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Nutrient Cycling (nutrient + cycling)
Selected AbstractsWoody plants modulate the temporal dynamics of soil moisture in a semi-arid mesquite savanna,ECOHYDROLOGY, Issue 1 2010Daniel L. Potts Abstract Climate variability and human activities interact to increase the abundance of woody plants in arid and semi-arid ecosystems worldwide. How woody plants interact with rainfall to influence patterns of soil moisture through time, at different depths in the soil profile and between neighboring landscape patches is poorly known. In a semi-arid mesquite savanna, we deployed a paired array of sensors beneath a mesquite canopy and in an adjacent open area to measure volumetric soil water content (,) every 30 min at several depths between 2004 and 2007. In addition, to quantify temporally dynamic variation in soil moisture between the two microsites and across soil depths we analysed , time-series using fast Fourier transforms (FFT). FFT analyses were consistent with the prediction that by reducing evaporative losses through shade and reducing rainfall inputs through canopy interception of small rainfall events, the mesquite canopy was associated with a decline in high-frequency (hour-to-hour and day-to-day) variation in shallow ,. Finally, we found that, in both microsites, high-frequency , variation declined with increasing soil depth as the influence of evaporative losses and inputs associated with smaller rainfall events declined. In this case, we argue that the buffering of shallow soil moisture against high-frequency variations can enhance nutrient cycling and alter the carbon cycle in dryland ecosystems. Copyright © 2009 John Wiley & Sons, Ltd. [source] Predator control of ecosystem nutrient dynamicsECOLOGY LETTERS, Issue 10 2010Oswald J. Schmitz Abstract Predators are predominantly valued for their ability to control prey, as indicators of high levels of biodiversity and as tourism attractions. This view, however, is incomplete because it does not acknowledge that predators may play a significant role in the delivery of critical life-support services such as ecosystem nutrient cycling. New research is beginning to show that predator effects on nutrient cycling are ubiquitous. These effects emerge from direct nutrient excretion, egestion or translocation within and across ecosystem boundaries after prey consumption, and from indirect effects mediated by predator interactions with prey. Depending on their behavioural ecology, predators can create heterogeneous or homogeneous nutrient distributions across natural landscapes. Because predator species are disproportionately vulnerable to elimination from ecosystems, we stand to lose much more from their disappearance than their simple charismatic attractiveness. [source] Towards an integration of ecological stoichiometry and the metabolic theory of ecology to better understand nutrient cyclingECOLOGY LETTERS, Issue 5 2009Andrew P. Allen Abstract Ecologists have long recognized that species are sustained by the flux, storage and turnover of two biological currencies: energy, which fuels biological metabolism and materials (i.e. chemical elements), which are used to construct biomass. Ecological theories often describe the dynamics of populations, communities and ecosystems in terms of either energy (e.g. population-dynamics theory) or materials (e.g. resource-competition theory). These two classes of theory have been formulated using different assumptions, and yield distinct, but often complementary predictions for the same or similar phenomena. For example, the energy-based equation of von Bertalanffy and the nutrient-based equation of Droop both describe growth. Yet, there is relatively little theoretical understanding of how these two distinct classes of theory, and the currencies they use, are interrelated. Here, we begin to address this issue by integrating models and concepts from two rapidly developing theories, the metabolic theory of ecology and ecological stoichiometry theory. We show how combining these theories, using recently published theory and data along with new theoretical formulations, leads to novel predictions on the flux, storage and turnover of energy and materials that apply to animals, plants and unicells. The theory and results presented here highlight the potential for developing a more general ecological theory that explicitly relates the energetics and stoichiometry of individuals, communities and ecosystems to subcellular structures and processes. We conclude by discussing the basic and applied implications of such a theory, and the prospects and challenges for further development. [source] Testing the assumptions of chronosequences in successionECOLOGY LETTERS, Issue 5 2008Edward A. Johnson Abstract Many introductory ecology textbooks illustrate succession, at least in part, by using certain classic studies (e.g. sand dunes, ponds/bogs, glacial till, and old fields) that substituted space for time (chronosequence) in determining the sequences of the succession. Despite past criticisms of this method, there is continued, often uncritical, use of chronosequences in current research on topics besides succession, including temporal changes in biodiversity, productivity, nutrient cycling, etc. To show the problem with chronosequence-based studies in general, we review evidence from studies that used non-chronosequence methods (such as long-term study of permanent plots, palynology, and stand reconstruction) to test the space-for-time substitution in four classic succession studies. In several cases, the tests have used the same locations and, in one case, the same plots as those in the original studies. We show that empirical evidence invalidates the chronosequence-based sequences inferred in these classic studies. [source] Effect of environmental variables on eukaryotic microbial community structure of land-fast Arctic sea iceENVIRONMENTAL MICROBIOLOGY, Issue 3 2010Brian Eddie Summary Sea ice microbial community structure affects carbon and nutrient cycling in polar seas, but its susceptibility to changing environmental conditions is not well understood. We studied the eukaryotic microbial community in sea ice cores recovered near Point Barrow, AK in May 2006 by documenting the composition of the community in relation to vertical depth within the cores, as well as light availability (mainly as variable snow cover) and nutrient concentrations. We applied a combination of epifluorescence microscopy, denaturing gradient gel electrophoresis and clone libraries of a section of the 18S rRNA gene in order to compare the community structure of the major eukaryotic microbial phylotypes in the ice. We find that the community composition of the sea ice is more affected by the depth horizon in the ice than by light availability, although there are significant differences in the abundance of some groups between light regimes. Epifluorescence microscopy shows a shift from predominantly heterotrophic life styles in the upper ice to autotrophy prevailing in the bottom ice. This is supported by the statistical analysis of the similarity between the samples based on the denaturing gradient gel electrophoresis banding patterns, which shows a clear difference between upper and lower ice sections with respect to phylotypes and their proportional abundance. Clone libraries