GROUND WATER, Issue 4 2006
George S. Roadcap
Chemically unusual ground water can provide an environment for novel communities of bacteria to develop. Here, we describe a diverse microbial community that inhabits extremely alkaline (pH > 12) ground water from the Lake Calumet area of Chicago, Illinois, where historic dumping of steel slag has filled in a wetland. Using microbial 16S ribosomal ribonucleic acid gene sequencing and microcosm experiments, we confirmed the presence and growth of a variety of alkaliphilic ,-Proteobacteria, Bacillus, and Clostridium species at pH up to 13.2. Many of the bacterial sequences most closely matched those of other alkaliphiles found in more moderately alkaline water around the world. Oxidation of dihydrogen produced by reaction of water with steel slag is likely a primary energy source to the community. The widespread occurrence of iron-oxidizing bacteria suggests that reduced iron serves as an additional energy source. These results extend upward the known range of pH tolerance for a microbial community by as much as 2 pH units. The community may provide a source of novel microbes and enzymes that can be exploited under alkaline conditions. [source]

Geochemistry of Extremely Alkaline (pH > 12) Ground Water in Slag-Fill Aquifers

GROUND WATER, Issue 6 2005
George S. Roadcap
Extremely alkaline ground water has been found underneath many shuttered steel mills and slag dumps and has been an impediment to the cleanup and economic redevelopment of these sites because little is known about the geochemistry. A large number of these sites occur in the Lake Calumet region of Chicago, Illinois, where large-scale infilling of the wetlands with steel slag has created an aquifer with pH values as high as 12.8. To understand the geochemistry of the alkaline ground water system, we analyzed samples of ground water and the associated slag and weathering products from four sites. We also considered several potential remediation schemes to lower the pH and toxicity of the water. The principal cause of the alkaline conditions is the weathering of calcium silicates within the slag. The resulting ground water at most of the sites is dominated by Ca2+ and OH, in equilibrium with Ca(OH)2. Where the alkaline ground water discharges in springs, atmospheric CO2 dissolves into the water and thick layers of calcite form. Iron, manganese, and other metals in the metallic portion of the slag have corroded to form more stable low-temperature oxides and sulfides and have not accumulated in large concentrations in the ground water. Calcite precipitated at the springs is rich in a number of heavy metals, suggesting that metals can move through the system as particulate matter. Air sparging appears to be an effective remediation strategy for reducing the toxicity of discharging alkaline water. [source]

Production and characterization of monoclonal antibodies to serine proteinase allergens in Penicillium and Aspergillus species

CLINICAL & EXPERIMENTAL ALLERGY, Issue 11 2000
W.-L. Lin
Background Alkaline and/or vacuolar serine proteinases are major allergens in prevalent airborne Penicillium and Aspergillus species. Objective The object of this study is to generate and characterize monoclonal antibodies against these serine proteinase allergens. Methods BALB/c mice were immunized individually with the Penicillium citrinum culture medium or the crude extract and culture medium preparations of Aspergillus fumigatus. Hybridoma cells that secrete monoclonal antibodies against serine proteinase allergens were selected by immunoblotting. Antigens in three different Penicillium (P. citrinum, P. notatum and P. oxalicum) and two different Aspergillus species (A. fumigatus, and A. flavus) recognized by these monoclonal antibodies were analysed by sodium dodecyl sulphate and two-dimensional polyacrylamide gel electrophoresis immunoblotting and N-terminal amino acid sequence analysis. Results Four (PCM8, PCM10, PCM16 and PCM39) and one (FUM20) monoclonal antibodies against serine proteinase allergens were generated after fusion of NS-1 cells with spleen cells obtained from BALB/c mice immunized with antigens from P. citrinum and A. fumigatus, respectively. Immunoblotting results showed that PCM8 reacted with an alkaline serine proteinase allergen in P. citrinum and P. notatum. PCM10 and PCM39 reacted with the alkaline serine proteinase in two Penicillium (P. citrinum, P. notatum) and two Aspergillus species (A. fumigatus, and A. flavus) tested. PCM16 reacted with the alkaline serine proteinase allergen in P. citrinum, A. fumigatus and A. flavus but not with that in P. notatum. MoAb FUM20 reacted with the alkaline serine proteinase allergen in two Aspergillus species (A. fumigatus and A. flavus) but not with that in two different Penicillium species (P. citrinum, P. notatum) tested. Among these five monoclonal antibodies generated, only PCM39 and FUM20 can react with the vacuolar serine proteinase allergen in P. notatum, P. oxalicum and in A. fumigatus. The 35 kDa P. citrinum component that reacted with FUM20 has an N-terminal amino acid sequence of DSPSVEKNAP. Conclusion Five monoclonal antibodies against different epitopes of the serine proteinase major allergens in prevalent Penicillium and Aspergillus species were generated in the present study. Antibodies obtained may be useful in the characterization and standardization of serine proteinase allergens in crude fungal extracts. [source]

Barrett's esophagus: what is the poison , alkaline, biliary or acidic reflux?,

DISEASES OF THE ESOPHAGUS, Issue 1 2002
C. A. Gutschow
First page of article [source]

