Graphical Interface (graphical + interface)

Distribution by Scientific Domains


Selected Abstracts


An educational tool for power electronics circuits

COMPUTER APPLICATIONS IN ENGINEERING EDUCATION, Issue 1 2010
Cetin Elmas
Abstract In this study, an educational tool has been prepared for a shorter term and more economic education of power electronics circuits. In parallel with the improvements of semiconductor technology, the development of power electronics circuits has magnified the importance of either teorical or practical education of power electronics course. The education of power electronic circuits in laboratory is an agelong, costly piece of work. In this study, to overcome the mentioned negativities, a tool has been prepared for the education of power electronic circuits. The tool, which has been prepared on C++ Builder environment has a flexible structure and a graphical interface. It has enabled the analysis of working principles of the circuits and traceability of the system response by the help of graphics, under different conditions created by changing the values of circuit elements. © 2009 Wiley Periodicals, Inc. Comput Appl Eng Educ 18: 157,165, 2010; Published online in Wiley InterScience (www.interscience.wiley.com); DOI 10.1002/cae.20237 [source]


An educational tool for controlling of SRM

COMPUTER APPLICATIONS IN ENGINEERING EDUCATION, Issue 4 2008
Tuncay Yigit
Abstract This article introduces an educational tool for a switched reluctance motor (SRM) drive system. It is prepared for undergraduate and graduate level students. Classical PI and Genetic PI controllers are used in SRM drive system. The Genetic PI controller was applied to the speed loop, replacing the classical PI controller. The tool software was implemented using C++ Builder on a PC. It has flexible structure and graphical interface. The students can be easily establishing a thorough understanding of both classical PI and genetic PI controller for a SRM drive system. The education tool allowed the student to interact with the SRM drive system and it is using controllers. Then it is responses on a dynamic and instantaneous basis under different operating conditions. © 2008 Wiley Periodicals, Inc. Comput Appl Eng Educ 16: 268,279, 2008; Published online in Wiley InterScience (www.interscience.wiley.com); DOI 10.1002/cae20148 [source]


JTruss: A CAD-oriented educational open-source software for static analysis of truss-type structures

COMPUTER APPLICATIONS IN ENGINEERING EDUCATION, Issue 4 2008
Francesco Romeo
Abstract A CAD-oriented software (JTruss) for the static analysis of planar and spatial truss-type structures is presented. Developed for educational purposes, JTruss is part of an open-source project and is characterised by complete accessibility (i.e. platform independent) and high software compatibility. CAD methodologies are employed to implement commands for handling graphic models. A student friendly graphical interface, tailored mainly for structural mechanics introductory courses in engineering and architecture programs, is conceived. Accordingly, the standard sequence involved in the software design, namely pre-processing, processing and post-processing, is implemented aiming to improve the structural behaviour interpretation. © 2008 Wiley Periodicals, Inc. Comput Appl Eng Educ 16: 280,288, 2008; Published online in Wiley InterScience (www.interscience.wiley.com); DOI 10.1002/cae20150 [source]


Nuclear magnetic resonance data processing.

CONCEPTS IN MAGNETIC RESONANCE, Issue 2 2003
MestRe-C: A software package for desktop computers
Abstract Magnetic Resonance Companion (MestRe-C) is a software package that offers state-of-the-art facilities for data processing, visualization, and analysis of high-resolution nuclear magnetic resonance (NMR) data, combined with a robust, user-friendly graphical interface that fully exploits the power and flexibility of the Windows platform. The program provides a variety of conversion facilities for most NMR spectrometer formats and includes all the conventional processing, displaying, and plotting capabilities of an NMR program, as well as more advanced processing techniques. A brief review of the basic concepts of NMR data processing is included also. © 2003 Wiley Periodicals, Inc. Concepts Magn Reson Part A 19A: 80,96, 2003. [source]


Dynamic load-balancing mechanism for distributed Java applications

CONCURRENCY AND COMPUTATION: PRACTICE & EXPERIENCE, Issue 3 2006
Violeta Felea
Abstract Program environments or operating systems generally leave the decision on the allocation of program entities to the developer, offering either placement directives, or tools available through the manipulation of a graphical interface. These approaches cannot always take into account the dynamic behavior of applications, dynamicity in the execution environment or the heterogeneity of the execution platform. Transparent deployment algorithms are necessary for automizing and optimizing application distribution. The Adaptive Distributed Applications in Java (ADAJ) project deals with placement and migration of Java objects. It automatically deploys parallel Java applications on a cluster of workstations using monitoring information about the application behavior. The transparency obtained through the integration of these tools in the middleware makes such an environment easy to use and improves efficiency. Copyright © 2005 John Wiley & Sons, Ltd. [source]


Towards an integrated computational tool for spatial analysis in macroecology and biogeography