constructed using diatom-specific primers confirm the high diversity of diatoms in the sea ice, and support the microscopic counts. Evidence of protistan grazing upon diatoms was also found in lower sections of the core, with implications for carbon and nutrient recycling in the ice. [source] Microbial functional structure of Montastraea faveolata, an important Caribbean reef-building coral, differs between healthy and yellow-band diseased coloniesENVIRONMENTAL MICROBIOLOGY, Issue 2 2010Nikole E. Kimes Summary A functional gene array (FGA), GeoChip 2.0, was used to assess the biogeochemical cycling potential of microbial communities associated with healthy and Caribbean yellow band diseased (YBD) Montastraea faveolata. Over 6700 genes were detected, providing evidence that the coral microbiome contains a diverse community of archaea, bacteria and fungi capable of fulfilling numerous functional niches. These included carbon, nitrogen and sulfur cycling, metal homeostasis and resistance, and xenobiotic contaminant degradation. A significant difference in functional structure was found between healthy and YBD M. faveolata colonies and those differences were specific to the physical niche examined. In the surface mucopolysaccharide layer (SML), only two of 31 functional categories investigated, cellulose degradation and nitrification, revealed significant differences, implying a very specific change in microbial functional potential. Coral tissue slurry, on the other hand, revealed significant changes in 10 of the 31 categories, suggesting a more generalized shift in functional potential involving various aspects of nutrient cycling, metal transformations and contaminant degradation. This study is the first broad screening of functional genes in coral-associated microbial communities and provides insights regarding their biogeochemical cycling capacity in healthy and diseased states. [source] Marine diatom species harbour distinct bacterial communitiesENVIRONMENTAL MICROBIOLOGY, Issue 6 2005Hans-Peter Grossart Summary We examined bacterial dynamics in batch cultures of two axenic marine diatoms (Thalassiosira rotula and Skeletonema costatum). The axenic diatoms were inoculated with natural bacterial assemblages and monitored by 4,6-diamidino-2-phenolindole (DAPI) counts, denaturing gradient gel electrophoresis (DGGE) with subsequent analysis of excised, sequenced 16S rRNA gene fragments, and fluorescence in situ hybridization (FISH) with group-specific 16S rRNA oligonucleotide probes. Our results show that algal growth exhibited pronounced differences in axenic treatments and when bacteria were present. Bacterial abundance and community structure greatly depended on species, growth and physiological status of even closely related algae. Free-living and phytoplankton-associated bacteria were very different from each other and were dominated by distinct phylogenetic groups. The diatom-associated bacteria mainly belonged to the Flavobacteria,Sphingobacteria group of the Bacteroidetes phylum whereas free-living bacteria, which were rather similar in both cultures, comprised mainly of members of the Roseobacter,group ,of ,,- Proteobacteria. ,Presence and disappearance of specific bacteria during algal growth indicated pronounced differences in environmental conditions over time and selection of bacteria highly adapted to the changing conditions. Tight interactions between marine bacteria and diatoms appear to be important for the decomposition of organic matter and nutrient cycling in the sea. [source] Effects of the herbicide hexazinone on nutrient cycling in a low-pH blueberry soilENVIRONMENTAL TOXICOLOGY, Issue 2 2004D. M. Vienneau Abstract The herbicide hexazinone was applied as the commercial formulation Velpar® L at field-rate (FR) concentrations of FR (14.77 ,g ai g,1), FR×5 (73.85 ,g ai g,1), FR×10 (147.70 ,g ai g,1), FR×50 (738.50 ,g ai g,1), and FR×100 (1477.00 ,g ai g,1) to acidic soil, pH 4.12, taken from a lowbush blueberry field. Hexazinone was tested for inhibitory effects on various transformations of the nitrogen cycle and soil respiration. Nitrogen fixation was unaffected by hexazinone levels up to FR×100 following a 4-week incubation period. Ammonification was initially inhibited by all levels of hexazinone, but after 4 weeks, ammonification in all treatment systems was equal to or greater than the control. Nitrification was more sensitive to hexazinone; however, application at a field-rate level caused no inhibition. Inhibitory effects were noted above FR after a 2-month endpoint analysis and above FR×5 after a 6-month endpoint analysis. Hexazinone concentrations up to and including FR×100 stimulated denitrification. Soil respiration was also stimulated over a 3-week period when applied at a level up to 100 times the recommended field rate. In general, it was found that when applied at the recommended field application rate, hexazinone does not adversely affect the nitrogen cycle or soil respiration in acidic lowbush blueberry soils. © 2004 Wiley Periodicals, Inc. Environ Toxicol 19: 115,122, 2004 [source] Size and phenotypic structure of microbial communities within soil profiles in relation to different playing areas on a UK golf courseEUROPEAN JOURNAL OF SOIL SCIENCE, Issue 5 2008M. D. Bartlett Summary Amenity turf accounts for up to 4% of land-use in urban areas, providing key refuges for both above- and below-ground biodiversity. Golf courses occupy the largest surface area of all sports facilities; however, only a limited amount of microbial ecology has been carried out to investigate differences in the size and structure of microbial communities of the soil. The soil microbial community is a key agent in nutrient cycling and delivery of other ecosystem goods and services; however, there has been little work focused on amenity turf ecosystems in the UK. A study of soil microbial community size and structure, on the range of playing areas maintained for the game of golf at a single golf course in relation to depth through the soil profile, was carried out. Soil from different playing areas showed significant differences in the size (measured using chloroform fumigation extraction) of the microbial community (P < 0.01), with a greater concentration of microbial biomass at 0,75 mm from the surface, compared with deeper zones (P < 0.01). Principal component analysis of phospholipid fatty acid (PLFA) biomarkers indicated that the community structure was significantly different at 0,75 mm from the surface on all areas of the golf course investigated (P < 0.05, in all cases). The PLFA biomarkers consistently associated with such discrimination were 16:0 and 18:1,9 c. These findings suggest that there is a consistently larger and similarly structured microbial community associated with the surface thatch layer, commonly found in amenity turf. [source] Importance of rhizodeposition in the coupling of plant and microbial productivityEUROPEAN JOURNAL OF SOIL SCIENCE, Issue 4 2003Eric Paterson Summary Plant roots influence the biological, chemical and physical properties of rhizosphere soil. These effects are a consequence of their growth, their activity and the exudation of organic compounds from them. In natural ecosystems, the linkages between inputs of carbon from plants and microbial activity driven by these inputs are central to our understanding of