Evaluation of CE methods for global metabolic profiling of urine

ELECTROPHORESIS, Issue 14 2010
Rawi Ramautar
Abstract In this study, the usefulness of noncovalently coated capillaries with layers of charged polymers is investigated to obtain global electrophoretic profiles of urinary metabolites covering a broad range of different compound classes in a highly repeatable way. Capillaries were coated with a bilayer of polybrene (PB) and poly(vinyl sulfonate) (PVS), or with a triple layer of PB, dextran sulfate (DS) and PB. The bilayer and triple layer coatings were evaluated at acidic (pH 2.0) and alkaline (pH 9.0) separation conditions, thereby providing separation conditions for basic and acidic compounds. A representative metabolite mixture and spiked urine samples were used for the evaluation of the four CE methods. Migration time repeatability (RSD<2%) and plate numbers (N, 100,000,400,000) were similar for the test compounds in all CE methods, except for some multivalent ions that may exhibit adsorption to oppositely charged coatings. The analysis of cationic compounds with the PB-DS-PB CE method at low pH (i.e. after the EOF time) provided a larger separation window and number of separated peaks in urine compared to the analysis with the PB-PVS CE method at low pH (i.e. before the EOF time). Approximately, 600 molecular features were detected in rat urine by the PB-DS-PB CE-MS method whereas about 300 features were found with the PB-PVS CE-MS method. This difference can be attributed to reduced comigration of compounds with the PB-DS-PB CE-MS method and a related decrease of ion suppression. With regard to the analysis of anionic compounds by CE-MS, in general analyte responses were significantly lower than that for cationic compounds, most probably due to less efficient ionization and to ion suppression effects caused by the background electrolyte. Hence, further optimization is required for the sensitive CE-MS analysis of anionic compounds in body fluids. It is concluded that the selection of a CE method for profiling of cationic metabolites in urine depends on the purpose of the study. For high-throughput analyses, the PB-PVS CE-MS method is favored whereas the PB-DS-PB CE-MS method provides a more information-rich metabolic profile, but at the cost of prolonged analysis time. [source]

Autoinducers extracted from microbial mats reveal a surprising diversity of N -acylhomoserine lactones (AHLs) and abundance changes that may relate to diel pH

ENVIRONMENTAL MICROBIOLOGY, Issue 2 2009
Alan W. Decho
Summary Microbial mats are highly structured and diverse communities, and one of the earliest-known life assemblages. Mat bacteria interact within an environment marked by strong geochemical gradients and fluctuations. We examined natural mat systems for the presence of autoinducers involved in quorum sensing, a form of cell,cell communication. Our results revealed that a diverse array of N -acylhomoserine lactones (AHLs) including C4 - to C14 -AHLs, were identified from mat extracts using mass spectrometry (MS), with further confirmation by MS/MS-collision-induced dissociation (CID), and additions of external standards. Microelectrode measurements showed that mats exhibited diel pH fluctuations, ranging from alkaline (pH 9.4) during daytime (net photosynthesis) to acidic (pH 6.8) during darkness (net respiration/fermentation). Under laboratory conditions, AHLs having shorter acyl-chains were degraded within the time frame that daily alkaline pH (> 8.2) conditions exist in mats. Intensive sampling of mats after full day- or night-time incubations revealed that accumulations of extractable shorter-chain AHLs (e.g. C8 - and C10 -AHLs) were significantly (P < 0.001) diminished during daytime. Our study offers evidence that stabilities of AHLs under natural conditions may be influenced by the proximal extracellular environment. We further propose that the ancient periodicity of photosynthesis/respiration in mats may potentially drive a mechanism for diel differences in activities of certain autoinducers, and hence bacterial activities mediated through quorum sensing. [source]

Effects of estimates from different geochemical models on metal fate predicted by coupled speciation-fate models,

ENVIRONMENTAL TOXICOLOGY & CHEMISTRY, Issue 5 2008
Satyendra P. Bhavsar
Abstract Coupled metal speciation-fate models are an improvement over stand-alone fate-transport models for accurately assessing metal fate and transport. These coupled models estimate fate-controlling partition coefficients using geochemical speciation/complexation models. Commercially available geochemical models are practical options for a two-step, loose coupling with fate-transport models. These models differ in their partitioning estimates because of differences in assumptions, databases, and so on. The present study examines the effects of differences in estimates from geochemical models on estimates of cationic metal fate using two geochemical models: the Windermere humic aqueous model (WHAM) and the minicomputer equilibrium+ model (MINEQL+). The results from each geochemical model were used as input to the fate module of TRANSPEC (a general, coupled metal transport and speciation model). The two versions of the TRANSPEC model were then used to assess the fate of five cationic metals (Cd, Cu, Ni, Pb, and Zn) in Ross Lake (Flin Flon, MB, Canada; alkaline, eutrophic, mine impacted), Kelly Lake (Sudbury, ON, Canada; circumneutral, mesotrophic, mine influenced), and Lake Tantaré (Quebec City, QC, Canada; acidic, oligotrophic, pristine). For relatively soluble metals (Cd, Ni, and Zn), the WHAM and MINEQL+ estimates of speciation/complexation were similar for Ross and Kelly lakes but differed for Lake Tantaré. These differences, however, did not result in significant differences in overall fate estimates. Marked differences were observed between the WHAM and MINEQL+ estimates of partition coefficient, Kd, for more particle-reactive Cu and Pb that translated into the greatest impact on fate in mesotrophic Kelly Lake, in which particle movement is important for fate. [source]

Co-inheritance of Hb Hershey [,70(E14) Ala,Gly] and Hb La Pommeraie [,133(H11)Val,Met] in a Sicilian subject

