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Observed Variance (observed + variance)
Selected AbstractsVegetation and topographic controls on sediment deposition and storage on gully beds in a degraded mountain areaEARTH SURFACE PROCESSES AND LANDFORMS, Issue 6 2009Armando Molina Abstract Active gully systems developed on highly weathered or loose parent material are an important source of runoff and sediment production in degraded areas. However, a decrease of land pressure may lead to a return of a partial vegetation cover, whereby gully beds are preferred recolonization spots. Although the current knowledge on the role of vegetation on reducing sediment production on slopes is well developed, few studies exist on the significance of restoring sediment transport pathways on the total sediment budget of degraded mountainous catchments. This study in the Ecuadorian Andes evaluates the potential of vegetation to stabilize active gully systems by trapping and retaining eroded sediment in the gully bed, and analyses the significance of vegetation restoration in the gully bed in reducing sediment export from degraded catchments. Field measurements on 138 gully segments located in 13 ephemeral steep gullies with different ground vegetation cover indicate that gully bed vegetation is the most important factor in promoting short-term (1,15 years) sediment deposition and gully stabilization. In well-vegetated gully systems ( , 30% of ground vegetation cover), 0.035 m3 m,1 of sediment is deposited yearly in the gully bed. Almost 50 per cent of the observed variance in sediment deposition volumes can be explained by the mean ground vegetation cover of the gully bed. The presence of vegetation in gully beds gives rise to the formation of vegetated buffer zones, which enhance short-term sediment trapping even in active gully systems in mountainous environments. Vegetation buffer zones are shown to modify the connectivity of sediment fluxes, as they reduce the transport efficiency of gully systems. First calculations on data on sediment deposition patterns in our study area show that gully bed deposition in response to gully bed revegetation can represent more than 25 per cent of the volume of sediment generated within the catchment. Our findings indicate that relatively small changes in landscape connectivity have the potential to create strong (positive) feedback loops between erosion and vegetation dynamics. Copyright © 2009 John Wiley & Sons, Ltd. [source] Microbial succession of nitrate-reducing bacteria in the rhizosphere of Poa alpina across a glacier foreland in the Central AlpsENVIRONMENTAL MICROBIOLOGY, Issue 9 2006K. Deiglmayr Summary Changes in community structure and activity of the dissimilatory nitrate-reducing community were investigated across a glacier foreland in the Central Alps to gain insight into the successional pattern of this functional group and the driving environmental factors. Bulk soil and rhizosphere soil of Poa alpina was sampled in five replicates in August during the flowering stage and in September after the first snowfalls along a gradient from 25 to 129 years after deglaciation and at a reference site outside the glacier foreland (> 2000 years deglaciated). In a laboratory-based assay, nitrate reductase activity was determined colorimetrically after 24 h of anaerobic incubation. In selected rhizosphere soil samples, the community structure of nitrate-reducing microorganisms was analysed by restriction fragment length polymorphism (RFLP) analysis using degenerate primers for the narG gene encoding the active site of the membrane-bound nitrate reductase. Clone libraries of the early (25 years) and late (129 years) succession were constructed and representative clones sequenced. The activity of the nitrate-reducing community increased significantly with age mainly due to higher carbon and nitrate availability in the late succession. The community structure, however, only showed a small shift over the 100 years of soil formation with pH explaining a major part (19%) of the observed variance. Clone library analysis of the early and late succession pointed to a trend of declining diversity with progressing age. Presumably, the pressure of competition on the nitrate reducers was relatively low in the early successional stage due to minor densities of microorganisms compared with the late stage; hence, a higher diversity could persist in this sparse environment. These results suggest that the nitrate reductase activity is regulated by environmental factors other than those shaping the genetic structure of the nitrate-reducing community. [source] A comparison of the relative contributions of temporal and spatial variation in the density of drifting invertebrates in a Dorset (U.K.) chalk streamFRESHWATER BIOLOGY, Issue 8 2008MARTIN W. NEALE Summary 1. Invertebrate drift is commonly investigated in streams, with the majority of studies focussed on temporal (typically diel) variation. In comparison, few studies have investigated spatial variation in drift and there is little consensus among them. We tested the hypothesis that spatial variation in invertebrate drift is as important as temporal variation. 2. The density of drifting invertebrates in a chalk stream was sampled using an array of nets arranged to determine vertical, lateral and longitudinal variation. Samples were collected at dawn, during the day, at dusk and by night, on four separate monthly occasions. Insecta and Crustacea were analysed separately to identify the effect of differing life history strategies. The density of drifting debris was also recorded, to act as a null model. 3. Time of day and vertical position together explained the majority of the variance in invertebrate drift (79% for Insecta and 97% for Crustacea), with drift densities higher at dusk and night, and nearer the stream bed. Independently, time of day (38%, Insecta; 52%, Crustacea) and vertical position (41%, Insecta; 45%, Crustacea) explained a similar amount of the observed variance. Month explained some of the variance in insect drift (9%) but none for Crustacea. 4. Variation in the density of drifting debris showed little in common with invertebrate drift. There was little variation associated with time of day and only 27% of the observed variation in debris could be explained by the factors investigated here, with month explaining the largest proportion (20%). We suggest the difference in drifting debris and invertebrates provides further evidence for a strong behavioural component in invertebrate drift. 