nutrient cycling in soil and the productivity of these systems. This coupling of plant and microbial productivity is also of increasing importance in agriculture, where the shift towards low-input systems increases the dependence of plant production on nutrient cycling, as opposed to fertilizers. This review considers the processes by which plants can influence the cycling of nutrients in soil, and in particular the importance of organic inputs from roots in driving microbially mediated transformations of N. This coupling of plant inputs to the functioning of the microbial community is beneficial for acquisition of N by plants, particularly in low-input systems. This occurs through stimulation of microbes that produce exoenzymes that degrade organic matter, and by promoting cycling of N immobilized in the microbial biomass via predation by protozoa. Also, plants increase the cycling of N by changes in exudation in response to nitrogen supply around roots, and in response to browsing by herbivores. Plants can release compounds in exudates that directly affect the expression of genes in microbes, and this may be an important way of controlling their function to the benefit of the plant. [source] Accumulation of heterocyclic nitrogen in humified organic matter: a 15N-NMR study of lowland rice soilsEUROPEAN JOURNAL OF SOIL SCIENCE, Issue 3 2000N. Mahieu Summary Recent intensification of cropping and the attendant longer submergence of the soil for lowland rice in tropical Asia appear to have altered the nature of the soil organic matter, and perhaps also nutrient cycling. To identify the dominant forms of organic nitrogen in the soils we extracted the labile mobile humic acid (MHA) and the more recalcitrant calcium humate (CaHA) fractions from soils under several long-term field experiments in the Philippines and analysed them by 15N-nuclear magnetic resonance spectroscopy. Amide N dominated the spectra of all humic acid (HA) samples (60,80% of total peak area). Its proportion of total spectral area increased with increasing intensity of cropping and length of time during which the soil was flooded and was greater in the MHA fraction than in the CaHA fraction. Simultaneously the spectral proportion of free amino N and other chemical shift regions decreased slightly with increasing length of submergence. Heterocyclic N was detected at modest proportions (7,22%) and was more prevalent in more humified samples, especially in the CaHA of aerated soils. Correlations of spectral proportions of heterocyclic N with other properties of the HA, reported elsewhere, were highly significant. Correlations were positive with visible light absorption (r=,0.86) and concentration of free radicals (r=,0.85), both of which are indices of humification, and negative with concentration of H (r=,,0.86), a negative index of humification. Correlations of spectral proportions of amide N with these properties were also highly significant but in each case of opposite sign to that of heterocyclic N. Proportions of heterocyclic N declined with increasing duration of submergence. The results suggest that (i) 15N-NMR can reproducibly measure some portion of heterocyclic N, (ii) formation of heterocyclic N is associated solely with gradual humification occurring over many years, and (iii) the abundant phenols in the submerged rice soils did not promote formation of heterocyclic N, and hence some other process is responsible for a substantial decrease in the availability of native N associated with intensive rice cropping. [source] Freshwater and marine virioplankton: a brief overview of commonalities and differencesFRESHWATER BIOLOGY, Issue 6 2008STEVEN W. WILHELM Summary 1. Viruses are a pervasive component of microbial food webs in both marine and freshwater systems. The abundance of viruses in individual aquatic systems appears to be independent of salinity but related to the biomass of primary and secondary producers as well as seasonal effects. Burst size, virus production rate and the percentage of microbial cells carrying a viral burden also appear to be more closely correlated to trophic status than to salinity. 2. In marine environments, the roles of planktonic viruses as regulators of carbon and nutrient cycling as well as microbial community structure have been a focus of numerous studies, yet the roles of freshwater virioplankton remain much less studied. Nevertheless, a survey of published freshwater studies demonstrates that virioplankton recycle important quantities of growth-limiting nutrients from hosts via generation of dead particulate and dissolved organic matter during cell lysis, and suggests that both the chemical speciation and concentration of these organic compounds and nutrients may have important influences on the microbial community. 3. Parallel observations on the spatial patterns and dynamics of microbial mortality due to viruses or grazing are more advanced in freshwaters than in marine environments. However, the constraints that determine whether virus- or grazer-mediated mortality dominates are not yet understood in either environment. 4. Application of molecular approaches has facilitated the examination of the diversity and ecological dynamics of specific viral populations and entire communities. The depth of detail achieved in marine environments towards characterizing these populations and communities is just beginning to be matched in freshwater systems. The few available data suggest that viruses targeting-related hosts in freshwater and marine systems may be genetically distinct. 5. Although the role of viruses in aquatic systems is complex and remains insufficiently studied, our survey of the literature indicates that, despite some differences, many of the controls on virioplankton activity and diversity are similar in marine and freshwater environments. [source] Taxonomic and regional patterns in benthic macroinvertebrate elemental composition in streamsFRESHWATER BIOLOGY, Issue 11 2005MICHELLE A. EVANS-WHITE Summary 1. Ecological stoichiometry has been used to better understand dynamics in consumer growth and the role of consumer-recycled nutrients because it focuses on more than one element. Most research has focused on pelagic rather than benthic consumers. Variation in elemental composition among benthic consumer taxa would suggest that taxa differ in their susceptibility to nutrient limitation or in their role in recycling nutrients. 2. We collected benthic macroinvertebrates from streams in two regions (Indiana,Michigan and Wisconsin, U.S.A.) to examine taxonomic and regional variation in benthic macroinvertebrate body carbon (C), nitrogen (N), and phosphorus (P) concentrations and ratios. 3. Elemental composition varied little within taxa common to both regions. In contrast, elemental composition differed greatly among taxa and appeared to be related to phylogeny. The elemental composition of macroinvertebrates clustered into three distinct groups: insects, mollusks, and crustaceans. To a lesser extent, insects and mollusks also differed in elemental composition among genera. 