EUROPEAN JOURNAL OF HAEMATOLOGY, Issue 5 2010
Antonino Giambona
Abstract Objectives:,This report represents the first observation in Sicily of two rare , -globin gene variants, Hb Hershey [,70(E14) Ala,Gly] and Hb La Pommeraie [,133(H11)Val,Met], found in a 35-year-old male patient from Messina, in the north-east of Sicily during population screening for hemoglobinopathies. Methods: The occurrence of the Hb variants was assessed by cation exchange chromatography while complete blood counts were obtained using automatic cell counters. Red cell lysates were analyzed by electrophoresis at alkaline and acid pH. Stability of hemoglobin was checked by the isopropanol precipitation test and by the heat tests while inclusion bodies and reticulocyte count were determined by incubation of blood samples with brilliant cresyl blue. Molecular analysis was performed by DNA sequencing of ,- and , -globin genes. Results: We observed an abnormally high performance liquid chromatography elution with a slight reduction in mean corpuscular volume and mean corpuscular haemoglobin parameters and mutations at codon 70 GCC,GGC (Hb Hershey) and at codon 133 GTG,ATG (Hb La Pommeraie) in , -globin gene. Conclusion: Family analysis of three generations demonstrated the presence of these two mutations in trans. So it was possible to describe the phenotypes of these variants in a heterozygous state and in double heterozygous state. [source]

Surface podzolization in Cambisols under deciduous forest in the Belgian loess belt

EUROPEAN JOURNAL OF SOIL SCIENCE, Issue 1 2000
V. Brahy
Summary Surface podzolization involves the migration of metal,humus complexes to a depth of a few centimetres. In acid soils derived from loess, this process has been diagnosed mainly by morphological observation. We investigated this process in a toposequence of Luvisols and Cambisols on loess using selective extraction and mineralogical data as well as characteristics of the leaf litter. The humus type (O and OAh horizons) is a moder in the three Luvisols and one of the Cambisols, whereas it is a fibrimor in the two other Cambisols. The contents in total alkaline and alkaline-earth cations range from 35 to 60 cmolc kg,1 in the fibrimor and from 40 to 90 cmolc kg,1 in the moder humus. In the two Cambisols with fibrimor smectite occurs in the clay fraction of the Ah horizon; Fe,humus complexes seem to have moved, but no more than 9 cm, from the Ah to the AB horizon beneath. Relative to the Ah horizon, the upper part of the AB has larger tetraborate-extractable Fe/Al ratio and optical density of the oxalate extract. Such features converge to diagnose surface podzolization in the Cambisols with fibrimor. However, they were not detected in the Cambisol and Luvisols with moder. In the two Cambisols with fibrimor, surface podzolization is consistent with (i) their smaller iron content, (ii) their more advanced weathering stage and (iii) their lower acid neutralizing capacity. [source]

Functionalized-Silk-Based Active Optofluidic Devices

ADVANCED FUNCTIONAL MATERIALS, Issue 7 2010
Konstantinos Tsioris
Abstract Silk protein from the silkworm Bombyx mori has excellent chemical and mechanical stability, biocompatibility, and optical properties. Additionally, when the protein is purified and reformed into materials, the biochemical functions of dopants entrained in the protein matrix are stabilized and retained. This unique combination of properties make silk a useful multifunctional material platform for the development of sensor devices. An approach to increase the functions of silk-based devices through chemical modifications to demonstrate an active optofluidic device to sense pH is presented. Silk protein is chemically modified with 4-aminobenzoic acid to add spectral-color-responsive pH sensitivity. The functionalized silk is combined with the elastomer poly(dimethyl siloxane) in a single microfluidic device. The microfluidic device allows spatial and temporal control of the delivery of analytic solutions to the system to provide the optical response of the optofluidic device. The modified silk is stable and spectrally responsive over a wide pH range from alkaline to acidic. [source]

Principal features of impact-generated hydrothermal circulation systems: mineralogical and geochemical evidence

GEOFLUIDS (ELECTRONIC), Issue 3 2005
MIKHAIL V. NAUMOVArticle first published online: 14 JUL 200
Abstract Any hypervelocity impact generates a hydrothermal circulation system in resulting craters. Common characteristics of hydrothermal fluids mobilized within impact structures are considered, based on mineralogical and geochemical investigations, to date. There is similarity between the hydrothermal mineral associations in the majority of terrestrial craters; an assemblage of clay minerals,zeolites,calcite,pyrite is predominant. Combining mineralogical, geochemical, fluid inclusion, and stable isotope data, the distinctive characteristics of impact-generated hydrothermal fluids can be distinguished as follows: (i) superficial, meteoric and ground water and, possibly, products of dehydration and degassing of minerals under shock are the sources of hot water solutions; (ii) shocked target rocks are sources of the mineral components of the solutions; (iii) flow of fluids occurs mainly in the liquid state; (iv) high rates of flow are likely (10,4 to 10,3 m s,1); (v) fluids are predominantly aqueous and of low salinity; (vi) fluids are weakly alkaline to near-neutral (pH 6,8) and are supersaturated in silica during the entire hydrothermal process because of the strong predominance of shock-disordered aluminosilicates and fusion glasses in the host rocks; and (vii) variations in the properties of the circulating solutions, as well as the spatial distribution of secondary mineral assemblages are controlled by tempera ure gradients within the circulation cell and by a progressive cooling of the impact crater. Products of impact-generated hydrothermal processes are similar to the hydrothermal mineralization in volcanic areas, as well as in modern geothermal systems, but impacts are always characterized by a retrograde sequence of alteration minerals. [source]

