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Pentose-phosphate Pathway (pentose-phosphate + pathway)
Selected AbstractsThe pentose-phosphate pathway in neuronal survival against nitrosative stressIUBMB LIFE, Issue 1 2010Juan P. Bolaños Abstract Neurons are thought to be particularly vulnerable cells against reactive oxygen and nitrogen species (RONS) damage (nitrosative stress), due in part to their weak antioxidant defense and low ability to compensate energy homeostasis. Intriguingly, nitrosative stress efficiently stimulates the rate of the antioxidant pentose-phosphate pathway (PPP), which generates NADPH a necessary cofactor for the reduction of glutathione disulfide. In fact, inhibition of PPP sensitizes cultured neurons to glutathione oxidation and apoptotic death, whereas its stimulation confers resistance to nitrosative stress. Furthermore, we recently described that neurons can preferentially use glucose through the PPP by inhibiting glycolysis, which is achieved by continuously degrading the glycolytic positive-effector protein, 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase-3 (Pfkfb3) by the action of the E3 ubiquitine ligase anaphase-promoting complex/cyclosome (APC/C)Cdh1. These results suggest that the antioxidant fragility of neurons may be compensated by the PPP at the expense of inhibiting bioenergetic glycolysis. © 2009 IUBMB IUBMB Life, 62(1):14,18, 2010 [source] CLONAL HERBAL EXTRACTS AS ELICITORS OF PHENOLIC SYNTHESIS IN DARK-GERMINATED MUNGBEANS FOR IMPROVING NUTRITIONAL VALUE WITH IMPLICATIONS FOR FOOD SAFETYJOURNAL OF FOOD BIOCHEMISTRY, Issue 3 2002PATRICK McCUE ABSTRACT Plant phenolics are secondary metabolites that confer beneficial properties to the plants that produce them. Extracts made from plants that produce these phytochemicals are increasingly being recognized for their antimicrobial properties. In this study, we investigated extracts made from high-phenolics-producing clonal lines of oregano and thyme for potential as elicitors of phenolic antioxidant production in dark-germinated mungbean (Vigna radiata,). Mungbean was dark-germinated under the rationale that any energy stored in the bean seed in the form of starch may potentially be utilized for enhanced phenolics production, since without a light source the dark-germinated seedling may not stimulate the development of photosynthetic components. Wafer-based herb extracts showed the greatest ability to stimulate phenolic content in dark-germinated mungbeans. Three of the oregano extracts were investigated further and showed an ability to stimulate glucose-6-phosphate dehydrogenase (G6PDH), guaiacol peroxidase (GPX), and antioxidant activity. These results suggest that the extracts contain an active elicitor that stimulates phenolic antioxidant content, as well as activity of the pentose-phosphate pathway. In addition, the results of this study suggest that extracts of high-phenolics-producing clonal plants may have potential in the food and agriculture industry as seed treatments for preventing bacterial infection in germinating sprouts by stimulating phenolic antioxidant-producing pathways, as well as for increasing the nutritional value of sprouts for human consumption. [source] Knockout of major leaf ferredoxin reveals new redox-regulatory adaptations in Arabidopsis thalianaPHYSIOLOGIA PLANTARUM, Issue 3 2008Ingo Voss Ferredoxins are the major distributors for electrons to the various acceptor systems in plastids. In green tissues, ferredoxins are reduced by photosynthetic electron flow in the light, while in heterotrophic tissues, nicotinamide adenine dinucleotide (reduced) (NADPH) generated in the oxidative pentose-phosphate pathway (OPP) is the reductant. We have used a Ds -T-DNA insertion line of Arabidopsis thaliana for the gene encoding the major leaf ferredoxin (Fd2, At1g60950) to create a situation of high electron pressure in the thylakoids. Although these plants (Fd2-KO) possess only the minor fraction of leaf Fd1 (At1g10960), they grow photoautotrophically on soil, but with a lower growth rate and less chlorophyll. The more oxidized conditions in the stroma due to the formation of reactive oxygen species are causing a re-adjustment of the redox state in these plants that helps them to survive even under high light. Redox homeostasis is achieved by regulation at both, the post-translational and the transcriptional level. Over-reduction of the electron transport chain leads to increased transcription of the malate-valve enzyme NADP-malate dehydrogenase (MDH), and