4. Functional feeding groups (FFGs) differed in elemental composition, with predators having a higher N content than other groups. Substantial elemental imbalances between C and N were found between most primary consumers and their likely food sources, and the magnitude of the imbalance depended in part on the FFG. 5. Our results support an assumption of most ecological stoichiometry models that, within a species, the elemental composition of aquatic invertebrates is relatively constant. Variation in elemental composition among taxa at various higher taxonomic levels suggests that susceptibility of stream invertebrates to nutrient limitation and their role in nutrient cycling will strongly depend on phylogeny. [source] Diel variation in surface and subsurface microbial activity along a gradient of drying in an Australian sand-bed streamFRESHWATER BIOLOGY, Issue 10 2003Cecile Claret Summary 1. Microbes play key roles in nutrient transformation and organic matter mineralisation in the hyporheic zone but their short-term responses to diel variations in discharge and temperature are unknown. Rates of microbial esterase activity were hypothesised to vary vertically and along a gradient of moisture in a drying sand-bed stream where discharge fluctuated daily in response to evapotranspiration. 2. At ,fully saturated', ,moist' and ,dry' locations in three sites along a drying Australian sand-bed stream, microbial activity at three depths (surface, 10 and 30 cm) was assessed using fluorescein diacetate hydrolysis. Samples were collected in mid-summer in the late afternoon and again at dawn to assess diel variation in hydrolytic activity at each site and depth. Data loggers tracked diel variations in temperature at each depth. 3. Hydrolytic activity was up to 10-fold greater in the surface sediments in late afternoon than at dawn in all habitats, and was correlated with surface sediment temperature. Diel differences in activity were not detected at 10 cm, although daily thermal cycles were evident at this depth. Unexpectedly, activity was marginally higher at dawn at 30 cm in all habitats, perhaps reflecting lags in temperature at that depth. 4. Overall, microbial activity declined with depth, strongly correlated with vertical trends in total organic matter and concentrations of dissolved phosphorus. Particulate organic matter, probably buried during a flood 35 days earlier, appeared largely responsible for these vertical trends. On the other hand, there was little evidence for hydrological exchange between much of the hyporheic zone and the surface stream, implying that processes in the subsurface zone of this stream are effectively isolated during baseflow in mid-summer. 5. Diel cycles of wetting and drying in the moist habitats did not enhance esterase activity relative to the dry or fully saturated habitats. Sediment moisture was not correlated with microbial activity, and mats of senescent algae appeared to inhibit water loss from surface sediments in the moist habitat. In this sand-bed stream, local diel fluctuations in water level appear to have less influence on microbial activity and mineralisation of organic matter in the sediments than occasional floods that bury leaf litter and renew many hyporheic zone functions. Subreach-scale processes seem to be the major driving force of microbial processes and nutrient cycling in this sand-bed river. [source] The effects of Daphnia on nutrient stoichiometry and filamentous cyanobacteria: a mesocosm experiment in a eutrophic lakeFRESHWATER BIOLOGY, Issue 7 2002M. J. PATERSON 1.,Stoichiometric theory predicts that the nitrogen : phosphorus (N : P) ratio of recycled nutrients should increase when P-rich zooplankton such as Daphnia become dominant. We used an enclosure study to test the hypothesis that an increased biomass of Daphnia will increase the relative availability of N versus P sufficiently to decrease the abundance of filamentous cyanobacteria. The experiment was conducted in artificially enriched Lake 227 (L227) in the Experimental Lakes Area (ELA), north-western Ontario, Canada. Previous studies in L227 have shown that the dominance of filamentous, N-fixing cyanobacteria is strongly affected by changes in the relative loading rates of N and P. 2.,We used a 2 × 2 factorial design with the addition or absence of D. pulicaria and high or low relative loading rates of N and P (+NH4, ,NH4) in small enclosures as treatment variables. If Daphnia can strongly affect filamentous cyanobacteria by altering N and P availability, these impacts should be greatest with low external N : P loading rates. The phytoplankton community of L227 was predominantly composed of filamentous Aphanizomenon spp. at the start of the experiment. 3.,Daphnia strongly reduced filamentous cyanobacterial density in all enclosures to which they were added. The addition of NH4 had only a small impact on algal community composition. Hence, we conclude that Daphnia did not cause reductions in cyanobacteria by altering the N : P ratio of available nutrients. 4.,Despite the lack of evidence that Daphnia affected filamentous cyanobacteria by altering the relative availability of N and P, we found changes in nutrient cycling consistent with other aspects of stoichiometric theory. In the presence of Daphnia, total P in the water column decreased because of an increase in P sedimentation. In contrast to P, a decrease in suspended particulate N was offset by an increase in dissolved N (especially NH4). Hence, dissolved and total N : P ratios in the water column increased with Daphnia as a result of differences in the fate of suspended particulate N versus P. There was minimal accumulation and storage of P in Daphnia biomass in the enclosures. 5.,Our experiment demonstrated that Daphnia can strongly limit filamentous cyanobacterial abundance and affect the biogeochemical cycling of nutrients. In our study, changes in nutrient cycling were apparently insufficient to cause the changes in phytoplankton community composition that we observed. Daphnia therefore limited filamentous cyanobacteria by other mechanisms. [source] Alkaloids may not be responsible for endophyte-associated reductions in tall fescue decomposition ratesFUNCTIONAL ECOLOGY, Issue 2 2010Jacob A. Siegrist Summary 1. ,Fungal endophyte , grass symbioses can have dramatic ecological effects, altering individual plant physiology, plant and animal community structure and function, and ecosystem processes such as litter decomposition and nutrient cycling. 2. ,Within the tall fescue (Schedonorus arundinaceus) , fungal endophyte (Neotyphodium coenophialum) symbiosis, fungal produced alkaloids are often invoked as the putative mechanism driving these ecological responses. Yet few measurements of alkaloids exist in the ecological literature. In this study, we quantified alkaloid levels in live, standing dead and decomposing endophyte-infected (E+) and ,free (E,) plant material and simultaneously evaluated the direct and indirect effects of endophyte presence on tall fescue decomposition. 3. ,Loline and ergot alkaloid levels were consistently high in live E+ (common toxic strain of N. coenophialum) tall fescue biomass throughout the sampling period (May,November 2007), whereas, E, live and standing dead material had non-detectable alkaloid concentrations. Standing dead E+ biomass had significantly reduced alkaloid levels (6,19x lower than the levels measured in the corresponding live E+ biomass) that were equivalent to E, live and dead for loline but were still somewhat higher than E, material for ergots. 