The genesis of the carbonatized and silicified ultramafics known as listvenites: a case study from the Mihal,çç,k region (Eski,ehir), NW Turkey

GEOLOGICAL JOURNAL, Issue 5 2006
Mehmet Akbulut
Abstract The Mihal,çç,k region (Eski,ehir) in NW Turkey includes an ophiolitic assemblage with a serpentinite-matrix mélange. The serpentinites of this mélange host silica-carbonate metasomatites which were previously named as listvenites. Our mineralogical and geochemical studies revealed that these alteration assemblages represent members of the listvenitic series, mainly the carbonate rocks, silica-carbonate rocks and birbirites, rather than true listvenites (sensu stricto). Tectonic activity and lithology are principal factors that control the formation of these assemblages. Carbonatization and silicification of the serpentinite host-rock is generated by CO2, SiO2 -rich H2O hydrothermal fluid which includes As, Ba, Sb and Sr. Low precious metal (Au, Ag) contents of the alteration assemblages indicate lack of these metals in the fluid. Primary assemblages of the alteration are carbonate rocks that are followed by silica-carbonate rocks and birbirites, respectively. Petrographic studies and chemical analyses suggested an alkaline and moderate to high temperature (350,400°C) fluid with low oxygen and sulphur fugacity for the carbonatization of the serpentinites. The low temperature phases observed in the subsequent silicification indicated that the fluid cooled during progressive alteration. The increasing Fe-oxide content and sulphur phases also suggested increasing oxygen and sulphur fugacity during this secondary process and silica-carbonate rock formation. The occurrence of birbirites is considered as a result of reactivation of tectonic features. These rocks are classified in two sub-groups; the Group 1 birbirites show analogous rare earth element (REE) trends with the serpentinite host-rock, and the Group 2 birbirites simulate the REE trends of the nearby tectonic granitoid slices. The unorthodox REE trend of Group 2 birbirites is interpreted to have resulted from a mobilization process triggered by the weathering solutions rather than being products of enrichment by the higher temperature hydrothermal activity. Copyright © 2006 John Wiley & Sons, Ltd. [source]

Evidence for two episodes of volcanism in the Bigadiç borate basin and tectonic implications for western Turkey

GEOLOGICAL JOURNAL, Issue 5 2005
Fuat Erkül
Abstract Western Turkey has been dominated by N,S extension since the Early Miocene. The timing and cause of this N,S extension and related basin formation have been the subject of much debate, but new data from the Bigadiç borate basin provide insights that may solve this controversy. The basin is located in the Bornova Flysch Zone, which is thought to have formed as a major NE-trending transform zone during Late Cretaceous-Palaeocene collisional Tethyan orogenesis and later reactivated as a transfer zone of weakness, and which separates two orogenic domains having different structural evolutions. Volcanism in the Bigadiç area is characterized by two rock units that are separated by an angular unconformity. These are: (1) the Kocaiskan volcanites that gives K/Ar ages of 23,Ma, and (2) the Bigadiç volcano-sedimentary succession that yields ages of 20.6 to 17.8,Ma. Both units are unconformably overlain by Upper Miocene-Pliocene continental deposits. The Kocaiskan volcanites are related to the first episode of volcanic activity and comprise thick volcanogenic sedimentary rocks derived from subaerial andesitic intrusions, domes, lava flows and pyroclastic rocks. The second episode of volcanic activity, represented by basaltic to rhyolitic lavas and pyroclastic rocks, accompanied lacustrine,evaporitic sedimentation. Dacitic to rhyolitic volcanic rocks, called the S,nd,rg, volcanites, comprise NE-trending intrusions producing lava flows, ignimbrites, ash-fall deposits and associated volcanogenic sedimentary rocks. Other NE-trending olivine basaltic (Gölcük basalt) and trachyandesitic (Kay,rlar volcanites) intrusions and lava flows were synchronously emplaced into the lacustrine sediments. The intrusions typically display peperitic rocks along their contacts with the sedimentary rocks. It is important to note that the Gölcük basalt described here is the first recorded Early Miocene alkali basalt in western Turkey. The oldest volcanic episode occurred in the NE-trending zone when the region was still experiencing N,S compression. The angular unconformity between the two volcanic episodes marks an abrupt transition from N,S collision-related convergence to N,S extension related to retreat of the Aegean subduction zone to the south along an extensional detachment. Thrust faults with top-to-the-north sense of shear and a series of anticlines and synclines with subvertical NE-striking axial planes observed in the Bigadiç volcano-sedimentary succession suggest that NW,SE compression was reactivated following sedimentation. Geochemical data from the Bigadiç area also support the validity of the extensional regime, which was characterized by a bimodal volcanism related to extrusion of coeval alkaline and calc-alkaline volcanic rocks during the second volcanic episode. The formation of alkaline volcanic rocks dated as 19.7,±,0.4,Ma can be related directly to the onset of the N,S extensional regime in western Turkey. Copyright © 2005 John Wiley & Sons, Ltd. [source]

Origin, age and petrogenesis of Neoproterozoic composite dikes from the Arabian-Nubian Shield, SW Jordan

