Sampling Occasions (sampling + occasion)

Distribution by Scientific Domains


Selected Abstracts


All creatures great and small: patterns in the stream benthos across a wide range of metazoan body size

FRESHWATER BIOLOGY, Issue 3 2003
Tracey K. Stead
SUMMARY 1. The whole metazoan community (i.e. including the meiofauna) of an acidic, fishless stream in south-east England was surveyed over 14 months between March 1999 and April 2000. Invertebrate density, biomass and taxonomic richness were assessed on each sampling occasion in relation to physico-chemical variables. 2. The meiofauna were more numerous and diverse than the macrofauna, while their total biomass occasionally equalled that of the macrofauna. 3. The meiofaunal and macrofaunal assemblages appeared to respond to different environmental factors. The meiofauna showed genuine species turnover through the year, while the macrofauna varied less in taxonomic composition though there were substantial variations in density. 4. These data suggest that the meiofauna and macrofauna exist at different temporal and spatial scales and perceive their environment with a different ,grain'. [source]


Selection and sharing of sheltered nest sites by ants (Hymenoptera: Formicidae) in grasslands of the Australian Capital Territory

AUSTRALIAN JOURNAL OF ENTOMOLOGY, Issue 3 2008
Wayne A Robinson
Abstract, In this study, it was investigated whether ants nesting under artificial rocks in a mesic south-eastern Australian grassland showed preference for nest sites with different temperature regimes. The study also allowed evaluation of competition between species for nest sites and observations of seasonality in brood and alate production in the nests of four common ant groups. On every sampling occasion more than 90% of nests were either Iridomyrmex spp., Rhytidoponera ,metallica', Paratrechina sp. or Pheidole spp. Soil underneath thinner artificial rocks had higher average temperatures and warmed up earlier in the day and Iridomyrmex spp. and R. ,metallica' showed preference for establishing nests under these. While all ant nests had summer peaks in brood production, Iridomyrmex spp. and R. ,metallica' had brood observed throughout the year. Winged reproductives were commonly encountered in Iridomyrmex spp., R. ,metallica' and Paratrechina sp. nests, but only occasionally Pheidole spp. nests. Alates were present in the nests from February but released by all taxa after spring rains and were scarcely recorded in November, December and January when brood production was observed in most nests. Nest sites that offer protection from predators are an obvious advantage, but improved reproductive success can be gained in cool regions such as the mesic grasslands of the Australian Capital Territory by choosing nest sites with an optimal thermal regime. [source]


Different portions of the maize root system host Burkholderia cepacia populations with different degrees of genetic polymorphism

ENVIRONMENTAL MICROBIOLOGY, Issue 1 2000
Luigi Chiarini
In order to acquire a better understanding of the spatial and temporal variations of genetic diversity of Burkholderia cepacia populations in the rhizosphere of Zea mays, 161 strains were isolated from three portions of the maize root system at different soil depths and at three distinct plant growth stages. The genetic diversity among B. cepacia isolates was analysed by means of the random amplified polymorphic DNA (RAPD) technique. A number of diversity indices (richness, Shannon diversity, evenness and mean genetic distance) were calculated for each bacterial population isolated from the different root system portions. Moreover, the analysis of molecular variance ( amova) method was applied to estimate the genetic differences among the various bacterial populations. Our results showed that, in young plants, B. cepacia colonized preferentially the upper part of the root system, whereas in mature plants, B. cepacia was mostly recovered from the terminal part of the root system. This uneven distribution of B. cepacia cells among different root system portions partially reflected marked genetic differences among the B. cepacia populations isolated along maize roots on three distinct sampling occasions. In fact, all the diversity indices calculated indicated that genetic diversity increased during plant development and that the highest diversity values were found in mature maize plants, in particular in the middle and terminal portions of the root system. Moreover, the analysis of RAPD patterns by means of the amova method revealed highly significant divergences in the degree of genetic polymorphism among the various B. cepacia populations. [source]


Use of a novel nonantibiotic triple marker gene cassette to monitor high survival of Pseudomonas fluorescens SBW25 on winter wheat in the field