4. ,In an effort to test the role of alkaloids in directly inhibiting decomposition, as has been suggested by previous studies, we conducted a litter bag experiment using green, alkaloid-laden E+ and alkaloid-free E, tall fescue plant material. We incubated E+ and E, litter bags in both E+ and E, tall fescue stands for 170 days, and measured mass loss, carbon and nitrogen content, and ergot and loline alkaloid concentrations over the incubation period. 5. ,Consistent with previous reports, both direct and indirect effects of endophyte presence on litter decomposition were observed: endophyte presence in the litter and surrounding microenvironment significantly reduced decomposition rates. Surprisingly, despite large differences in alkaloid content between E+ and E, litter from Day 0,Day 21 of the incubation, direct effects of the endophyte on litter decomposition, while significant, were relatively small (differences in mass loss between E+ and E, litter were never >3%). Alkaloids were gone from E+ material by day 56. 6. ,We propose that results from this study indicating alkaloids are largely absent in standing dead material (the typical input to the decomposition process), and that despite being present in our litter bag experiment, failed to produce large differences in mass loss between E+ and E, material questions the supposition that fungal produced alkaloids directly inhibit decomposition. Additional studies exploring the mechanisms behind the direct and indirect effects of endophytes on this ecosystem process are needed. [source] Modelling approach to analyse the effects of nitrification inhibition on primary productionFUNCTIONAL ECOLOGY, Issue 1 2009S. Boudsocq Summary 1Wet tropical savannas have high grass productivity despite the fact that nitrogen is generally limiting for primary production and soil nutrient content is typically very low. Nitrogen recycling, and especially nitrification, is supposed to be a strong determinant of the balance between conservation and loss of nutrients at the ecosystem level. The important primary production observed in wet tropical savannas might be due to a tight nutrient cycling and the fact that some grass species inhibit soil nitrification. 2Using a general theoretical ecosystem model taking both nitrate and ammonium into account, we investigate analytically, using a four,compartment-differential-equation system the general conditions under which nitrification inhibition enhances primary production. We then estimate the quantitative impact of such a mechanism on the dynamics and budget of nitrogen in a well-documented ecosystem, the Lamto savanna (Ivory Coast). This ecosystem is dominated by the grass Hyparrhenia diplandra, which drastically reduces nitrification in the whole savanna except for a small zone. While this small zone supports a lower grass primary production, nitrification is higher, most likely due to the presence of another genotype of H. diplandra, which has no effect on nitrification processes. Ultimately, we test whether differences in nitrification fluxes can alone explain this variation in primary production. 3Model analysis shows that nitrification inhibition enhances primary production only if the recycling efficiency , that is, the fraction of nitrogen passing through a compartment that stays inside the ecosystem , of ammonium is higher than the recycling efficiency of nitrate. This condition probably manifests itself in most soils as ammonium is less mobile than nitrate and is not touched by denitrification. It also depends partially on the relative affinity of plants for ammonium or nitrate. The numerical predictions for this model in the Lamto savanna show that variations in nitrification inhibition capacity may explain observed differences in primary production. 4In conclusion we find that nitrification inhibition is a process which probably enhances ecosystem fertility in a sustainable way, particularly in situations of high nitrate leaching and denitrification fluxes. This mechanism could explain the ecological advantage exhibited by native African grasses over indigenous grasses in South-American pastures. [source] Drought changes phosphorus and potassium accumulation patterns in an evergreen Mediterranean forestFUNCTIONAL ECOLOGY, Issue 2 2007J. SARDANS Summary 1Climate models predict more extreme weather in Mediterranean ecosystems, with more frequent drought periods and torrential rainfall. These expected changes may affect major process in ecosystems such as mineral cycling. However, there is a lack of experimental data regarding the effects of prolonged drought on nutrient cycling and content in Mediterranean ecosystems. 2A 6-year drought manipulation experiment was conducted in a Quercus ilex Mediterranean forest. The aim was to investigate the effects of drought conditions expected to occur over the coming decades, on the contents and concentrations of phosphorus (P) and potassium (K) in stand biomass, and P and K content and availability in soils. 3Drought (an average reduction of 15% in soil moisture) increased P leaf concentration by 18·2% and reduced P wood and root concentrations (30·9% and 39·8%, respectively) in the dominant tree species Quercus ilex, suggesting a process of mobilization of P from wood towards leaves. The decrease in P wood concentrations in Quercus ilex, together with a decrease in forest biomass growth, led to an overall decrease (by approximately one-third) of the total P content in above-ground biomass. In control plots, the total P content in the above-ground biomass increased 54 kg ha,1 from 1999 to 2005, whereas in drought plots there was no increase in P levels in above-ground biomass. Drought had no effects on either K above-ground contents or concentrations. 4Drought increased total soil soluble P by increasing soil soluble organic P, which is the soil soluble P not directly available to plant capture. Drought reduced the ratio of soil soluble inorganic P : soil soluble organic P by 50% showing a decrease of inorganic P release from P bound to organic matter. Drought increased by 10% the total K content in the soil, but reduced the soil soluble K by 20·4%. 5Drought led to diminished plant uptake of mineral nutrients and to greater recalcitrance of minerals in soil. This will lead to a reduction in P and K in the ecosystem, due to losses in P and K through leaching and erosion, if the heavy rainfalls predicted by IPCC (Intergovernmental Panel on Climate Change) models occur. As P is currently a limiting factor in many Mediterranean terrestrial ecosystems, and given that P and K are necessary for high water-use efficiency and stomata control, the negative effects of drought on P and K content in the ecosystem may well have additional indirect negative effects on plant fitness. [source] Nutrient cycling efficiency explains the long-term effect of ecosystem engineers on primary productionFUNCTIONAL ECOLOGY, Issue 1 2007SÉBASTIEN BAROT Summary 1Soil organisms, such as earthworms, accelerate mineralization of soil organic matter and are thought to be beneficial for plant growth. This has been shown in short-term microcosm experiments. It is thus legitimate to ask whether these increases in plant growth are due to brief pulses of mineralization or whether these increases are long-lasting. 2This question was addressed using a system of differential equations modelling the effects of decomposers on nutrient cycling via trophic (nutrient assimilation) and nontrophic effects (through their ecosystem engineering activities). 