GLOBAL ECOLOGY, Issue 4 2006
Thiago Fernando L. V. B. Rangel
ABSTRACT Because most macroecological and biodiversity data are spatially autocorrelated, special tools for describing spatial structures and dealing with hypothesis testing are usually required. Unfortunately, most of these methods have not been available in a single statistical package. Consequently, using these tools is still a challenge for most ecologists and biogeographers. In this paper, we present sam (Spatial Analysis in Macroecology), a new, easy-to-use, freeware package for spatial analysis in macroecology and biogeography. Through an intuitive, fully graphical interface, this package allows the user to describe spatial patterns in variables and provides an explicit spatial framework for standard techniques of regression and correlation. Moran's I autocorrelation coefficient can be calculated based on a range of matrices describing spatial relationships, for original variables as well as for residuals of regression models, which can also include filtering components (obtained by standard trend surface analysis or by principal coordinates of neighbour matrices). sam also offers tools for correcting the number of degrees of freedom when calculating the significance of correlation coefficients. Explicit spatial modelling using several forms of autoregression and generalized least-squares models are also available. We believe this new tool will provide researchers with the basic statistical tools to resolve autocorrelation problems and, simultaneously, to explore spatial components in macroecological and biogeographical data. Although the program was designed primarily for the applications in macroecology and biogeography, most of sam's statistical tools will be useful for all kinds of surface pattern spatial analysis. The program is freely available at http://www.ecoevol.ufg.br/sam (permanent URL at http://purl.oclc.org/sam/). [source]


Application of Krylov subspaces to SPECT imaging

INTERNATIONAL JOURNAL OF IMAGING SYSTEMS AND TECHNOLOGY, Issue 5 2002
P. Calvini
The application of the conjugate gradient (CG) algorithm to the problem of data reconstruction in SPECT imaging indicates that most of the useful information is already contained in Krylov subspaces of small dimension, ranging from 9 (two-dimensional case) to 15 (three-dimensional case). On this basis, a new, proposed approach can be basically summarized as follows: construction of a basis spanning a Krylov subspace of suitable dimension and projection of the projector,backprojector matrix (a 106 × 106 matrix in the three-dimensional case) onto such a subspace. In this way, one is led to a problem of low dimensionality, for which regularized solutions can be easily and quickly obtained. The required SPECT activity map is expanded as a linear combination of the basis elements spanning the Krylov subspace and the regularization acts by modifying the coefficients of such an expansion. By means of a suitable graphical interface, the tuning of the regularization parameter(s) can be performed interactively on the basis of the visual inspection of one or some slices cut from a reconstruction. © 2003 Wiley Periodicals, Inc. Int J Imaging Syst Technol 12, 217,228, 2002; Published online in Wiley InterScience (www.interscience.wiley.com). DOI 10.1002/ima.10026 [source]


QUALX: a computer program for qualitative analysis using powder diffraction data

JOURNAL OF APPLIED CRYSTALLOGRAPHY, Issue 4 2008
Angela Altomare
QUALX is a new computer program for phase identification using powder diffraction data. It uses the Powder Diffraction File database, where a search for the phase best matching the experimental powder diffraction pattern is carried out. The program is characterized by a high level of automation: the traditional steps aimed at interpreting the experimental pattern before the search (background estimation, peak search, peak intensity evaluation) are executed automatically. The search may be carried out via constraints on compound name and/or chemical elements. In addition, several graphical options requested interactively enable the user to perform zero point correction evaluation, K,2 stripping and smoothing. The program, written in Fortran95 and C++, runs on PCs under the Windows XP operating system. It is supported by a very effective graphical interface. [source]


OLEX: new software for visualization and analysis of extended crystal structures

JOURNAL OF APPLIED CRYSTALLOGRAPHY, Issue 5 2003
Oleg V. Dolomanov
We have developed new software (OLEX) for the visualization and analysis of extended crystal structures. This software has a Windows-compatible mouse-driven graphical interface which gives full control over all structural elements. OLEX provides the user with tools to construct topological networks, visualize interpenetrating or overlapping fragments, and analyse networks constructed fully or partially by exploiting short interactions. It is also easy to generate conventional ellipsoid, ball-and-stick or packing plots. [source]


New techniques for indexing: N-TREOR in EXPO

JOURNAL OF APPLIED CRYSTALLOGRAPHY, Issue 4 2000
Angela Altomare
Indexing of a powder diffraction pattern is still a critical point in procedures aiming at solving crystal structures from powder data. New code has been associated to the program TREOR90 in order to define an efficient peak search procedure, to modify the crystallographic decisions coded into TREOR90 to make it more exhaustive, to refine the selected unit cell automatically, and to make the entire procedure user friendly, via a graphical interface. The new program, called N-TREOR, has been integrated into the package EXPO to create a suite of programs able to provide a structural model from the analysis of the experimental pattern. N-TREOR is also available as a stand-alone program. [source]


SENSOMINER: A PACKAGE FOR SENSORY DATA ANALYSIS

JOURNAL OF SENSORY STUDIES, Issue 1 2008
SEBASTIEN LE
ABSTRACT We propose a new package for sensory data analysis, named SensoMineR. SensoMineR is implemented in the R programming environment and can be accessed at the following addresses: http://sensominer.free.fr or http://cran.r-project.org. This package produces graphical displays of data that are simple to interpret, and it also provides syntheses of results issuing from various analysis of variance models or from various factor analysis methods accompanied with confidence ellipses. PRACTICAL APPLICATIONS SensoMineR is a free software intended for sensory analysts from both academic and corporate institutions. SensoMineR is an easy and powerful solution that tackles the following problems: characterization of the products, panel performance assessment, links between sensory and instrumental data, consumer's preferences, napping evaluation, optimal designs. SensoMineR is implemented in R and can be used easily with the help of a very intuitive graphical interface. [source]


msatcommander: detection of microsatellite repeat arrays and automated, locus-specific primer design