the oxidized stroma leads to an increased transcription of the OPP enzyme glucose-6-P dehydrogenase. In isolated spinach chloroplasts, oxidized conditions give rise to a decreased activation state of NADP-MDH and an activation of glucose-6-P dehydrogenase even in the light. In Fd2-KO plants, NADPH-requiring antioxidant systems are upregulated. These adjustments must be caused by plastid signals, and they prevent oxidative damage under rather severe conditions. [source] Staphylococcus aureus ClpC ATPase is a late growth phase effector of metabolism and persistencePROTEINS: STRUCTURE, FUNCTION AND BIOINFORMATICS, Issue 5 2009Indranil Chatterjee Dr. Abstract Staphylococcus aureus Clp ATPases (molecular chaperones) alter normal physiological functions including an aconitase-mediated effect on post-stationary growth, acetate catabolism, and entry into death phase (Chatterjee et al., J. Bacteriol. 2005, 187, 4488,4496). In the present study, the global function of ClpC in physiology, metabolism, and late-stationary phase survival was examined using DNA microarrays and 2-D PAGE followed by MALDI-TOF MS. The results suggest that ClpC is involved in regulating the expression of genes and/or proteins of gluconeogenesis, the pentose-phosphate pathway, pyruvate metabolism, the electron transport chain, nucleotide metabolism, oxidative stress, metal ion homeostasis, stringent response, and programmed cell death. Thus, one major function of ClpC is balancing late growth phase carbon metabolism. Furthermore, these changes in carbon metabolism result in alterations of the intracellular concentration of free NADH, the amount of cell-associated iron, and fatty acid metabolism. This study provides strong evidence for ClpC as a critical factor in staphylococcal energy metabolism, stress regulation, and late-stationary phase survival; therefore, these data provide important insight into the adaptation of S. aureus toward a persister state in chronic infections. [source] Preliminary X-ray crystallographic analysis of the d -xylulose 5-phosphate phosphoketolase from Lactococcus lactisACTA CRYSTALLOGRAPHICA SECTION F (ELECTRONIC), Issue 7 2010Georgiana Petrareanu Phosphoketolases are thiamine diphosphate-dependent enzymes which play a central role in the pentose-phosphate pathway of heterofermentative lactic acid bacteria. They belong to the family of aldehyde-lyases and in the presence of phosphate ion cleave the carbon,carbon bond of the specific substrate d -xylulose 5-phosphate (or d -fructose 6-phosphate) to give acetyl phosphate and d -glyceraldehyde 3-phosphate (or d -erythrose 4-phosphate). Structural information about phosphoketolases is particularly important in order to fully understand their mechanism as well as the steric course of phosphoketolase-catalyzed reactions. Here, the purification, preliminary crystallization and crystallographic characterization of d -xylulose 5-phosphate phosphoketolase from Lactococcus lactis are reported. The presence of thiamine diphosphate during purification was essential for the enzymatic activity of the purified protein. The crystals belonged to the monoclinic space group P21. Diffraction data were obtained to a resolution of 2.2,Å. [source] Are UV-induced nonculturable Escherichia coli K-12 cells alive or dead?FEBS JOURNAL, Issue 12 2003Andrea Villarino Cells that have lost the ability to grow in culture could be defined operationally as either alive or dead depending on the method used to determine cell viability. As a consequence, the interpretation of the state of ,nonculturable' cells is often ambiguous. Escherichia coli K12 cells inactivated by UV-irradiation with a low (UV1) and a high (UV2) dose were used as a model of nonculturable cells. Cells inactivated by the UV1 dose lost ,culturability' but they were not lysed and maintained the capacity to respond to nutrient addition by protein synthesis and cell wall synthesis. The cells also retained both a high level of glucose transport and the capacity for metabolizing glucose. Moreover, during glucose incorporation, UV1-treated cells showed the capacity to respond to aeration conditions modifying their metabolic flux through the Embden,Meyerhof and pentose-phosphate pathways. However, nonculturable cells obtained by irradiation with the high UV2 dose showed several levels of metabolic imbalance and retained only residual metabolic activities. Nonculturable cells obtained by irradiation with UV1 and UV2 doses were diagnosed as active and inactive (dying) cells, respectively. [source] | |||||||||||||