GEOLOGICAL JOURNAL, Issue 2 2004
G. Jarrar
Abstract The evolution of a Pan-African (c. 900,550,Ma) suite of composite dikes, with latite margins and rhyolite interiors, from southwest Jordan is discussed. The dikes cut the Neoproterozoic calc-alkaline granitoids and high-grade metamorphic rocks (c. 800,600,Ma) of the northern Arabian-Nubian Shield in Jordan and have been dated by the Rb-Sr isochron method at 566±7,Ma. The symmetrically distributed latite margins constitute less than one-quarter of the whole dike thickness. The rhyolite intruded a median fracture within the latite, while the latter was still hot but completely solidified. The dikes are alkaline and bimodal in composition with a gap in SiO2 between 61 and 74,wt%. Both end members display similar chondrite-normalized rare earth element patterns. The rhyolites display the compositional signature of A-type granites. The (La/Lu)N values are 6.02 and 4.91 for latites and rhyolites, respectively, and the rhyolites show a pronounced negative Eu anomaly, in contrast to the slight negative Eu anomaly of the latites. The chemical variability (e.g. Zr/Y, Zr/Nb, K/Rb) within and between latites and rhyolites does not support a fractional crystallization relationship between the felsic and mafic members of the dikes. We interpret the magma genesis of the composite dikes as the result of intrusion of mantle-derived mafic magma into the lower crust in an extensional tectonic regime. The mafic magma underwent extensive fractional crystallization, which supplied the necessary heat for melting of the lower crust. The products of the initial stages of partial melting (5,10%) mixed with the fractionating mafic magma and gave rise to the latite melts. Further partial melting of the lower crust (up to 30%) produced a felsic melt, which upon 50% fractional crystallization (hornblende 15%, biotite 5%, feldspars 60%, and quartz 20%) gave rise to the rhyolitic magma. Copyright © 2004 John Wiley & Sons, Ltd. [source]

Extremely Alkaline (pH > 12) Ground Water Hosts Diverse Microbial Community

Thirty-kilodalton Tat-interacting protein suppresses tumor metastasis by inhibition of osteopontin transcription in human hepatocellular carcinoma,

HEPATOLOGY, Issue 1 2008
Jian Zhao
It has been previously demonstrated that the 30-kDa Tat-interacting protein (TIP30) plays an important role in the suppression of hepatocarcinogenesis by acting as a tumor suppressor. Here we report that TIP30 suppresses metastasis of hepatocellular carcinoma (HCC) through inhibiting the transcription of osteopontin (OPN), a key molecule in the development of tumor metastasis. The expression of TIP30 messenger RNA was reverse to that of OPN messenger RNA in HCC cell lines. Ectopic expression of TIP30 greatly suppressed OPN expression, inhibited invasion of HCC cells through extracellular matrix (ECM) and adhesion with fibronectin in vitro, whereas down-regulation of TIP30 by RNA-mediated interference enhanced OPN expression and promoted metastatic abilities of HCC cells in vitro. Moreover, overexpression of TIP30 significantly inhibited the growth and lung metastases of HCC cells in nude mice. In contrast, down-regulation of TIP30 greatly promoted tumor cell growth and metastases in vivo. TIP30 repressed OPN transcription through interaction with Ets-1 and suppressed the transcriptional activity of Ets-1 and synergistic actions of Ets-1 and alkaline phosphatase-1. Thus, TIP30 may act as an Ets-1 modulator and inhibit tumor metastasis through abrogating Ets-1,dependent transcription. Moreover, expression of TIP30 was inversely associated with OPN expression in HCC tissue samples as detected by immunohistochemistry assay. Conclusion: Our results reveal a novel pathway by which OPN and possibly other Ets-1 target genes involved in tumor metastasis are regulated by TIP30 and elucidate a mechanism for metastasis promoted by TIP30 deficiency. (HEPATOLOGY 2008.) [source]

Characterization of the proteases in the midgut of the xylophagous larvae of Oemona hirta (Coleoptera: Cerambycidae)

INSECT SCIENCE, Issue 5 2009
Brian David Shaw
Abstract, The protein digestive capability of the larvae of the longhorn beetle (Oemona hirta, Coleoptera: Cerambycidae, Fabricius, 1775) was investigated. This species feeds only on wood where there is a high proportion of vascular tissue. The pH of the midgut, the major digestive organ, was alkaline and protein hydrolysis was maximal at alkaline pH. Use of specific synthetic peptide substrates showed that the major protease activities were the endopeptidases, trypsin and chymotrypsin-like activity, and the exopeptidase, leucine aminopeptidase and the pH curves corresponded to that with protein substrate. Studies using a range of serine protease inhibitors as well as specific inhibitors of metalloproteases, cysteine proteases and aspartate proteases confirmed a serine protease-based digestive system similar to earlier reports of sapwood-feeding Cerambycids. Control of these insect pests using protease inhibitors is discussed. [source]

Haemoglobin Etobicoke, an incidental finding in an Irish diabetic

INTERNATIONAL JOURNAL OF LABORATORY HEMATOLOGY, Issue 4 2003
D. A. O'Brien
Summary It is well recognized that haemoglobin variants can be detected during the measurement of HbA1c by high-performance liquid chromatography (HPLC). A number of variants have been reported as compromising the quantification of HbA1c, a marker used in the assessment of glycaemic control in diabetes. We describe a case of haemoglobin Etobicoke, a rare alpha chain variant detected in an Irish diabetic during HbA1c analysis. Its identity was confirmed using a series of investigations. These included haemoglobin electrophoresis at alkaline and acid pH, isoelectric focusing and globin chain electrophoresis. Ultimately mass spectrometry isolated the mutation at position alpha 84 (F5). Haemoglobin Etobicoke, first described in Canada in 1969 has not previously been detected on HbA1c analysis. In the presence of this rare variant, HbA1c, a standard method using HPLC to assess glycaemic control in diabetes is unreliable and alternatives such as fructosamine need to be considered. HbA1c measured by automated HPLC will effectively screen populations where haemoglobin variants were not previously known. Precise identity of these variants when they are detected is crucial to the reliable interpretation of HbA1c analyses. [source]