FEMS MICROBIOLOGY ECOLOGY, Issue 2 2008
Lotta Jäderlund
Abstract Pseudomonas fluorescens SBW25 was tagged with a triple marker gene cassette containing gfp, encoding green fluorescent protein; luxAB, encoding luciferase; and telABkilA, encoding tellurite resistance, and the tagged strain was monitored in the first Swedish field release of a genetically modified microorganism (GMM). The cells were inoculated onto winter wheat seeds and the GMM cells (SBW25,tgl) were monitored in the field from September 2005 to May 2006 using plating, luminometry and microscopic analyses. Cell numbers were high on all sampling occasions and metabolically active cells were detected on all plant parts. Field results were similar to those obtained in a parallel phytotron study, although the amount of SBW25,tgl detected on shoots was significantly higher in the phytotron than in the field. After winter, cell counts were 100-fold higher on the roots and root-associated soil compared with prewinter measurements, although the cells had a lower relative metabolic activity. The wheat seeds were naturally infested with Microdochium nivale, but no treatment resulted in reduction of disease symptoms. No SWB25,tgl cells were ever found in bulk soil or uninoculated plants. The Swedish field trial results complement and contrast with prior field studies performed with the same parent organism in the United Kingdom under different soil, plant and climatic conditions. [source]


Benthic metabolism in two turbid dryland rivers

FRESHWATER BIOLOGY, Issue 2 2009
CHRISTINE S. FELLOWS
Summary 1.,Australian dryland rivers have among the most variable discharge of any rivers worldwide and are characterized by extended periods of no flow during which aquatic habitat contracts into isolated waterholes. Despite naturally high turbidity, benthic primary production is known to be the main source of carbon to waterhole food webs. The objective of this study was to quantify rates of benthic metabolism and identify factors influencing these rates in two Australian dryland rivers, the Cooper Creek and the Warrego River. 2.,Both rivers have similar variable hydrology and high levels of turbidity (photic depths < 0.4 m), but fish abundance in Cooper Creek is 10 times than that of the Warrego River. Therefore, an additional aim of the study was to determine if fish abundances reflected underlying differences in benthic primary production. 3.,Benthic gross primary production (GPP), benthic respiration, nutrient concentrations and light penetration were measured immediately after flow had ceased (,post-flow') and after at least 2 months of zero flow (,no-flow') in 15 waterholes from each river. A subset of four waterholes from each river was sampled on two additional occasions to determine if patterns were consistent over time. 4. Cooper Creek generally had higher rates of GPP and a more autotrophic benthic zone than the Warrego River. As a result, the expected positive relationship between fish abundance and GPP was generally observed at a broad catchment scale. 4.,Light was the major control in benthic GPP in both rivers, as nutrient concentrations were high on all sampling occasions. However, for similar values of photic depth, GPP was greater in Cooper Creek than in the Warrego River. This suggests that more frequent disturbance of the littoral zone may inhibit biofilm development in waterholes of the Warrego River. 5.,Although flow variability in dryland rivers is extreme compared with other rivers worldwide, cycles of expansion and contraction of aquatic habitat in these two rivers were associated with a shift in the dominance of regional scale (subcatchments contributing to river flow) versus local scale (waterhole morphology) influences on ecosystem functioning, similar to floodplain rivers in tropical and temperate regions. [source]


Testing species,stone area and species,bryophyte cover relationships in riverine macroinvertebrates at small scales

