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Log Phase (log + phase)
Selected AbstractsCoevolution of antibiotic production and counter-resistance in soil bacteriaENVIRONMENTAL MICROBIOLOGY, Issue 3 2010Paris Laskaris Summary We present evidence for the coexistence and coevolution of antibiotic resistance and biosynthesis genes in soil bacteria. The distribution of the streptomycin (strA) and viomycin (vph) resistance genes was examined in Streptomyces isolates. strA and vph were found either within a biosynthetic gene cluster or independently. Streptomyces griseus strains possessing the streptomycin cluster formed part of a clonal complex. All S. griseus strains possessing solely strA belonged to two clades; both were closely related to the streptomycin producers. Other more distantly related S. griseus strains did not contain strA. S. griseus strains with only vph also formed two clades, but they were more distantly related to the producers and to one another. The expression of the strA gene was constitutive in a resistance-only strain whereas streptomycin producers showed peak strA expression in late log phase that correlates with the switch on of streptomycin biosynthesis. While there is evidence that antibiotics have diverse roles in nature, our data clearly support the coevolution of resistance in the presence of antibiotic biosynthetic capability within closely related soil dwelling bacteria. This reinforces the view that, for some antibiotics at least, the primary role is one of antibiosis during competition in soil for resources. [source] A novel gene, ecl1+, extends the chronological lifespan in fission yeastFEMS YEAST RESEARCH, Issue 4 2008Hokuto Ohtsuka Abstract We have identified a novel gene from Schizosaccharomyces pombe that we have named ecl1+ (extender of the chronological lifespan). When ecl1+ is provided on a high-copy number plasmid, it extends the viability of both the ,sty1 MAP kinase mutant and the wild-type cells after entry into the stationary phase. ecl1+ encodes an 80-amino acid polypeptide that had not been annotated in the current database. The ecl1+ -mRNA increases transiently when the growth phase is changed from the log phase to the stationary phase. The Ecl1 protein is localized in the nucleus. Calorie restriction extends the chronological lifespan of wild-type and ,ecl1 cells but not ecl1+ -overproducing cells. The ,pka1 mutant shows little, if any, additional extension of viability when Ecl1 is overproduced. The ste11+ gene that is negatively controlled by Pka1 is up regulated when Ecl1 is overproduced. From these results we propose that the effect of Ecl1 overproduction may be mainly linked to and negatively affects the Pka1-dependent pathway. [source] Two proteins, YfiA and YhbH, associated with resting ribosomes in stationary phase Escherichia coliGENES TO CELLS, Issue 12 2000Yasushi Maki Ribosomes in Escherichia coli change their composition and conformation in the stationary phase. Ribosome modulation factor (RMF) and ribosomal protein S22 are known to be associated with stationary phase ribosomes. RMF association causes the loss of translational activity and the dimerization of 70S ribosomes into 100S ribosomes, which may increase cell survival in the stationary phase. Two weakly acidic proteins having related amino acid sequences were found to be associated with E. coli ribosomes in the stationary phase. These proteins are the products of ORFs named yfiA and yhbH. The sum of the copy numbers of their product proteins, YfiA and YhbH, in the ribosomal particles was low in the log phase, but increased to nearly one in the stationary phase. YfiA was found in the 70S ribosomal fraction rather than the 100S. On the other hand, YhbH was detected exclusively in the 100S ribosomal fraction. When the stationary phase cells were transferred to fresh medium, YfiA and YhbH were found in the 70S ribosomal fraction, but not in the polysome fraction. Two proteins, YfiA and YhbH, associated with E. coli ribosomes were found to accumulate in the stationary phase, leading to the formation of several types of ribosomes. They are not likely to have roles in the elongation step of the translation in log phase cells, but are likely to be involved in the stabilization and preservation of ribosomes in the stationary phase, which might be necessary for cell survival. [source] PRELIMINARY ANALYSIS OF QUANTITATIVE GENETICS AND PHENOTYPIC PLASTICITY IN AULACOSEIRA SUBARCTICA (BACILLAR-IOPHYTA)JOURNAL OF PHYCOLOGY, Issue 2000S. M. Edgar Several clones of Aulacoseira subarctica were isolated from Yellowstone, Lewis, and East Rosebud Lakes (Montana, Wyoming). Two to four clones from each lake were grown in batch cultures under three light intensities, 2, 11.4 and 115 ,E m,2 s,1. Clones were conditioned to their light environment for a three-week period. Inoculants from the conditioned clones taken during log phase of growth, were grown until in log phase, then samples were collected. Five randomly chosen valves for 2 replicates of each clone were examined using a scanning electron microscope and captured on film at a magnification of 20,000x. Each image was digitized and quantitative morphometric characters were measured. A preliminary quantitative genetic analysis was performed on selected characters within each light environment. Plasticity of characters within clones across the three light regimes were also examined. The amount of variability found within characters in A. subarctica will be discussed in terms of environmental, genetic, and microenvironmental sources. [source] Effects of feeding and induction strategy on the production of BmR1 antigen