Ground states of BeC and MgC: A comparative multireference Brillouin,Wigner coupled cluster and configuration interaction study,

INTERNATIONAL JOURNAL OF QUANTUM CHEMISTRY, Issue 5 2005
Vasilios I. Teberekidis
Abstract The competing X3,, and 5,, states of the experimentally unknown alkaline,earth metal carbides BeC and MgC are examined with the multireference Brillouin,Wigner coupled cluster method restricted to single and double excitations (MRBW-CCSD). The results are compared against the traditional single-reference CCSD approach, as well as with other single and multireference methods. In both molecules, the CCSD 5,, , X3,, energy difference is underestimated, leading to an "erroneous" ground-state prediction in BeC. The MRBW-CCSD method corrects this anomalous behavior, leading to fair agreement with multireference configuration interaction (MR-CI) predictions. Our results at the highest levels of theory are extrapolated to the basis set limit, and the core/valence correlation is taken into account, leading to very accurate energetics and spectroscopic constants in both carbides. © 2004 Wiley Periodicals, Inc. Int J Quantum Chem, 2005 [source]

Chemical bonding in ternary magnesium hydrides

INTERNATIONAL JOURNAL OF QUANTUM CHEMISTRY, Issue 3 2003
Emilio Orgaz
Abstract The electronic structure of various alkali and alkaline,earth magnesium-based hydrides was investigated in detail. These types of crystalline compounds show MgH4 or MgH6 units ordered within a light-metal framework. We investigated the nature of the chemical bonding in these units by means of quantum chemical calculations of several related clusters. The properties of the charge density of the clusters, within the framework of the theory of atoms in molecules, was analyzed. A further set of computations of the band structure of the solid hydrides was conducted using a state-of the-art density functional-based method and the mechanism of stabilization of the MgH units is discussed. It was found that the properties obtained at the molecular level correlate well with those of the solid crystals, indicating the molecular nature of the extended systems in which the units MgHx, x = 4, 6, are stabilized by means of MgH closed-shell interactions. © 2003 Wiley Periodicals, Inc. Int J Quantum Chem 94: 150,164, 2003 [source]

Degradation of aramid fibers under alkaline and neutral conditions: Relations between the chemical characteristics and mechanical properties

JOURNAL OF APPLIED POLYMER SCIENCE, Issue 5 2010
G. Derombise
Abstract Aramid fibers are high-performance materials that have been used in various applications such as heat and cut protection, composites, rubber reinforcement, ropes and cables, and fabrics; today their use is proposed in geotextiles for alkaline ground reinforcement, and they have been used in cables for marine applications for a few years. However, there is a lack of experience with the long-term behavior of aramid fibers in wet and alkaline environments. Aging studies were therefore performed on Twaron 1000 fibers under different conditions (sea water, deionized water, pH 9, and pH 11). Hydrolytic degradation was evaluated with Fourier transform infrared and viscosimetry measurements, which were correlated with tensile test measurements. The tensile strength followed a logarithmic evolution with the aging time, whereas the modulus remained constant. A linear relation between the tensile strength and the reduced viscosity of the hydrolytically aged fibers is highlighted. Aging indicators are proposed that allow the hydrolytic degradation to be quantified. © 2010 Wiley Periodicals, Inc. J Appl Polym Sci, 2010 [source]

Reduction of intracellular pH inhibits constitutive expression of Cyclooxygenase-2 in human colon cancer cells

JOURNAL OF CELLULAR PHYSIOLOGY, Issue 2 2004
Daniela Pirkebner
Cyclooxygenase-2 (COX-2) over-expression is critically involved in tumor formation. Intracellular pH (pHi) has been shown to be alkaline in cancer cells, and to be an important trigger for cell proliferation. This study therefore analyzed the relationship between pHi and COX-2 expression. HRT-18 and Caco-2 cells cultured in medium with bicarbonate maintained a pHi of ,7.6, which is higher than that of non-neoplastic cells. Cells grown in bicarbonate-free medium with a pH at 6.8 showed a reduction in pHi to approximately 7.0. Importantly, reduction of pHi resulted in a complete inhibition of COX-2 mRNA and protein expression. When cells were grown in bicarbonate-supplemented medium at pH 6.8, pHi maintained at ,7.6 and COX-2 expression was not inhibited. Additionally, analysis utilizing protein synthesis inhibitor cycloheximide demonstrated that pHi mediated inhibition of COX-2 mRNA expression requires de novo protein synthesis of regulatory protein(s). These data strongly suggest that an alkaline pHi is an important trigger for constitutive COX-2 expression. Defining pHi -mediated mechanisms that govern the constitutive COX-2 expression may help in developing new strategies to block COX-2 over-expression in cancer cells. J. Cell. Physiol. 198: 295,301, 2004© 2003 Wiley-Liss, Inc. [source]

Changes in immune and enzyme histochemical phenotypes of cells in the intestinal mucosa of Atlantic salmon, Salmo salar L., with soybean meal-induced enteritis