3The analytical study of this model showed that these processes increase primary production in the long term when they recycle nutrients efficiently, allowing a small fraction of the recycled nutrients to be leached out of the ecosystem. 4Mineralization by the ecosystem engineering activities of decomposers seems to deprive them of a resource. However, it was shown that a decomposer may increase its own biomass, through its ecosystem engineering activities, provided the created recycling loop is efficient enough. 5Mechanisms through which earthworms may modify the efficiency of nutrient cycling are discussed. The necessity of measuring the effect of earthworms on the nutrient input,output balance of ecosystems under field conditions is emphasized. [source] Climate change in the Arctic: using plant functional types in a meta-analysis of field experimentsFUNCTIONAL ECOLOGY, Issue 1 2002C. F. Dormann Summary 1,The effects of global climate change are predicted to be strongest in the Arctic. This, as well as the suitability of tundra as a simple model ecosystem, has led to many field experiments investigating consequences of simulated environmental change. 2,On the basis of 36 experiments reviewed here, minor light attenuation by clouds, small changes in precipitation, and increases in UV-B radiation and atmospheric CO2 concentrations will not affect arctic plants in the short term. However, temperature elevation, increases in nutrient availability and major decreases in light availability will cause an immediate plant-growth response and alter nutrient cycling, possibly creating positive feedbacks on plant biomass. The driver of future change in arctic vegetation is likely to be increased nutrient availability, arising for example from temperature-induced increases in mineralization. 3,Arctic plant species differ widely in their response to environmental manipulations. Classification into plant functional types proved largely unsatisfactory for generalization of responses and predictions of effects. 4,Nevertheless, a few generalizations and consistent differences between PFTs were detected. Responses to fertilization were the strongest, particularly in grasses. Shrubs and grasses were most responsive to elevated temperature. 5,Future studies should focus on interactive effects of environmental factors, investigate long-term responses to manipulations, and incorporate interactions with other trophic levels. With respect to plant functional types, a new approach is advocated, which groups species according to their responses to environmental manipulations. [source] Hyperspectral Remote Sensing of VegetationGEOGRAPHY COMPASS (ELECTRONIC), Issue 6 2008Jungho Im Hyperspectral analysis of vegetation involves obtaining spectral reflectance measurements in hundreds of bands in the electromagnetic spectrum. These measurements may be obtained using hand-held spectroradiometers or hyperspectral remote sensing instruments placed onboard aircraft or satellites. Hyperspectral remote sensing provides valuable information about vegetation type, leaf area index, biomass, chlorophyll, and leaf nutrient concentration which are used to understand ecosystem functions, vegetation growth, and nutrient cycling. This article first reviews hyperspectral remote sensing and then describes current modeling and classification techniques used to estimate and predict vegetation type and biophysical characteristics. [source] Moisture availability influences the effect of ultraviolet-B radiation on leaf litter decompositionGLOBAL CHANGE BIOLOGY, Issue 1 2010W. KOLBY SMITH Abstract Altered surface ultraviolet-B (UV-B) radiation resulting from a combination of factors that include changes in stratospheric ozone concentrations, cloud cover, and aerosol conditions may affect litter decomposition and, thus, terrestrial nutrient cycling on a global scale. Although litter decomposition rates vary across biomes, patterns of decomposition suggest that UV-B radiation accelerates litter decay in xeric environments where precipitation is infrequent. However, under more frequent precipitation regimes where litter decay rates are characteristically high, the effect of UV-B radiation on litter decomposition has not been fully elucidated. To evaluate this association between moisture regime and UV-B exposure, a litter decomposition experiment was designed for aspen (Populus tremuloides) leaf litter, where conditions that influence both abiotic (photodegradation) and biotic (microbial) processes could be manipulated quantitatively. We found that experimentally increasing UV-B exposure (0, 7.4, and 11.2 kJ m,2 day,1, respectively) did not consistently increase litter decomposition rates across simulated precipitation frequencies of 4, 12, and 24 days. Instead, a UV-B exposure of 11.2 kJ m,2 day,1 resulted in a 13% decrease in decomposition rates under the 4-day precipitation frequency, but an increase of 80% under the 24-day frequency. Furthermore, the same UV-B dose increased litter decomposition rates under the 24-day precipitation frequency by 78% even in conditions where microbial activity was suppressed. Therefore, under more xeric conditions, greater exposure to UV-B radiation increased decomposition rates, presumably through photodegradation. In contrast, when decomposition was not moisture-limited, greater UV-B exposure slowed decomposition rates, most likely from the resulting inhibition of microbial activity. Ultimately, these experimental results highlight UV-B radiation as a potential driver of decomposition, as well as indicate that both the direction and magnitude of the UV-B effect is dependent on moisture availability, a factor that may change according to future patterns in global precipitation. [source] Effects of nutrient loading and extreme rainfall events on coastal tallgrass prairies: invasion intensity, vegetation responses, and carbon and nitrogen distributionGLOBAL CHANGE BIOLOGY, Issue 10 2007EVAN SIEMANN Abstract Soil fertility and precipitation are major factors regulating transitions from grasslands to forests. Biotic regulation may influence the effects of these abiotic drivers. In this study, we examined the effects of extreme rainfall events, anthropogenic nutrient loading and insect herbivory on the ability of Chinese tallow tree (Sapium sebiferum) to invade coastal prairie to determine how these factors may influence woody invasion of a grassland. We manipulated soil fertility (NPK addition) and simulated variation in frequency of extreme rainfall events in a three growing season, full factorial field experiment. Adding water to or pumping water out of plots simulated increased and decreased rainfall frequencies. We added Sapium seeds and seedlings to each plot and manipulated insect herbivory on transplanted Sapium seedlings with insecticide. We measured soil moisture, Sapium performance, vegetation mass, and carbon and nitrogen in vegetation and soils (0,10 cm deep, 10,20 cm deep). Fertilization increased Sapium invasion intensity by increasing seedling survival, height growth and biomass. Insect damage was low and insect suppression had little effect in all conditions. Recruitment of Sapium from seed was very low and independent of treatments. Vegetation mass was increased by fertilization in both rainfall treatments