Important New Information (important + new_information)

Distribution by Scientific Domains


Selected Abstracts


SEISMIC FACIES ANALYSIS BASED ON 3D MULTI-ATTRIBUTE VOLUME CLASSIFICATION, DARIYAN FORMATION, SE PERSIAN GULF

JOURNAL OF PETROLEUM GEOLOGY, Issue 2 2006
P. Farzadi
Interpretation of recently acquired 3D seismic data from the adjacent Sirri C and D oilfields in the SE Persian Gulf indicates that a 3D interpretation of seismic facies is crucial to resolve the internal stratal geometries of the Aptian Dariyan Formation. This carbonate formation passes southward into the Shu'aiba Formation, a prolific reservoir rock of similar facies in the UAE. Lack of exposures and limited cored intervals have forced reliance on the seismic data for evidence of the depositional environment and the internal architecture of potential reservoir rocks. The progradational nature of the Dariyan Formation and the occurrence of carbonate build-ups within it make this stratal geometry complex. The complex internal heterogeneity of the build-ups and presence of seismic noise make mapping of the build-ups in 3D space using conventional seismic interpretation tools difficult, despite the availability of high-quality 3D seismic data covering the area. The high quality seismic and limited well data from this field is one of the few datasets of this kind presented in the literature. A procedure for the hierarchical multi-attribute analysis of seismic facies using Paradigm's Seis Facies software is used in this study to provide a 3D interpretation of the stratal patterns. Principal component analysis reduces the noise and redundant data by representing the main data variances as a few vector components in a transformed coordinate system. Cluster analysis is performed using those components which have the greatest contribution to the maximum spread of the data variability. Six seismic attribute volumes are used in this study and the result is a single 3D classified volume. Important new information obtained from within the Dariyan Formation gives new insights into its stratigraphic distribution and internal variability. This method of processing seismic data is a step towards exploring for subtle stratigraphic traps in the study area, and may help to identify exploration targets. [source]


Genetic diversity of endangered brown bear (Ursus arctos) populations at the crossroads of Europe, Asia and Africa

DIVERSITY AND DISTRIBUTIONS, Issue 5 2009
Sébastien Calvignac
Abstract Aim, Middle East brown bears (Ursus arctos syriacus Hemprich and Ehrenberg, 1828) are presently on the edge of extinction. However, little is known of their genetic diversity. This study investigates that question as well as that of Middle East brown bear relationships to surrounding populations of the species. Location, Middle East region of south-western Asia. Methods, We performed DNA analyses on 27 brown bear individuals. Twenty ancient bone samples (Late Pleistocene to 20th century) from natural populations and seven present-day samples obtained from captive individuals were analysed. Results, Phylogenetic analyses of the mitochondrial sequences obtained from seven ancient specimens identify three distinct maternal clades, all unrelated to one recently described from North Africa. Brown bears from Iran exhibit striking diversity (three individuals, three haplotypes) and form a unique clade that cannot be linked to any extant one. Individuals from Syria belong to the Holarctic clade now observed in Eastern Europe, Turkey, Japan and North America. Specimens from Lebanon surprisingly appear as tightly linked to the clade of brown bears now in Western Europe. Moreover, we show that U. a. syriacus in captivity still harbour haplotypes closely linked to those found in ancient individuals. Main conclusion, This study brings important new information on the genetic diversity of brown bear populations at the crossroads of Europe, Asia and Africa. It reveals a high level of diversity in Middle East brown bears and extends the historical distribution of the Western European clade to the East. Our analyses also suggest the value of a specific breeding programme for captive populations. [source]


COLONY SEX RATIOS IN THE FACULTATIVELY POLYGYNOUS ANT PHEIDOLE PALLIDULA: A REANALYSIS WITH NEW DATA

EVOLUTION, Issue 5 2004
Ken R. Helms
Abstract A recent study by Fournier et al. (2003) provides important new information on sex allocation in the ant Pheidole pallidula, and proposes a new scenario for sex-ratio evolution in P. pallidula and similar species. However, Helms proposed to the authors that two important conclusions of the study were questionable because of potential problems with the analyses. Here we provide new data and a reanalysis that strengthens the conclusion that colony sex ratio is associated with breeding system (i.e., polygyny or monogyny). However, the proposal that colonies shift from monogyny to polygyny when they become larger and more productive is weakened because there is substantial overlap in productivity between monogynous and polygynous colonies. [source]


Molecular diagnosis in dermatopathology: What makes sense, and what doesn't

EXPERIMENTAL DERMATOLOGY, Issue 1 2009
Markus Braun-Falco
Abstract:, Molecular techniques have provided us with a wealth of information about biological events in healthy individual, and improved tremendously our understanding about the pathogenesis of a huge variety of cutaneous diseases. Those methods have originally been invented to support basic scientific investigations on a molecular level and are translated increasingly into sophisticated diagnostic tools changing the classic paradigm of diagnostic pathology; among them are immunohistochemistry (IHC), polymerase chain reaction (PCR), G-banding, loss of heterozygosity, fluorescence in situ hybridization (FISH), chromogen in situ hybridization (CISH), comparative genomic hybridization on chromosomes and microarray technology. Some of them such as IHC and PCR have already been standardized to a level that allows its utility in daily routine diagnostics for several dermatological diseases. For others like array-based technologies, their optimal indications await to be fully determined. These ancillary methods have the great potential to contribute important new information to challenging cases, and will help to improve diagnostic accuracy particularly in cases in which conventional histopathology is ambiguous. Thus, they will broaden our armamentarium for diagnostic pathology. Herein, some key techniques will be reviewed and their applicability towards the diagnosis of dermatological diseases critically discussed. [source]