in recombinant E. coliLETTERS IN APPLIED MICROBIOLOGY, Issue 5 2009A. Norsyahida Abstract Aim:, To investigate the effects of feeding and induction strategies on the production of BmR1 recombinant antigen. Methods and Results:, Fed-batch fermentation was studied with respect to the specific growth rate and mode of induction to assess the growth potential of the bacteria in a bioreactor and to produce high yield of BmR1 recombinant antigen. Cells were grown at a controlled specific growth rate (,set) during pre-induction, followed by constant feeding postinduction. The highest biomass (24·3 g l,1) was obtained during fed-batch process operated at ,set of 0·15 h,1, whereby lower ,set (0·075 h,1) gave the highest protein production (9·82 mg l,1). The yield of BmR1 was increased by 1·2-fold upon induction with 1 mmol l,1 IPTG (isopropyl-,- d -thiogalactoside) compared to using 5 mmol l,1 and showed a further 3·5-fold increase when the culture was induced twice at the late log phase. Conclusions:, Combination of feeding at a lower ,set and twice induction with 1 mmol l,1 IPTG yielded the best result of all variables tested, promising an improved method for BmR1 production. Significance and Impact of the Study:, This method can be used to increase the production scale of the BmR1 recombinant antigen to meet the increasing demand for Brugia RapidÔ, a commercial diagnostic test for detection of brugian filariasis. [source] Heterologous Protein Production from the Inducible MET25 Promoter in Saccharomyces cerevisiaeBIOTECHNOLOGY PROGRESS, Issue 2 2005Steven P. Solow Heterologous protein production late in Saccharomyces cerevisiae fermentations is often desirable because it may help avoid the unintentional selection of more rapidly growing, non-protein-expressing cells or allow for the expression of toxic proteins. Here, we describe the use of the MET25 promoter for the production of human serum albumin (HSA) and HSA-fusion proteins in S. cerevisiae. In media lacking methionine, the MET25 promoter yielded high expression levels of HSA and HSA fused to human glucagon, human growth hormone, human interferon ,, and human interleukin-2. More importantly, we have shown that this system can be used to delay heterologous protein production until late log phase of the growth of the culture and does not require the addition of an exogenous inducer. [source] Determination of intracellular efficacies of azithromycin against Leishmania major infection in human neutrophils in vitroCELL BIOCHEMISTRY AND FUNCTION, Issue 1 2003Mehmet Tanyuksel Abstract Azithromycin is one of a new class of antibiotics known as azalides. Azithromycin has high tissue affinity and this feature is thought to be due to the presence of two basic tertiary amine groups. Leishmania major, one of the causative agents of cutaneous leishmaniosis, is an obligate intracellular parasite. In this in vitro study, the potential anti-leishmanial effect of azithromycin upon intracellular forms namely the amastigote of L. major in mice peritoneal macrophages was investigated. L. major promastigotes were propagated in RPMI-1640 supplemented with 20% fetal calf serum in the log phase. The percentage of phagocytosis and microbiacidal activity of azithromycin on macrophages was assessed in the control and study groups by fluorescence microscopy, using acridine orange. Our results showed that at all the concentrations used (0.05, 0.1, 0.3, 0.6,,g,ml,1) azithromycin had no inhibitory effect on the phagocytic capacity of mouse peritoneal macrophages. Although no significant difference was observed for leishmaniacidal activity between the study and the control groups at a concentration of 0.05,,g,ml,1 (p>0.05), a significant (p<0.05) increase in leishmaniacidal activity was detected at 0.1, 0.3 and 0.6,,g,ml,1. As a result, azithromycin does not provide any contribution to the phagocytosis of L. major promastigotes in macrophages in vitro, but it increases the intracellular killing rates of amastigotes. These results suggest that it has a potential anti-leishmanial effect, and may provide a significant advantage in the treatment of the disease. Copyright © 2002 John Wiley & Sons, Ltd. [source] Microcalorimetric studies on influence of Sm3+, Dy3+ on growth and sporulation of Bacillus thuringiensisCHINESE JOURNAL OF CHEMISTRY, Issue 12 2004Ru-Ming Zhao Abstract By using an LKB-2277 Bioactivity Monitor and cycle-flow method, the thermogenic curves of aerobic growth for Bacillus thuringiensis cry II strain at 28 °C have been obtained. The metabolic thermogenic curves of Bt cry II contain two distinct parts: the first part reflects the changes of bacterial growth phase and the second part corresponds to sporulation phase. From these thermogenic curves in the absence or presence of Sm3+, Dy3+ ions, the thermokinetic parameters such as the growth rate constants k, the interval time ,I, the maximum power PMAX1 and heat-output QLOG for log phase, the maximum power PMAX2 and heat-output QSTAT for stationary phase, the heat-output QSPOR for sporulation phase and total heat effects QT were calculated. Sm3+ and Dy3+ ions have promoting action on the growth of Bt cry II in their lower concentration range, on the other hand, they have inhibitory action on the sporulation of Bt in their higher concentration range. It has also been found that the effects of Sm3+ and Dy3+ ions on Br firing the sporulation phase were far greater than those during the bacterial growth phase. It was concluded that the application of Bt for controlling insecticide could not be affected by the presence of the rare-earth elements in the environmental ecosystem. [source] | ||||||||||