but not in the ambient moisture treatment. The amount of carbon and nitrogen in plants was increased by fertilization, especially in modified moisture plots. Soil carbon and nitrogen were independent of all treatments. These results suggest that coastal tallgrass prairies are more likely to be impacted by nutrient loading, in terms of invasion severity and nutrient cycling, than by changes in the frequency of extreme rainfall events. [source] Effects of wildfire and permafrost on soil organic matter and soil climate in interior AlaskaGLOBAL CHANGE BIOLOGY, Issue 12 2006JENNIFER W. HARDEN Abstract The influence of discontinuous permafrost on ground-fuel storage, combustion losses, and postfire soil climates was examined after a wildfire near Delta Junction, AK in July 1999. At this site, we sampled soils from a four-way site comparison of burning (burned and unburned) and permafrost (permafrost and nonpermafrost). Soil organic layers (which comprise ground-fuel storage) were thicker in permafrost than nonpermafrost soils both in burned and unburned sites. While we expected fire severity to be greater in the drier site (without permafrost), combustion losses were not significantly different between the two burned sites. Overall, permafrost and burning had significant effects on physical soil variables. Most notably, unburned permafrost sites with the thickest organic mats consistently had the coldest temperatures and wettest mineral soil, while soils in the burned nonpermafrost sites were warmer and drier than the other soils. For every centimeter of organic mat thickness, temperature at 5 cm depth was about 0.5°C cooler during summer months. We propose that organic soil layers determine to a large extent the physical and thermal setting for variations in vegetation, decomposition, and carbon balance across these landscapes. In particular, the deep organic layers maintain the legacies of thermal and nutrient cycling governed by fire and revegetation. We further propose that the thermal influence of deep organic soil layers may be an underlying mechanism responsible for large regional patterns of burning and regrowth, detected in fractal analyses of burn frequency and area. Thus, fractal geometry can potentially be used to analyze changes in state of these fire prone systems. [source] Interactive effects of elevated CO2, N deposition and climate change on extracellular enzyme activity and soil density fractionation in a California annual grasslandGLOBAL CHANGE BIOLOGY, Issue 10 2005Hugh A. L. Henry Abstract Elevated CO2, N deposition and climate change can alter ecosystem-level nutrient cycling both directly and indirectly. We explored the interactive effects of these environmental changes on extracellular enzyme activity and organic matter fractionation in soils of a California annual grassland. The activities of hydrolases (polysaccharide-degrading enzymes and phosphatase) increased significantly in response to nitrate addition, which coincided with an increase in soluble C concentrations under ambient CO2. Water addition and elevated CO2 had negative but nonadditive effects on the activities of these enzymes. In contrast, water addition resulted in an increase in the activities of lignin-degrading enzymes (phenol oxidase and peroxidase), and a decrease in the free light fraction (FLF) of soil organic matter. Independent of treatment effects, lignin content in the FLF was negatively correlated with the quantity of FLF across all samples. Lignin concentrations were lower in the aggregate-occluded light fraction (OLF) than the FLF, and there was no correlation between percent lignin and OLF quantity, which was consistent with the protection of soil organic matter in aggregates. Elevated CO2 decreased the quantity of OLF and increased the OLF lignin concentration, however, which is consistent with increased degradation resulting from increased turnover of soil aggregates. Overall, these results suggest that the effects of N addition on hydrolase activity are offset by the interactive effects of water addition and elevated CO2, whereas water and elevated CO2 may cause an increase in the breakdown of soil organic matter as a result of their effects on lignin-degrading enzymes and soil aggregation, respectively. [source] Vegetation responses in Alaskan arctic tundra after 8 years of a summer warming and winter snow manipulation experimentGLOBAL CHANGE BIOLOGY, Issue 4 2005C.-H. A. Wahren Abstract We used snow fences and small (1 m2) open-topped fiberglass chambers (OTCs) to study the effects of changes in winter snow cover and summer air temperatures on arctic tundra. In 1994, two 60 m long, 2.8 m high snow fences, one in moist and the other in dry tundra, were erected at Toolik Lake, Alaska. OTCs paired with unwarmed plots, were placed along each experimental snow gradient and in control areas adjacent to the snowdrifts. After 8 years, the vegetation of the two sites, including that in control plots, had changed significantly. At both sites, the cover of shrubs, live vegetation, and litter, together with canopy height, had all increased, while lichen cover and diversity had decreased. At the moist site, bryophytes decreased in cover, while an increase in graminoids was almost entirely because of the response of the sedge Eriophorum vaginatum. These community changes were consistent with results found in studies of responses to warming and increased nutrient availability in the Arctic. However, during the time period of the experiment, summer temperature did not increase, but summer precipitation increased by 28%. The snow addition treatment affected species abundance, canopy height, and diversity, whereas the summer warming treatment had few measurable effects on vegetation. The interannual temperature fluctuation was considerably larger than the temperature increases within OTCs (<2°C), however. Snow addition also had a greater effect on microclimate by insulating vegetation from winter wind and temperature extremes, modifying winter soil temperatures, and increasing spring run-off. Most increases in shrub cover and canopy height occurred in the medium snow-depth zone (0.5,2 m) of the moist site, and the medium to deep snow-depth zone (2,3 m) of the dry site. At the moist tundra site, deciduous shrubs, particularly Betula nana, increased in cover, while evergreen shrubs decreased. These differential responses were likely because of the larger production to biomass ratio in deciduous shrubs, combined with their more flexible growth response under changing environmental conditions. At the dry site, where deciduous shrubs were a minor part of the vegetation, evergreen shrubs increased in both cover and canopy height. These changes in abundance of functional groups are expected to affect most ecological processes, particularly the rate of litter decomposition, nutrient cycling, and both soil carbon and nitrogen pools. Also, changes in canopy structure, associated with increases in shrub abundance, are expected to alter the summer energy balance by increasing net radiation and evapotranspiration, thus altering soil moisture regimes. [source] Functional roles of remnant plant populations in communities and ecosystemsGLOBAL ECOLOGY, Issue 6 2000Ove Eriksson Abstract A hypothesis is suggested for functional roles of remnant plant populations in communities and ecosystems. A