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Incomplete Sampling (incomplete + sampling)
Selected AbstractsImpacts of land use change on South-east Asian forest butterflies: a reviewJOURNAL OF APPLIED ECOLOGY, Issue 4 2007LIAN PIN KOH Summary 1South-east Asia has the highest relative rate of habitat loss and degradation in the humid tropics. The responses of less ,charismatic' groups, including butterflies, to habitat disturbance remain relatively poorly understood. Many South-east Asian butterflies are endemic to the region and face global extinction if current levels of deforestation were to continue. 2Here, I highlight South-east Asia as a region urgently in need of butterfly conservation research and review empirical studies of the responses of South-east Asian butterflies to land use change. Additionally, I discuss some methodological pitfalls for such studies. Furthermore, I argue for the importance of identifying the ecological correlates of sensitivity of butterfly species to forest modification and the potential biological mechanisms underlying their responses to land use change. 3There has been no consensus among previous studies on the effects of land use change on butterfly communities in South-east Asia. Of the 20 studies I reviewed, seven reported higher species richness/diversity in undisturbed (or the least disturbed) forest than in disturbed habitats, nine reported the opposite trend, three reported no difference and one reported a strong influence of seasonality on the impacts of logging. 4Some of these studies may contain inherent methodological biases resulting from the failure to control for sampling effects, the lack of consideration for the spatial scale of analysis and incomplete sampling of the vertical strata in tropical rainforests. 5Synthesis and applications. Empirical studies of the effects of land use change on tropical forest insects are sorely lacking from South-east Asia. Butterflies are an ideal taxonomic group for such investigations. Future studies should be designed carefully to avoid the methodological pitfalls highlighted here. Determining the ecological correlates of sensitivity of butterflies to forest modification is important for the pre-emptive identification of species of conservation concern and for generating testable hypotheses on the differential responses of species to forest modification. Experimental studies are needed to determine the mechanisms underlying the responses of species to land use change in order to develop effective strategies for the conservation of butterflies in human disturbed landscapes. [source] Parasitoid fig-wasp evolutionary diversification and variation in ecological opportunityMOLECULAR ECOLOGY, Issue 7 2010M. J. MCLEISH Abstract Ecological processes are manifest in the evolution and form of phenotype diversity. The great abundance of parasitoid species has led to speculation whether rates of speciation and extinction are dependent on parasitoid diversity. If these factors are mutually exclusive, species diversity should fluctuate instead of remaining relatively constant over time. It is not known whether radiations constrained by coevolutionary interactions conform to density-dependent diversification processes. Here we test the prediction that parasitoid fig wasp diversification responds to changes in ecological opportunity and density-independent processes. A phylogenetic approach is used to estimate relative divergence times and infer diversification rate changes using ,-statistics. Monte Carlo constant rates tests that accommodate incomplete sampling could not reject constant rates diversification. Parasitoid fig wasp diversification is consistent with a more complex explanation than density-dependent cladogenesis. The results suggest contemporary African parasitoid fig wasp diversity remains a legacy of an ancient ecological opportunity facilitated by fig tree diversification following the breakup of Pan-African forests and evolution of the savanna biome over the last 55 Ma and the more recent aridification of the African continent in the last 5 Ma. These results imply that amplified phenotypic differentiation of specialist insects coevolving with plants is coupled to evolutionarily infrequent changes in ecological opportunity. [source] Statistical confidence in parentage analysis with incomplete sampling: how many loci and offspring are needed?MOLECULAR ECOLOGY, Issue 5 2000B. D. Neff Abstract We have recently presented models to estimate parentage in breeding systems with multiple mating and incomplete sampling of the candidate parents. Here we provide formulas to calculate the statistical confidence and the optimal trade-off between the number of loci and offspring. These calculations allow an understanding of the statistical significance of the parentage estimates as well as the appropriate sampling regime required to obtain a desired level of confidence. We show that the trade-off generally depends on the parentage of the putative parents. When parentage is low, sampling effort should concentrate on increasing the number of loci. Otherwise, there are similar benefits from increasing the number of loci or offspring. We demonstrate these methods using genetic data from a nest of the bluegill sunfish (Lepomis macrochirus). [source] Structures of the magnetoionic media around the Fanaroff,Riley Class I radio galaxies 3C 31 and Hydra AMONTHLY NOTICES OF THE ROYAL ASTRONOMICAL SOCIETY, Issue 2 2008R. A. Laing ABSTRACT We use high-quality Very Large Array (VLA) images of the Fanaroff,Riley Class I radio galaxy 3C 31 at six frequencies in the range 1365,8440 MHz to explore the spatial scale and origin of the rotation measure (RM) fluctuations on the line of sight to the radio source. We analyse the distribution of the degree of polarization to show that the large depolarization asymmetry between the north and south sides of the source seen in earlier work largely disappears as the resolution is increased. We show that the depolarization seen at low resolution results primarily from unresolved gradients in a Faraday screen in front of the synchrotron-emitting plasma. We establish that the residual degree of polarization in the short-wavelength limit should follow a Burn law and we fit such a law to our data to estimate the residual depolarization at high resolution. We discuss how to interpret the structure function of RM fluctuations in the presence of a finite observing beam and how to address the effects of incomplete sampling of RM distribution using a Monte Carlo approach. We infer that the observed RM variations over selected areas of 3C 31, and the small residual depolarization found at high resolution, are consistent with a power spectrum of magnetic fluctuations in front of 3C 31 whose power-law slope changes significantly on the scales sampled by our data. The power spectrum P(f) can only have the form expected for Kolmogorov turbulence [P(f) ,f,11/3] on scales ,5 kpc. On larger scales, we find . We briefly discuss the physical interpretation of these results. We also compare the global variations of RM across 3C 31 with the results of three-dimensional simulations of the magnetic-field fluctuations in the surrounding magnetoionic medium. We infer that the RM variation across 3C 31 is qualitatively as expected from relativistic-jet models of the brightness asymmetry wherein the apparently brighter jet is on the near side of the nucleus and is seen through less magnetoionic material than the fainter jet. We show that our data are inconsistent with observing 3C 31 through a spherically symmetric magnetoionic medium, but that they are consistent with a field distribution that favours the plane perpendicular to the jet axis , probably because the radio source has evacuated a large cavity in the surrounding medium. We also apply our analysis techniques to the case of Hydra A, where the shape and the size of the cavities produced by the source in the surrounding medium are known from X-ray data. We emphasize that it is essential to account for the potential exclusion of magnetoionic material from a large volume containing the radio source when using the RM variations to derive statistical properties of the fluctuations in the foreground magnetic field. [source] | ||||||||||