FRESHWATER BIOLOGY, Issue 3 2008
JANI HEINO
Summary 1. The species,area relationship is considered amongst the few genuine laws in ecology. Although positive species richness,stone area relationships have been found previously in stream systems, very few studies have simultaneously examined species,individuals, individuals,area, species,bryophyte biomass and individuals,bryophyte biomass relationships. We examined these relationships based on temporally replicated assessments of macroinvertebrates on stones at two river sites. 2. We found only one significant species,area relationship out of six relationship tested, and two significant individuals,area relationships. Even these significant relationships were weak, however. By contrast, we detected significant and rather strong relationships between species richness and the number of individuals at both river sites on all three sampling dates. We also found significant relationships of both species richness and the number of individuals with bryophyte biomass at both river sites on all sampling occasions. One of the river sites was disturbed by a bulldozer, and the species,bryophyte biomass relationships were somewhat stronger after the disturbance event. 3. Our findings are quite surprising, given that there were very weak species,area relationships on stream stones. By contrast, our results suggest a pivotal role for bryophyte biomass in determining the species richness and the number of individuals of stream macroinvertebrates at this small scale. The most probably origin of these relationships begins with bryophyte cover, which determines the number of individuals, and subsequently passively affects species richness. Thus, there is not necessarily a direct mechanism that determines the variability of species richness on stream stones. 4. Experimental studies are needed to disentangle the various mechanisms (e.g. passive sampling, provision of more food, more niche space, flood disturbance refugia) by which bryophyte biomass affects stream macroinvertebrates. [source]


A mark,recapture study of the caecilian amphibian Gegeneophis ramaswamii (Amphibia: Gymnophiona: Caeciliidae) in southern India

JOURNAL OF ZOOLOGY, Issue 2 2003
G. John Measey
Abstract The potentially important ecology of subterranean predators of soil ecosystem engineers is poorly understood. This is especially true of caecilian amphibians (Gymnophiona) for which there are virtually no quantitative data. Results of the first field trials of permanent marking in caecilians are presented. A preliminary assessment is made of the efficacy of mark,recapture studies for estimating population size of Gegeneophis ramaswamii Taylor in 100 m2 of low intensity agriculture in Kerala, India. Over three sampling occasions spanning 58 days of the monsoon season, 114 individuals were captured, 104 marked and released, and 21 recaptured. Models estimate an open population of 60 individuals (95% confidence interval of 45.2 to 151.3), and a closed population of 236 (95% confidence interval of 174 to 351). A census interpretation of the raw capture data gives densities of about 0.31 to 0.48 m,2. Results suggest large movement in and out of the sampled area during the study. Despite caveats associated with these data, progress is made in identifying potential limitations and improvements in the methods used. This study highlights the paucity of knowledge of caecilian ecology, and the need for long-term studies to elucidate further ecological information and to monitor populations. [source]


Shrimp pond zooplankton dynamics and the efficiency of sampling effort

AQUACULTURE RESEARCH, Issue 5 2003
N P Preston
Abstract The abundance and species composition of zooplankton assemblages were examined in a commercial Penaeus monodon (Fabricius) aquaculture pond in subtropical Australia. Numbers and biomass of zooplankton in the surface tows (142 µm mesh) varied from 2080 L,1 (2466 µg L,1) to < 1 L,1 (15 µg L,1). Peak zooplankton abundance and biomass occurred at the beginning of the shrimp farm season. The small copepod Oithona australis Nishida was dominant during these peaks in abundance although other species were common, including small, low-salinity copepods in the first year and larger marine copepods in the second year. Irrespective of taxa or size, zooplankton abundance declined rapidly after the stocking of P. monodon postlarvae, indicating high levels of non-selective predation. For the remainder of the grow-out season, mean zooplankton abundance was below 1 L,1 in the first season and below 3 L,1 in the second season. The factors that maintain the abundance of these zooplankton assemblages at these relatively low levels are poorly understood but may include a deterioration pond water quality. At these lower levels of abundance, the copepods Acartia pacifica Steuer and Acartia sinjiensis Mori were relatively common during the middle phase of the production season, with barnacle nauplii increasing in abundance during the later stages of the grow-out season. Analysis of fixed effects showed that there were significant differences in total zooplankton abundance between farm production seasons and occasion within season, and time (day or night). Analysis of random effects demonstrated that the dominant source of variation, in total zooplankton abundance, was day-to-day changes within sampling occasions. The complexity of temporal and spatial patterns in the abundance, distribution and composition of zooplankton assemblages in shrimp ponds presents significant challenges in designing sampling programmes that accurately quantify temporal or spatial trends. Our results have shown that sampling for more than four consecutive days, at more than one site, is necessary to accurately assess such trends. [source]