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Relative Order (relative + order)
Selected AbstractsVisual Clustering in Parallel CoordinatesCOMPUTER GRAPHICS FORUM, Issue 3 2008Hong Zhou Abstract Parallel coordinates have been widely applied to visualize high-dimensional and multivariate data, discerning patterns within the data through visual clustering. However, the effectiveness of this technique on large data is reduced by edge clutter. In this paper, we present a novel framework to reduce edge clutter, consequently improving the effectiveness of visual clustering. We exploit curved edges and optimize the arrangement of these curved edges by minimizing their curvature and maximizing the parallelism of adjacent edges. The overall visual clustering is improved by adjusting the shape of the edges while keeping their relative order. The experiments on several representative datasets demonstrate the effectiveness of our approach. [source] Prosodic structure and syntactic acquisition: the case of the head-direction parameterDEVELOPMENTAL SCIENCE, Issue 2 2003Anne Christophe We propose that infants may learn about the relative order of heads and complements in their language before they know many words, on the basis of prosodic information (relative prominence within phonological phrases). We present experimental evidence that 6,12-week-old infants can discriminate two languages that differ in their head direction and its prosodic correlate, but have otherwise similar phonological properties (i.e. French and Turkish). This result supports the hypothesis that infants may use this kind of prosodic information to bootstrap their acquisition of word order. [source] It's all relative: ranking the diversity of aquatic bacterial communitiesENVIRONMENTAL MICROBIOLOGY, Issue 9 2008Allison K. Shaw Summary The study of microbial diversity patterns is hampered by the enormous diversity of microbial communities and the lack of resources to sample them exhaustively. For many questions about richness and evenness, however, one only needs to know the relative order of diversity among samples rather than total diversity. We used 16S libraries from the Global Ocean Survey to investigate the ability of 10 diversity statistics (including rarefaction, non-parametric, parametric, curve extrapolation and diversity indices) to assess the relative diversity of six aquatic bacterial communities. Overall, we found that the statistics yielded remarkably similar rankings of the samples for a given sequence similarity cut-off. This correspondence, despite the different underlying assumptions of the statistics, suggests that diversity statistics are a useful tool for ranking samples of microbial diversity. In addition, sequence similarity cut-off influenced the diversity ranking of the samples, demonstrating that diversity statistics can also be used to detect differences in phylogenetic structure among microbial communities. Finally, a subsampling analysis suggests that further sequencing from these particular clone libraries would not have substantially changed the richness rankings of the samples. [source] Competitive binding comparison of endocrine-disrupting compounds to recombinant androgen receptor from fathead minnow, rainbow trout, and humanENVIRONMENTAL TOXICOLOGY & CHEMISTRY, Issue 9 2007Vickie S. Wilson Abstract Typically, in vitro hazard assessments for the identification of endocrine-disrupting compounds (EDCs), including those outlined in the Endocrine Disruptor Screening and Testing Advisory Committee (EDSTAC) Tier 1 Screening protocols, utilize mammalian receptors. Evidence, however, exists that fish sex steroid hormone receptors differ from mammalian receptors both structurally and in their binding affinities for some steroids and environmental chemicals. Most of the binding studies to date have been conducted using cytosolic preparations from various tissues. In the present study, we compare competitive binding of a set of compounds to full-length recombinant rainbow trout androgen receptor , (rtAR), fathead minnow androgen receptor (fhAR), and human androgen receptor (hAR), each expressed in COS cells. Saturation binding and subsequent Scatchard analysis using [3H]R1881, a high-affinity synthetic androgen, revealed an equilibrium dissociation constant (Kd) of 0.11 nM for the rtAR, 1.8 nM for the fhAR, and 0.84 nM for the hAR. Compounds, including endogenous and synthetic steroids, known mammalian antiandrogens, and environmental compounds, were tested for competitive binding to each of the three receptors. Overall, agreement existed across receptors as to binding versus nonbinding for all compounds tested in this study. Minor differences, however, were found in the relative order of binding of the compounds to the individual receptors. Studies such as these will facilitate the identification of EDCs that may differentially affect specific species and aid in the development and support of future risk assessment protocols. [source] Macro- and Micro-Purge Soil-Gas Sampling Methods for the Collection of Contaminant VaporsGROUND WATER MONITORING & REMEDIATION, Issue 1 2009Brian A. Schumacher Purging influence on soil-gas concentrations for volatile organic compounds (VOCs), as affected by sampling tube inner diameter and sampling depth (i.e., system volume) for temporary probes in fine-grained soils, was evaluated at three different field sites. A macro-purge sampling system consisted of a standard, hollow, 3.2-cm outer diameter (OD) drive probe with a retractable sampling point attached to an appropriate length of 0.48-cm inner diameter (ID) Teflon® tubing. The macro-purge sampling system had a purge system volume of 24.5 mL at a 1-m depth. In contrast, the micro-purge sampling systems were slightly different between the field sites and consisted of a 1.27-cm OD drive rod with a 0.10-cm ID stainless steel tube or a 3.2-cm OD drive rod with a 0.0254-cm inner diameter stainless steel tubing resulting in purge system volumes of 1.2 and 7.05 mL at 1-m depths, respectively. At each site and location within the site, with a few exceptions, the same contaminants were identified in the same relative order of abundances indicating the sampling of the same general soil atmosphere. However, marked differences in VOC concentrations