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Recurrent Pattern (recurrent + pattern)
Selected AbstractsA critical review of ontogenetic development in Terebellidae (Polychaeta)ACTA ZOOLOGICA, Issue 4 2010André R. S. Garraffoni Abstract Garraffoni, A.R.S. and Lana, P.C. 2009. A critical review of ontogenetic development in Terebellidae (Polychaeta). ,Acta Zoologica (Stockholm) 91: 390,401. This study reviews the ontogenetic variability of the head, the first segments and the uncini in Terebellidae, based on primary literature and development series of four terebellid species. We test hypotheses on character homologies and indicate informative characters for future phylogenetic analyses. The prostomium, identified as the region above the prototroch band of the larva, in addition to being the region of origin of the buccal tentacles, contains a series of nerves originating from the cerebrum. The peristomium, which contains the mouth, is innervated by the stomogastric nerve and consists of upper and lower lips and an internal pharynx. The loss of the first notochaetae and neurochaetae in the course of development is a recurrent pattern in terebellids. The claviform chaetae disappear with age and growth, and can be used to define the larval stage. Chaetogenesis shows that the long shaft-shaped manubrium and posterior process develop from different regions. The uncini terminology ,double rows' was reinterpreted and renamed ,inverted rows', which better reflects the inversion of chaetal positions during ontogenetic development. [source] Stage-specific alterations of the genome, transcriptome, and proteome during colorectal carcinogenesis,GENES, CHROMOSOMES AND CANCER, Issue 1 2007Jens K. Habermann To identify sequential alterations of the genome, transcriptome, and proteome during colorectal cancer progression, we have analyzed tissue samples from 36 patients, including the complete mucosa-adenoma-carcinoma sequence from 8 patients. Comparative genomic hybridization (CGH) revealed patterns of stage specific, recurrent genomic imbalances. Gene expression analysis on 9K cDNA arrays identified 58 genes differentially expressed between normal mucosa and adenoma, 116 genes between adenoma and carcinoma, and 158 genes between primary carcinoma and liver metastasis (P < 0.001). Parallel analysis of our samples by CGH and expression profiling revealed a direct correlation of chromosomal copy number changes with chromosome-specific average gene expression levels. Protein expression was analyzed by two-dimensional gel electrophoresis and subsequent mass spectrometry. Although there was no direct match of differentially expressed proteins and genes, the majority of them belonged to identical pathways or networks. In conclusion, increasing genomic instability and a recurrent pattern of chromosomal imbalances as well as specific gene and protein expression changes correlate with distinct stages of colorectal cancer progression. Chromosomal aneuploidies directly affect average resident gene expression levels, thereby contributing to a massive deregulation of the cellular transcriptome. The identification of novel genes and proteins might deliver molecular targets for diagnostic and therapeutic interventions. © Wiley-Liss, Inc. [source] Huge primary osteosarcoma of the liver presenting an aggressive recurrent pattern following surgical resectionJOURNAL OF DIGESTIVE DISEASES, Issue 3 2009Seong Heum PARK [source] ESDP as a Transatlantic Issue: Problems of Mutual Ambiguity,INTERNATIONAL STUDIES REVIEW, Issue 3 2004Ingo Peters European Security and Defense Policy (ESDP) has become a contentious subject in transatlantic security relations. This essay identifies the ambiguities that have occurred in the policymaking on both sides of the Atlantic that appear to have generated a basic lack of confidence and trust in the other side's good intentions and commitment to cooperation. It does so by sketching three historical time periods,1981,1986, 1988,1996, and 1998,2004,that convey the recurrent patterns and outcomes in the ESDP dispute. These three cases cover the periods (1) from the London Report on European Political Cooperation to the Single European Act and the Western European Union Security Platform, (2) the Maastricht Negotiations on a Common Foreign and Security Policy, and (3) the evolution of ESDP from St. Malo to Brussels. [source] Validation of plant functional types across two contrasting landscapesJOURNAL OF VEGETATION SCIENCE, Issue 2 2002Michael Kleyer Disturbance; Fertility; Logistic regression; Trait; Urban landscape Abstract. The validation of plant functional type models across contrasting landscapes is seen as a step towards the claim that plant functional types should recur regionally or even globally. I sampled the vegetation of an urban landscape on a range of sites representing gradients of resource supply and disturbance intensity. A group of plants with similar attributes was considered a ,functional type', if the species significantly co-occurred in a certain segment of the gradient plane of resource supply and disturbance intensity. Vegetative and regeneration traits were considered. A similar study was performed in a nearby agricultural landscape (Kleyer 1999). The logistic regression models from the urban landscape were applied to the data set of the agricultural landscape and vice versa. Although the overall environment of the two landscapes was very different, recurrent patterns of several functional types were found. At high fertility and high disturbance levels, annual species predominated with a persistent seed bank, high seed output, and short vertical expansion. When disturbances changed from below-ground to above-ground, the sexual regeneration mode was replaced by the vegetative mode, while vertical expansion remained low. At medium disturbance intensities, the vertical expansion and vegetative regeneration increased with fertility, while the seed bank remained mostly transient to short-term persistent and lateral expansion and sexual regeneration was intermediate. At low disturbances and low resource supplies, seed bank longevity, and vertical and lateral expansion tended to be long. Diversity of groups of plants with similar attributes was highest at intermediate disturbance levels and low fertility. These results correspond with Grime's humped-back model and Connell's intermediate disturbance hypothesis. [source] Comparative phylogeography of unglaciated eastern North AmericaMOLECULAR ECOLOGY, Issue 14 2006DOUGLAS E. SOLTIS Abstract Regional phylogeographical studies involving co-distributed animal and plant species have been conducted for several areas, most notably for Europe and the Pacific Northwest of North America. Until recently, phylogeographical studies in unglaciated eastern North America have been largely limited to animals. As more studies emerge for diverse lineages (including plants), it seems timely to assess the phylogeography across this region: (i) comparing and contrasting the patterns seen in plants and animals; (ii) assessing the extent of pseudocongruence; and (iii) discussing the potential applications of regional phylogeography to issues in ecology, such as response to climatic change. Unglaciated eastern North America is a large, geologically and topographically complex area with the species examined having diverse distributions. Nonetheless, some recurrent patterns emerge: (i) maritime , Atlantic vs. Gulf Coast; (ii) Apalachicola River discontinuity; (iii) Tombigbee River discontinuity; (iv) the Appalachian Mountain discontinuity; (v) the Mississippi River discontinuity; and (vi) the Apalachicola River and Mississippi River discontinuities. Although initially documented in animals, most of these patterns are also apparent in plants, providing support for phylogeographical generalizations. These patterns may generally be attributable to isolation and differentiation during Pleistocene glaciation, but in some cases may be older (Pliocene). Molecular studies sometimes agree with longstanding hypotheses of glacial refugia, but also suggest additional possible refugia, such as the southern Appalachian Mountains and areas close to the Laurentide Ice Sheet. Many species exhibit distinct patterns that reflect the unique, rather than the shared, aspects of species' phylogeographical histories. Furthermore, similar modern phylogeographical patterns can result from different underlying causal factors operating at different times (i.e. pseudocongruence). One underemphasized component of pseudocongruence may result from the efforts of researchers to categorize patterns visually , similar patterns may, in fact, not fully coincide, and inferring agreement may obscure the actual patterns and lead to erroneous conclusions. Our modelling analyses indicate no clear spatial patterning and support the hypothesis that phylogeographical structure in diverse temperate taxa is complex and was not shaped by just a few barriers. [source] | |||||||||||||