remnant population is capable of persistence during extended time periods, despite a negative population growth rate, due to long-lived life stages and life-cycles, including loops that allow population persistence without completion of the whole life cycle. A list of critera is suggested to help identification of remnant plant populations. Several community and ecosystem features may result from the presence of remnant plant populations. Apart from increasing community and ecosystem resilience just by being present, remnant populations may contribute to resilience through enhancing colonization by other plant species, by providing a persistent habitat for assemblages of animals and microorganisms, and by reducing variation in nutrient cycling. It is suggested that the common ability of plants to develop remnant populations is a contributing factor to ecosystem stability. Remnant populations are important for the capacity of ecosystems to cope with the present-day impact caused by human society, and their occurrence should be recognized in surveys of threatened plant species and communities. [source] Changes in hydrology and erosion over a transition from grassland to shrublandHYDROLOGICAL PROCESSES, Issue 4 2010Laura Turnbull Abstract The degradation of grasslands is a common problem across semi-arid areas worldwide. Over the last 150 years, much of the south-western United States has experienced significant land degradation, with desert grasslands becoming dominated by shrubs and concurrent changes in runoff and erosion which are thought to propagate further the process of degradation. Plot-based experiments to determine how spatio-temporal characteristics of soil moisture, runoff and erosion change over a transition from grassland to shrubland were carried out at four sites over a transition from black grama (Bouteloua eriopoda) grassland to creosotebush (Larrea tridentata) shrubland at the Sevilleta NWR LTER site in New Mexico. Each site consisted of a 10 × 30 m bounded runoff plot and adjacent characterization plots with nested sampling points where soil moisture content was measured. Results show distinct spatio-temporal variations in soil moisture content, which are due to the net effect of processes operating at multiple spatial and temporal scales, such as plant uptake of water at local scales versus the redistribution of water during runoff events at the hillslope scale. There is an overall increase in runoff and erosion over the transition from grassland to shrubland, which is likely to be associated with an increase in connectivity of bare, runoff-generating areas, although these increases do not appear to follow a linear trajectory. Erosion rates increased over the transition from grassland to shrubland, likely related in part to changes in runoff characteristics and the increased capacity of the runoff to detach, entrain and transport sediment. Over all plots, fine material was preferentially eroded which has potential implications for nutrient cycling since nutrients tend to be associated with fine sediment. Copyright © 2009 John Wiley & Sons, Ltd. [source] Water uptake and nutrient concentrations under a floodplain oak savanna during a non-flood period, lower Cedar River, Iowa,HYDROLOGICAL PROCESSES, Issue 21 2009Keith E. Schilling Abstract Floodplains during non-flood periods are less well documented than when flooding occurs, but non-flood periods offer opportunities to investigate vegetation controls on water and nutrient cycling. In this study, we characterized water uptake and nutrient concentration patterns from 2005 to 2007 under an oak savanna located on the floodplain of the Cedar River in Muscatine County, Iowa. The water table ranged from 0·5 to 2·5 m below ground surface and fluctuated in response to stream stage, plant water demand and rainfall inputs. Applying the White method to diurnal water table fluctuations, daily ET from groundwater averaged more than 3·5 mm/day in June and July and approximately 2 mm/day in May and August. Total annual ET averaged 404 mm for a growing season from mid-May to mid-October. Savanna groundwater concentrations of nitrate-N, ammonium-N, and phosphate-P were very low (mean <0·18, <0·14, <0·08 mg/l, respectively), whereas DOC concentrations were high (7·1 mg/l). Low concentrations of N and P were in contrast to high nutrient concentrations in the nearby Cedar River, where N and P averaged 7·5 mg/l and 0·13, respectively. In regions dominated by intensive agriculture, study results document valuable ecosystem services for native floodplain ecosystems in reducing watershed-scale nutrient losses and providing an oasis for biological complexity. Improved understanding of the environmental conditions of regionally significant habitats, including major controls on water table elevations and water quality, offers promise for better management aimed at preserving the ecology of these important habitats. Copyright © 2009 John Wiley & Sons, Ltd. [source] The dynamics of unattached benthic macroalgal accumulations in the Swan,Canning EstuaryHYDROLOGICAL PROCESSES, Issue 13 2001Helen Astill Abstract It has been suggested that macroalgal accumulations may impact on benthic nutrient cycling by promoting remineralization of sedimentary nutrients, otherwise inaccessible, and act as sinks/sources for dissolved nutrients in the water column. However, little consideration has been given to the time taken for these impacts to occur, and if accumulations persist long enough in a region for impacts to occur. In this study, accumulations were characterized seasonally, according to biomass, height relative to water depth, and organic content of the underlying sediment, from November 1996 to August 1997, in the Swan,Canning Estuary. Persistence of accumulations was measured from late summer to mid-winter in 1997, by tagging individual plants and recording the time tagged plants persisted at 10 sites. In summer 1998, physicochemical profiles of accumulations were measured over 24 h, at two locations: one with relatively low sediment organic content (SOCn) (1·5% LOI) and one with relatively high SOC (6% LOI). Accumulations rarely exceeded 25 cm in height, regardless of water column depth, and ranged between 100 and 500 g dwt m,2. Macroalgae persisted between one week, in relatively well-flushed regions, to one month in areas with poor flushing. Over the entire diurnal period, almost 100% of incident light was attenuated at the bottom of all accumulations. Dissolved oxygen levels at the bottom of accumulations were generally depressed, particularly at night, with hypoxia (1 mg l,1) recorded at the high SOC site at 03 : 00 h. No significant differences in FRP concentrations (approximately 30,60 µg l,1) were recorded between sites, or within accumulation profiles. Ammonium levels were greatly raised inside accumulations at the high SOC site by 03 : 00 h (10 and 300 µg l,1, inside and outside, respectively). The results show that, where SOC is high, conditions within accumulations are affected. Impacts occurred within 24 h; well within the period for which accumulations persist. These results also indicate that regulation of hydrological regimes in estuarine systems may result in increased persistence of macroalgal accumulations, and associated water quality problems. Copyright © 2001 John Wiley & Sons, Ltd. [source] | |||||||||||||||||||