MOLECULAR ECOLOGY RESOURCES, Issue 1 2008
BRANT C. FAIRCLOTH
Abstract msatcommander is a platform-independent program designed to search for microsatellite arrays, design primers, and tag primers using an automated routine. msatcommander accepts as input DNA sequence data in single-sequence or concatenated, fasta -formatted files. Search data and locus-specific primers are written to comma-separated value files for subsequent use in spreadsheet or database programs. Binary versions of the graphical interface for msatcommander are available for Apple OS X and Windows XP. Users of other operating systems may run the graphical interface version using the available source code, provided their environment supports at least Python 2.4, Biopython 1.43, and wxPython 2.8. msatcommander is available from http://code.google.com/p/msatcommander/. [source]


OVNIp: An open source application facilitating the interpretation, the validation and the edition of proteomics data generated by MS analyses and de novo sequencing

PROTEINS: STRUCTURE, FUNCTION AND BIOINFORMATICS, Issue 9 2010
Dominique Tessier
Abstract Several academic software are available to help the validation and reporting of proteomics data generated by MS analyses. However, to our knowledge, none of them have been conceived to meet the particular needs generated by the study of organisms whose genomes are not sequenced. In that context, we have developed OVNIp, an open-source application which facilitates the whole process of proteomics results interpretation. One of its unique attributes is its capacity to compile multiple results (from several search engines and/or several databank searches) with a resolution of conflicting interpretations. Moreover, OVNIp enables automated exploitation of de novo sequences generated from unassigned MS/MS spectra leading to higher sequence coverage and enhancing confidence in the identified proteins. The exploitation of these additional spectra might also identify novel proteins through a MS-BLAST search, which can be easily ran from the OVNIp interface. Beyond this primary scope, OVNIp can also benefit to users who look for a simple standalone application to both visualize and confirm MS/MS result interpretations through a simple graphical interface and generate reports according to user-defined forms which may integrate the prerequisites for publication. Sources, documentation and a stable release for Windows are available at http://wwwappli.nantes.inra.fr:8180/OVNIp. [source]


Confidence assessment for protein identification by using peptide-mass fingerprinting data

PROTEINS: STRUCTURE, FUNCTION AND BIOINFORMATICS, Issue 11 2009
Zhao Song
Abstract Protein identification using Peptide Mass Fingerprinting (PMF) data remains an important yet only partially solved problem. Current computational methods may lead to false positive identification since the top hit from a database search may not be the target protein. In addition, the identification scores assigned singly by a scoring function (raw scores) are not normalized. Therefore, the ranking based on raw scores may be biased. To address the above issue, we have developed a statistical model to evaluate the confidence of the raw score and to improve the ranking of proteins for identification. The results show that the statistical model better ranks the correct protein than the raw scores. Our study provides a new method to enhance the accuracy of protein identification by using PMF data. We incorporated the method into our software package "Protein-Decision" together with a user-friendly graphical interface. A standalone version of Protein-Decision is freely available at http://digbio.missouri.edu/ProteinDecision/. [source]


Implementation, performance, and science results from a 30.7 TFLOPS IBM BladeCenter cluster

CONCURRENCY AND COMPUTATION: PRACTICE & EXPERIENCE, Issue 2 2010
Craig A. Stewart
Abstract This paper describes Indiana University's implementation, performance testing, and use of a large high performance computing system. IU's Big Red, a 20.48 TFLOPS IBM e1350 BladeCenter cluster, appeared in the 27th Top500 list as the 23rd fastest supercomputer in the world in June 2006. In spring 2007, this computer was upgraded to 30.72 TFLOPS. The e1350 BladeCenter architecture, including two internal networks accessible to users and user applications and two networks used exclusively for system management, has enabled the system to provide good scalability on many important applications while being well manageable. Implementing a system based on the JS21 Blade and PowerPC 970MP processor within the US TeraGrid presented certain challenges, given that Intel-compatible processors dominate the TeraGrid. However, the particular characteristics of the PowerPC have enabled it to be highly popular among certain application communities, particularly users of molecular dynamics and weather forecasting codes. A critical aspect of Big Red's implementation has been a focus on Science Gateways, which provide graphical interfaces to systems supporting end-to-end scientific workflows. Several Science Gateways have been implemented that access Big Red as a computational resource,some via the TeraGrid, some not affiliated with the TeraGrid. In summary, Big Red has been successfully integrated with the TeraGrid, and is used by many researchers locally at IU via grids and Science Gateways. It has been a success in terms of enabling scientific discoveries at IU and, via the TeraGrid, across the US. Copyright © 2009 John Wiley & Sons, Ltd. [source]