Henry VII and the Bristol expeditions to North America: the Condon documents

HISTORICAL RESEARCH, Issue 221 2010
Evan T. Jones
Little is known about the Bristol discovery voyages of the years 1496,1508 and, as my recent article in this journal has shown, even less is certain. The current article contributes to research in this field by publishing two ,new' documents, which were first discovered in the nineteen-seventies but, for the reasons explained here, have not been published until now. These documents are significant both because they reveal important new information about the voyages and because they serve to confirm some of the remarkable, but previously unsubstantiated, claims made about the expeditions by the late Dr. Alwyn Ruddock. [source]


Extending point pattern analysis for objects of finite size and irregular shape

JOURNAL OF ECOLOGY, Issue 4 2006
THORSTEN WIEGAND
Summary 1We use a grid- and simulation-based approach to extend point pattern analysis to deal with plants of finite size and irregular shape, and compare the results of our approach with that of the conventional point approximation. The plants are approximated by using an underlying grid and may occupy several adjacent grid cells depending on their size and shape. Null models correspond to that of point pattern analysis but need to be modified to account for the finite size and irregular shape of plants. 2We use a mapped area of a grass-shrub steppe in semi-arid Patagonia, Argentina, to show that the shrub community is essentially randomly structured, but that shrubs facilitate grasses in their immediate neighbourhood. 3The occurrence of this random spatial structure provides important new information on the biology of shrub populations. In general, previous data from semi-arid and arid ecosystems have shown that adult shrubs tend to show over-dispersed patterns, whereas juveniles are clumped. 4We find that the point approximation may produce misleading results (i) if plant size varies greatly, (ii) if the scale of interest is of the same order of magnitude as the size of the plants, and (iii) if the plants of a given pattern are constrained through competition for space by the presence of other plants. The point approximation worked well in all other cases, but usually depicted weaker significant effects than when the size and shape of plants were taken into account. 5Our approach to quantifying small-scale spatial patterns in plant communities has broad applications, including the study of facilitation and competition. Ecologists will be able to use the software available to take advantage of these methods. [source]


On a fast calculation of structure factors at a subatomic resolution

ACTA CRYSTALLOGRAPHICA SECTION A, Issue 1 2004
P. V. Afonine
In the last decade, the progress of protein crystallography allowed several protein structures to be solved at a resolution higher than 0.9,Ĺ. Such studies provide researchers with important new information reflecting very fine structural details. The signal from these details is very weak with respect to that corresponding to the whole structure. Its analysis requires high-quality data, which previously were available only for crystals of small molecules, and a high accuracy of calculations. The calculation of structure factors using direct formulae, traditional for `small-molecule' crystallography, allows a relatively simple accuracy control. For macromolecular crystals, diffraction data sets at a subatomic resolution contain hundreds of thousands of reflections, and the number of parameters used to describe the corresponding models may reach the same order. Therefore, the direct way of calculating structure factors becomes very time expensive when applied to large molecules. These problems of high accuracy and computational efficiency require a re-examination of computer tools and algorithms. The calculation of model structure factors through an intermediate generation of an electron density [Sayre (1951). Acta Cryst.4, 362,367; Ten Eyck (1977). Acta Cryst. A33, 486,492] may be much more computationally efficient, but contains some parameters (grid step, `effective' atom radii etc.) whose influence on the accuracy of the calculation is not straightforward. At the same time, the choice of parameters within safety margins that largely ensure a sufficient accuracy may result in a significant loss of the CPU time, making it close to the time for the direct-formulae calculations. The impact of the different parameters on the computer efficiency of structure-factor calculation is studied. It is shown that an appropriate choice of these parameters allows the structure factors to be obtained with a high accuracy and in a significantly shorter time than that required when using the direct formulae. Practical algorithms for the optimal choice of the parameters are suggested. [source]


The ups and downs of daily life: Profiling circadian gene expression in Drosophila

BIOESSAYS, Issue 6 2002
Paul D. Etter
Circadian rhythms are responsible for 24-hour oscillations in diverse biological processes. While the central genes governing circadian pacemaker rhythmicity have largely been identified, clock-controlled output molecules responsible for regulating rhythmic behaviors remain largely unknown. Two recent reports from McDonald and Rosbash1 and Claridge-Chang et al.2 address this issue. By identifying a large number of genes whose mRNA levels show circadian oscillations, the reports provide important new information on the biology of circadian rhythm. In addition, the reports illustrate both the power and limitations of microarray-based methods for profiling mRNA expression on a genomic scale. BioEssays 24:494,498, 2002. © 2002 Wiley Periodicals, Inc. [source]