were identified between the sampling systems, with micro-purge samples having up to 27 times greater concentrations than their corresponding macro-purge samples. The higher concentrations are the result of a minimal disturbance of the ambient soil atmosphere during purging. The minimal soil-gas atmospheric disturbance of the micro-purge sampling system allowed for the collection of a sample that is more representative of the soil atmosphere surrounding the sampling point. That is, a sample that does not contain an atmosphere that has migrated from distance through the geologic material or from the surface in response to the vacuum induced during purging soil-gas concentrations. It is thus recommended that when soil-gas sampling is conducted using temporary probes in fine-grained soils, the sampling system use the smallest practical ID soil-gas tubing and minimize purge volume to obtain the soil-gas sample with minimal risk of leakage so that proper decisions, based on more representative soil-gas concentrations, about the site can be made. [source] Theoretical study of the reaction mechanism of proton transfer in glycinamideINTERNATIONAL JOURNAL OF QUANTUM CHEMISTRY, Issue 9 2006Liqun Zhang Abstract To investigate the tautomerism of glycinamide that is induced by proton transfer, we present detailed theoretical studies on the reaction mechanism of both the isolated gas phase and H2O-assisted proton transfer process of glycinamide, using density functional theory calculations by means of the B3LYP hybrid functional. Twenty-six geometries, including 10 significant transition states, were optimized, and these geometrical parameters are discussed in detail. The relative order of the activation energy for hydrogen atom transfer of all the conformers has been systematically explored in this essay. For the amido hydrogen atom transfer process, the relative order of the activation energy is: IV < II < III < I, while in the carbonic hydrogen atom transfer process, the relative order is IV > II > III > I. Meanwhile, the most favorable structure for both the amido hydrogen atom transfer and the carbonic hydrogen atom transfer has been found. The involvement of the water molecule not only can stabilize the transition states and the ground states, but can also reduce the activation energy greatly. The superior catalytic effect of H2O has been discussed in detail. © 2006 Wiley Periodicals, Inc. Int J Quantum Chem, 2006 [source] Inactivation of Bacillus spores in reconstituted skim milk by combined high pressure and heat treatmentJOURNAL OF APPLIED MICROBIOLOGY, Issue 1 2006K.J. Scurrah Abstract Aims:, To determine the resistance of a variety of Bacillus species spores to a combined high pressure and heat treatment; and to determine the affect of varying sporulation and treatment conditions on the level of inactivation achieved. Methods and Results:, Spores from eight Bacillus species (40 isolates) were high pressure,heat treated at 600 MPa, 1 min, initial temperature 72°C. The level of inactivation was broad (no inactivation to 6 log10 spores ml,1 reduction) and it varied within species. Different sporulation agar, high pressure equipment and pressure-transmitting fluid significantly affected the response of some isolates. Varying the initial treatment temperature (75, 85 or 95°C) shifted the relative order of isolate high pressure,heat resistance. Conclusions:, The response of Bacillus spores to combined high pressure,heat treatment is variable and can be attributed to both intrinsic and extrinsic factors. The combined process resulted in a high level of spore inactivation for several Bacillus species and is a potential alternative treatment to traditional heat-only processes. Significance and Impact of the Study:, Sporulation conditions, processing conditions and treatment temperature all affect the response of Bacillus spores to the combined treatment of high pressure and heat. High levels of spore inactivation can be achieved but the response is variable both within and between species. [source] Lignans from Acanthopanax chiisanensis having an inhibitory activity on prostaglandin E2 productionPHYTOTHERAPY RESEARCH, Issue 2 2005Sanghyun Lee Abstract The chloroform and the ethyl acetate fractions from the roots of Acanthopanax chiisanensis exhibited the significant inhibition of TPA-induced prostaglandin E2 (PGE2) production in rat peritoneal macrophages. Five lignans were isolated from the chloroform fraction and their structures were elucidated as l -sesamin, helioxanthin, savinin, taiwanin C, and 3-(3,4-dimethoxybenzyl)-2-(3,4-methylenedioxybenzyl)butyrolactone. Among the lignans tested, taiwanin C showed the most potent inhibitory activity (IC50 = 0.12 µM) on PGE2 production with the relative order of potency, taiwanin C , 3-(3,4-dimethoxybenzyl)-2-(3,4-methylenedioxybenzyl)butyrolactone > savinin = helioxanthin. l -Sesamin showed no inhibitory activity at 30 µM. Copyright © 2005 John Wiley & Sons, Ltd. [source] The acute hypoxic ventilatory response under halothane, isoflurane, and sevoflurane anaesthesia in rats,ANAESTHESIA, Issue 3 2010N. Karanovic Summary The relative order of potency of anaesthetic agents on the hypoxic ventilatory response has been tested in humans, but animal data are sparse. We examined the effects of 1.4, 1.6, 1.8, and 2.0 MAC halothane, isoflurane, and sevoflurane on phrenic nerve activity in euoxia (baseline) and during acute normocapnic hypoxia (inspired oxygen fraction 0.09) in adult male Sprague-Dawley rats. With halothane, all animals became apnoeic even in euoxia, and the hypoxic response was completely abolished at all anaesthetic levels. With isoflurane, 5 of 14 animals exhibited phrenic nerve activity in euoxia at 1.4 MAC and demonstrated a hypoxic response (302% of baseline activity), but all became apnoeic and lost the hypoxic response at higher doses. With sevoflurane, phrenic nerve activity and a hypoxic response was preserved in at least some animals at all doses (i.e. even the highest dose of 2.0 MAC). Similar to the rank order of potency previously observed in humans, the relative order of potency of depression of the hypoxic ventilatory response in rats was halothane (most depressive) > isoflurane > sevoflurane (p = 0.01 for differences between agents). [source] | |||||||||||||