JOURNAL OF FISH DISEASES, Issue 2 2000
A M Bakke-McKellep
Extracted soybean meal (SBM) in the diet for Atlantic salmon, Salmo salar L., causes an inflammatory response in the distal intestine. The morphological changes of the epithelial cells and a characterization of the inflammatory cell infiltrate of the distal intestinal mucosa were studied using a panel of enzyme and immunohistochemical markers. The salmon (average body weight 927 g) used in the study were fed either a fishmeal-based diet (control diet) or a diet in which 30% of the fishmeal protein was replaced with SBM protein (SBM diet). In salmon fed SBM, there were markedly reduced enzyme reactivities in the distal intestinal epithelial cells, both in the brush border [5,-nucleotidase (5,N), Mg2+-ATPase, alkaline phosphatase (ALP) and leucine aminopeptidase (LAP)] and in the intracellular structures [alkaline and acid phosphatase, non-specific esterase (NSE) and alanine aminopeptidase (AAP)]. There appeared to be an increased presence of cells of monocytic lineage, including macrophages, as well as neutrophilic granulocytes and immunoglobulin (Ig) M in the lamina propria of the SBM-fed fish. The mid intestine showed little response to the diet. The results suggest that toxic/antigenic component(s) of SBM affect the differentiation of the distal intestinal epithelial cells and may help explain the reduced nutrient digestibilities previously reported in salmonids fed extracted SBM. [source]

The Green Oat Story: Possible Mechanisms of Green Color Formation in Oat Products during Cooking

JOURNAL OF FOOD SCIENCE, Issue 6 2009
D.C. Doehlert
ABSTRACT:, Consumers occasionally report greenish colors generated in their oat products when cooking in tap water. Here we have investigated pH and ferrous (Fe2+) ion as possible mechanisms for this color change. Steel-cut oat groats can turn brown-green color when cooked in alkaline conditions (pHs 9 to 12). Extraction of this color with methanol, and high-pressure liquid chromatography indicated a direct association of this color with the phenolic acid or avenanthramide content of the oat. The presence of 50 mM NaHCO3 in water will cause oat/water mixtures to turn alkaline when cooked as CO2 is driven off, generating OH, ion. Although tap water rarely, if ever, contains so much bicarbonate, bicarbonate is used as a leavening agent in baking applications. Industrial interests using baking soda or alkaline conditions during oat processing should be aware of possible off color generation. We have also found that as little as 10 ppm Fe2+ will turn oat products gray-green when cooked. The aleurone stained darker than the starchy endosperm. Other divalent cations, such as Ca2+ or Mg2+ had no effect on cooked oat color. As much as 50 ppm Fe2+ may be found in freshly pumped well water, but Fe2+ reacts quickly with oxygen and precipitates as Fe(OH)3. Thus, some freshly pumped well water may turn oats green when cooked, but if the water is left under atmospheric conditions for several hours, no discoloration will appear in the cooked oats. [source]

Detergent and Sanitizer Stresses Decrease the Thermal Resistance of Enterobacter sakazakii in Infant Milk Formula

JOURNAL OF FOOD SCIENCE, Issue 3 2008
T.M. Osaili
ABSTRACT:, This study determined the effect of acid, alkaline, chlorine, and ethanol stresses on the thermal inactivation of Enterobacter sakazakii in infant milk formula. Unstressed or stressed cells were mixed with reconstituted powdered infant milk formula (PIMF) at temperatures between 52 and 58 °C for various time periods or mixed with PIMF prior to reconstitution with hot water between 50 and 100 °C. D - and z -values were determined using liner regression analysis. In general, detergent and sanitizer stresses decreased the thermal resistance of E. sakazakii in infant milk formula. The results of this study may be of use to regulatory agencies, manufacturers, and infant caregivers to design heating processes to eliminate E. sakazakii. [source]

Polarization curves for an alkaline water electrolysis at a small pin vertical electrode to produce hydrogen,

AICHE JOURNAL, Issue 9 2010
Ph. Mandin
Abstract During two-phase electrolysis for hydrogen production, according with alkaline,water electrolysis process, there are bubbles which are created at electrodes which imply a great hydrodynamic acceleration in the normal earth gravity field and then a quite important electrical properties and electrochemical processes disturbance, for both transport and reaction. This disturbance can lead to the modification of the local current density and to anode effects for example. In this work, a model experimental set-up is studied. The vertical pine electrode of small electro active surface area is surrounded with a large surface counter electrode. The hydrogen production is performed at the working electrode and effort is focused here upon the global electrochemical cell electrical performances. The polarization curves intensity vs. applied voltage are experimentally measured and presented for different factors such as: the electro active species concentration, nature and counter electrode diameter factors. © 2010 American Institute of Chemical Engineers AIChE J, 2010 [source]

A new recovery process of carbon dioxide from alkaline carbonate solution via electrodialysis

AICHE JOURNAL, Issue 12 2009
Hiroki Nagasawa
Abstract Bipolar membrane electrodialysis is applied to CO2 recovery from alkaline carbonate solution. CO2 in flue gas is captured by an alkaline hydroxide absorbing solution to form an alkaline carbonate solution. The captured CO2 is recovered from the alkaline carbonate solution via bipolar membrane electrodialysis, and the alkaline solution is regenerated simultaneously. To reduce the power requirement for CO2 recovery, this study considers optimal design and operation. Three membrane arrangements were compared, and the results indicate the membrane arrangement comprising a bipolar membrane and cation exchange membrane is the most energy saving. With further optimization of operation conditions, the minimum power requirement for CO2 recovery was reduced to 2.1 MJ/kg-CO2 (or 2.1 GJ/t-CO2). © 2009 American Institute of Chemical Engineers AIChE J, 2009 [source]

