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Ring B (ring + b)
Selected AbstractsDomino Reaction of Acyclic ,,,-Dialkenoylketene S,S -Acetals and Diamines: Efficient Synthesis of Tetracyclic Thieno[2,3- b]thiopyran-Fused Imidazo[1,2- a]pyridine/Pyrido[1,2- a]pyrimidinesADVANCED SYNTHESIS & CATALYSIS (PREVIOUSLY: JOURNAL FUER PRAKTISCHE CHEMIE), Issue 14 2006Fushun Liang Abstract A series of unusual fused tetraheterocyclic compounds 3, consisting of a thiopyran (ring A), a thiophene (ring B), a pyridine (ring C), and an imidazole or a pyrimidine (ring D) core, with a bridgehead nitrogen and an angular methyl group, were successfully synthesized by a catalyst-free, one-pot, two-component domino reaction of 4-(4-methyl-1,3-dithiol-2-ylidene)-1,7-bis(aryl/heteroaryl)hepta-1,6-diene-3,5-dione 2 and diamines. In this reaction, up to five new bonds were formed accompanied by the CS bond cleavage of the 1,3-dithiole ring of 2, with water as the only by-product. [source] Structure elucidation, conformational analysis and thermal effects on membrane bilayers of an antimicrobial myricetin ether derivativeJOURNAL OF HETEROCYCLIC CHEMISTRY, Issue 3 2001C. Demetzos The membrane perturbing 3,7,4,,5,-tetramethyl ether of myricetin 1 was isolated from Cistus monspelien-sis L. Its structure was elucidated and its conformational properties were explored using a combination of 2D NMR spectroscopy and computational chemistry. The obtained results showed that compound 1 adopts four enantiomeric pairs of low energy conformers characterized: (a) by an aromatic ring B twisted through rotation about C2-C1, bond from the rigid isoflavone ring; (b) a 4,-O-CH3 bond oriented out of the plane with equal probability upwards or downwards the phenyl ring B, while all the other O-CH3 bonds are oriented in the plane of the aryl ring. Two of these enantiomeric pairs are lowest in energy. These possible bioactive con-formers are possibly stabilized by van Der Waals interactions. The 3,,5-diacetyl derivative 2 of compound 1 was synthesized and its structure elucidation was achieved based on the chemical shift assignment of the parent compound 1. The Differential Scanning Calorimetry (DSC) results revealed that the degree of the thermal effects exerted by the flavonoids at dipalmitoylphosphatidyl choline (DPPC) bilayers followed the order 1 > 2 > myricetin. Their antimicrobial activity against Gram positive bacteria followed the same order. [source] Structural conformations and electronic interactions of the natural product, oroxylin: a vibrational spectroscopic studyJOURNAL OF RAMAN SPECTROSCOPY, Issue 12 2008Jose P. Abraham Abstract The oroxylin, 5,7-dihydroxy 6-methoxy flavone is a potent natural product extracted from ,Vitex peduncularis'. Density functional theory (DFT) at B3LYP/6-311G(d,p) level has been used to compute energies of different conformers of oroxylin to find out their stability, the optimized geometry of the most stable conformer and its vibrational spectrum. The conformer ORLN-1 with torsion angles 0, 180, 180 and 0 degrees, respectively, for H13O12C6C5, H14O10C4C5, H13O12C6C5 and H14O10C4C5 is found to be most stable. The optimized geometry reveals that the dihedral angle , between phenyl ring B and the chrome part of the molecule in , 19.21° is due to the repulsive force due to steric interaction between the ortho-hydrogen atom H29 of the B ring and H18 of the ring C (H29·H18 = 2.198 Ĺ). A vibrational analysis based on the near-infrared Fourier transform(NIR-FT) Raman, Fourier transform-infrared (FT-IR) and the computed spectrum reveals that the methoxy group is influenced by the oxygen lone pair-aryl pz orbital by back donation. Hence the stretching and bending vibrational modes of the methoxy group possess the lowest wavenumber from the normal values of methyl group. The carbonyl stretching vibrations have been lowered due to conjugation and hydrogen bonding in the molecules. The intramolecular H-bonding and nonbonded intramolecular interactions shift the band position of O10H14 and O12H13 stretching modes, which is justified by DFT results. Copyright © 2008 John Wiley & Sons, Ltd. [source] Raman and pulse radiolysis studies of the antioxidant properties of quercetin: Cu(II) chelation and oxidizing radical scavengingJOURNAL OF RAMAN SPECTROSCOPY, Issue 5 2005Armida Torreggiani Abstract Quercetin (Querc), a pentahydroxyflavonol, is suggested to give protection to living organisms by both direct scavenging of free radicals and metal chelation. The scavenging ability of Querc towards oxidizing radicals, such as ,OH, N3, and NO2,, was evaluated by pulse radiolysis studies in aqueous solutions at different pH. Phenoxyl radicals are the final transient products and are formed either by water elimination from ,OH-adducts or by one-electron transfer from the deprotonated OH groups. Their formation rate is strongly affected by pH and reaches the maximum values in alkaline medium. The Raman and IR spectra were useful to assess the relevant interaction of Querc with Cu(II) ions, which play an important role in the metal-catalysed generation of reactive oxygen species. Depending on pH and the metal-to-ligand ratio, the different chelating sites of Querc change their ability to complex copper ions. Under neutral conditions, the 5-OH group of ring A and CO-4 of ring C have a chelating power superior to that of the catechol group (ring B), whereas the complexation in alkaline medium occurs in the reverse order. In addition, experiments with Querc and Zn(II) ions, carried out at basic pH in order to verify the possible Cu(II)-catalysed oxidation of the ligand, indicated the absence of the above process. Copyright © 2005 John Wiley & Sons, Ltd. [source] New oxidized sterols from Aspergillus awamori and the endo -boat conformation adopted by the cyclohexene oxide systemMAGNETIC RESONANCE IN CHEMISTRY, Issue 1 2010Hao Gao Abstract Two new oxidized sterols 1 and 2 were obtained from the active fraction of a mangrove fungus Aspergillus awamori isolated from the soils around the mangrove plant Acrostichum speciosum. Their structures were elucidated using spectroscopic methods as 22E -7,-methoxy-5,,6,-epoxyergosta-8(14),22-dien-3,-ol (1) and 22E -3,-hydroxy-5,,6,,8,,14,-diepoxyergosta-22-en-7-one (2). The NMR data and complete assignments for both DMSO- d6 and CDCl3 were given. Their cytotoxic activity against A549 cell line was evaluated. Furthermore, the detailed conformation analysis for ring B (cyclohexene oxide system) of sterol 1 was given on the basis of NOEs. The endo -boat conformation was considered as the preferred conformation for ring B rather than half-chair conformation. Copyright © 2009 John Wiley & Sons, Ltd. [source] Analysis of sesterterpenoids from Aspergillus terreus using ESI-QTOF and ESI-ITPHYTOCHEMICAL ANALYSIS, Issue 4 2010Zhi-Jun Wu Abstract Introduction , Biosynthesis of terretonin was studied due to the interesting skeleton of this series of sesterterpenoids. Very recently, López-Gresa reported two new sesterterpenoids (terretonins E and F) which are inhibitors of the mammalian mitochondrial respiratory chain. Mass spectrometry (MS), especially tandem mass spectrometry, has been one of the most important physicochemical methods for the identification of trace natural products due to it rapidity, sensitivity and low levels of sample consumption. The potential application prospect and unique skeleton prompted us to study structural characterisation using MS. Objective , To obtain sufficient information for rapid structural elucidation of this class of compounds using MS. Methodology , The elemental composition of the product ions was confirmed by low-energy ESI-CID-QTOF-MS/MS analyses. The fragmentation pathways were postulated on the basis of ESI-QTOF-MS/MS/MS and ESI-IT-MSn spectra. Common features and major differences between ESI-QTOF-MS/MS and IT-MSn spectra were compared. For ESI-QTOF-MS/MS/MS experiments, capillary exit voltage was raised to induce in-source dissociation. Ammonium acetate or acetic acid were added into solutions to improve the intensity of [M + H]+. The collision energy was optimised to achieve sufficient fragmentation. Some fragmentation pathways were unambiguously proposed by the variety of abundance of fragment ions at different collision energies even without MSn spectra. Results , Fragmentation pathways of five representative sesterterpenoids were elucidated using ESI-QTOF-MS/MS/MS and ESI-IT-MSn in both positive- and negative-ion mode. The key group of characterising fragmentation profiles was ring B, and these fragmentation patterns are helpful to identify different types of sestertepenoids. Conclusion , Complementary information obtained from fragmentation experiments of [M + H]+ (or [M + NH4]+) and [M , H], precursor ions is especially valuable for rapid identification of this kind of sesterterpenoid. [source] Negative ion ,chip-based' nanospray tandem mass spectrometry for the analysis of flavonoids in glandular trichomes of Lychnophora ericoides Mart. (Asteraceae)RAPID COMMUNICATIONS IN MASS SPECTROMETRY, Issue 23 2008Leonardo Gobbo-Neto This paper reports a method for the analysis of secondary metabolites stored in glandular trichomes, employing negative ion ,chip-based' nanospray tandem mass spectrometry. The analyses of glandular trichomes from Lychnophora ericoides, a plant endemic to the Brazilian ,cerrado' and used in traditional medicine as an anti-inflammatory and analgesic agent, led to the identification of five flavonoids (chrysin, pinocembrin, pinostrobin, pinobanksin and 3- O -acetylpinobanksin) by direct infusion of the extracts of glandular trichomes into the nanospray ionisation source. All the flavonoids have no oxidation at ring B, which resulted in a modification of the fragmentation pathways compared with that of the oxidised 3,4-dihydroflavonoids already described in the literature. The absence of the anti-inflammatory and antioxidant di- C -glucosylflavone vicenin-2, or any other flavonoid glycosides, in the glandular trichomes was also demonstrated. The use of the ,chip-based' nanospray QqTOF apparatus is a new fast and useful tool for the identification of secondary metabolites stored in the glandular trichomes, which can be useful for chemotaxonomic studies based on metabolites from glandular trichomes. Copyright © 2008 John Wiley & Sons, Ltd. [source] 6,-Hydroxy-5,-methyl-20-oxo-19-norpregn-9(10)-en-3,-yl acetateACTA CRYSTALLOGRAPHICA SECTION C, Issue 5 2009R. M. A. Pinto In the title compound, C23H34O4, which is an intermediate in the synthesis of pregnane derivatives with a modified skeleton that show potent abortion-inducing activity, the conformation of ring B is close to half-chair due to the presence of both the C=C double bond and the axial 5,-methyl group. Rings A and C have conformations close to chair, while ring D has a twisted conformation around the bridgehead C,C bond. Molecules are hydrogen bonded via the hydroxyl and acetoxy groups into infinite chains. Quantum-mechanical ab initio Roothan Hartree,Fock calculations show that crystal packing might be responsible for the low values of the angles between rings A and B, and between ring A and rings C and D, as well as for a different steric position of the methyl ketone side chain compared to the geometry of the free molecule. [source] | ||||||||||