5. Spatial variation in invertebrate drift can be of the same order of magnitude as the much-described diel temporal variation. The extent of this spatial variation poses problems when attempting to quantify invertebrate drift and we recommend that spatial replication should be incorporated into drift studies. [source] Processes governing river water quality identified by principal component analysisHYDROLOGICAL PROCESSES, Issue 16 2002I. Haag Abstract The present study demonstrates the usefulness of principal component analysis in condensing and interpreting multivariate time-series of water quality data. In a case study the water quality system of the lock-regulated part of the River Neckar (Germany) was analysed, with special emphasis on the oxygen budget. Pooled data of ten water quality parameters and discharge, which had been determined at six stations along a 200 km reach of the river between the years 1993 and 1998, were subjected to principal component analysis. The analysis yielded four stable principal components, explaining 72% of the total variance of the 11 parameters. The four components could be interpreted confidently in terms of underlying processes: biological activity, dilution by high discharge, seasonal effects and the influence of wastewater. From analysing the data of single stations separately, these processes were found to be active throughout the complete reach. Considering the oxygen budget of the river, the variance of biological activity, representing the counteracting processes of primary production and microbial degradation, was found to be most important. This principal component explained 79% of the observed variance of oxygen saturation. In contrast, the analysis of a reduced data set from the 1970s showed that oxygen saturation was then dominated by discharge and temperature variations. The findings indicate that the oxygen budget used to be governed directly by the emission of degradable matter, whereas nowadays eutrophication is most important for extreme oxygen concentrations. Therefore, controlling eutrophication has to be the primary goal, in order to mitigate the rare episodes of pronounced oxygen over- and undersaturation in the future. Copyright © 2002 John Wiley & Sons, Ltd. [source] Thymineless death is associated with loss of essential genetic information from the replication originMOLECULAR MICROBIOLOGY, Issue 6 2010Dipen P. Sangurdekar Summary Thymine starvation results in a terminal cellular condition known as thymineless death (TLD), which is the basis of action for several common antibiotics and anticancer drugs. We characterized the onset and progression of TLD in Escherichia coli and found that DNA damage is the only salient property that distinguishes cells irreversibly senesced under thymine starvation from cells reversibly arrested by the nucleotide limitation. The damage is manifested as the relative loss of genetic material spreading outward from the replication origin: the extent of TLD correlates with the progression of damage. The reduced lethality in mutants deficient in the RecFOR/JQ repair pathway also correlates with the extent of damage, which explains most of the observed variance in cell killing. We propose that such spatially localized and persistent DNA damage is the consequence of transcription-dependent initiation of replication in the thymine-starved cells and may be the underlying cause of TLD. [source] Amplified fragment length polymorphism fingerprints support limited gene flow among social spider populationsBIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY, Issue 2 2009DEBORAH SMITH We used DNA fingerprints to determine whether the population structure and colony composition of the cooperative social spider Stegodyphus dumicola are compatible with requirements of interdemic (,group') selection: differential proliferation of demes or groups and limited gene flow among groups. To investigate gene flow among groups, spiders were collected from nests at 21 collection sites in Namibia. Analysis of molecular variance showed a small but highly significant differentiation among geographic regions (,PT = 0.23, P = 0.001). Thirty-three nests at four collection sites (6,10 spiders per nest, 292 individual spiders) were investigated in more detail to evaluate variation within and among colonies and among collection sites. In these 33 nests, an average of 15% of loci (fingerprint bands) were polymorphic among nestmates; 16% of observed variance was partitioned among collection sites, 48% among nests within a collection site, and 36% among individuals within nests. Spatial autocorrelation analyses of spiders at three collection sites showed that the maximum extent of detectable spatial autocorrelation among individuals was approximately 30 m, indicating dispersal over greater distances is not typical. These results indicate limited gene flow among nests, as well as spatial structuring at the level of regions, local populations, and nests, compatible with interdemic selection. © 2009 The Linnean Society of London, Biological Journal of the Linnean Society, 2009, 97, 235,246. [source] A REAPPRAISAL OF BATEMAN'S CLASSIC STUDY OF INTRASEXUAL SELECTIONEVOLUTION, Issue 11 2007Brian F. Snyder Bateman's (1948) study showing greater variances in number of mates and reproductive success in male than female Drosophila melanogaster is a foundational paper in sexual selection. Here we show for the first time that his methods had flaws, including the elimination of genetic variance, sampling biases, miscalculations of fitness variances, statistical pseudo-replication, and selective presentation of data. We conclude that Bateman's results are unreliable, his conclusions are questionable, and his observed variances are similar to those expected under random mating. Despite our analysis, we do not intend this article as a criticism of Bateman; he accomplished his work without modern computational tools, and his approach was groundbreaking emphasizing the significance of fitness variance for sexual selection. However, this reanalysis has implications for what counts as evidence for sexual selection and we believe that our concerns should be of interest to contemporary students of sexual selection. We call for repetitions of Bateman's study using modern statistical and molecular methods. [source] | ||||||||||