Sensing of toxic metals through pH changes using a hybrid sorbent material: Concept and experimental validation

AICHE JOURNAL, Issue 11 2009
Prasun K. Chatterjee
Abstract This article reports a new hybrid sorbent material that is capable of detecting trace concentration of toxic metals, such as zinc, lead, copper, nickel, etc., through pH changes only. The material is essentially a composite granular material synthesized through rapid fusion of a mixture of amorphous hydrated ferric oxide (HFO) and akermanite or calcium magnesium silicate (Ca2MgSi2O7). When a water sample is rapidly passed through a mini-column containing this hybrid material, effluent pH at the exit always remains alkaline (,9.0) because of slow hydrolysis of akermanite and steady release of hydroxyl (OH,) ions. This exit solution turns pink through the addition of a phenolphthalein indicator. Commonly encountered electrolytes containing sodium, calcium, chloride, and sulfate have no impact on the exit pH from the mini-column. However, when trace concentration of a heavy metal (say lead) is present in the sample water, a considerable drop in pH (>2 units) is observed for the exiting solution. At this point, the solution turns colorless through the addition of a phenolphthalein indicator. Moreover, the change in the slope of pH, i.e., ,dpH/dBV, provides a sharp, noticeable peak for each toxic metal where BV is the bed volumes of solution fed. The technique allowed detection of zinc and lead through pH swings in synthesized samples, spiked Bethlehem City water, and also in Lehigh River water in the presence of phosphate and natural organic matter (NOM). Using a simple preconcentration technique, lower than 10 ,g/l of lead was detected with a significant peak. From a mechanistic viewpoint, high sorption affinity of HFO surface sites toward toxic metal cations, ability of akermanite to maintain near-constant alkaline pH for a prolonged period through slow hydrolysis and labile metal-hydroxy complex formation causing dissipation of OH, ions from the aqueous phase provide a synergy that allows detection of toxic metals at concentrations well below 100 ,g/l through pH changes. Nearly all previous investigations pertaining to toxic metals sensing use metal-selective enzymes or organic chromophores. This simple-to-operate technique using an inexpensive hybrid material may find widespread applications in the developing world for rapid detection of toxic metals through pH changes. © 2009 American Institute of Chemical Engineers AIChE J, 2009 [source]

Defining the membrane proteome of NK cells

JOURNAL OF MASS SPECTROMETRY (INCORP BIOLOGICAL MASS SPECTROMETRY), Issue 1 2010
Dhimankrishna Ghosh
Abstract The present study was initiated to define the composition of the membrane proteome of the Natural Killer (NK) like cell line YTS. Isolated membranes were treated with reagents that have been reported to remove peripheral membrane proteins. Additional steps involving trifluoroethanol (TFE) were introduced in an effort to remove remaining nonintegral membrane proteins. This treatment resulted in the release of a subset of proteins without any apparent disruption of membrane integrity. The membranes were solubilized and digested with trypsin in 25% TFE. The resulting peptides were separated using an off-line two-dimensional reversed phase LC technique at alkaline and acidic pHs. Mass spectrometric analysis identified 1843 proteins with high confidence scores. On the basis of the presence of transmembrane regions or evidence of posttranslational modifications and prediction algorithms, approximately 40% of the identified proteins were predicted as plausible membrane proteins. The remaining species were largely involved in cellular processes and molecular functions that could be predicted to be transiently associated with membranes. The analytical approaches presented in this study offer robust generic methods for the identification and characterization of membrane proteins. These observations highlight the fact that the membrane is a dynamic entity that is composed of integral and stably associated proteins. Copyright © 2009 John Wiley & Sons, Ltd. [source]

INTERACTIONS OF THE MIX-LINKED ,-(1,3)/,-(1,4)- d -XYLANS IN THE CELL WALLS OF PALMARIA PALMATA (RHODOPHYTA),

JOURNAL OF PHYCOLOGY, Issue 1 2003
Estelle Deniaud
Algal cell wall mechanical properties, crucial for biological functions and commercial applications, rely on interactions in macromolecular assemblies. In an effort to better understand the interactions of the matrix-phase ,-(1,3)/(1,4)- d -xylan in the edible seaweed Palmaria palmata ((L.) O. Kuntze, Rhodophyta, Palmariales), sequential extractions by saline, alkaline, and chaotropic solutions were done. The chemical composition and structure and the physicochemical properties of the isolated xylan revealed that it was partly acidic, probably due to the presence of sulfate (up to 5%) and phosphate groups (up to 4%). Although such acidity suggested ionic interactions of xylan in the cell walls, the high yields of polysaccharide extracted by alkali and particularly by 8 M urea and 4.5 M guanidium thiocyanate demonstrated that it was mainly hydrogen bonded in the cell wall. H-bonds did not appear to be related to the mean proportions of ,-(1,3) and ,-(1,4)- d -xylose linkages because these did not differ between extracts of increasing alkalinity. However, the decreasing molar weight and intrinsic viscosity of extracts obtained by alkaline solution containing a reducing agent used to prevent polysaccharide degradation suggested the presence of an alkali-labile component in the xylan. These results are discussed with regard to the role of potential wall proteins as a means of control of these interactions. [source]