||||||||