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Experimental Organisms (experimental + organism)
Selected AbstractsCarbohydrate and lipid digestibility of animal and vegetal ingredients and diets for the pre-adult redclaw crayfish, Cherax quadricarinatus (von Martens)AQUACULTURE RESEARCH, Issue 10 2008Alfredo Campaña-Torres Abstract In vivo carbohydrate and lipid digestibility of four animal [sardine meals 67% and 58% crude protein (CP), squid meal and red crab meal] and three vegetal (soy paste, textured wheat and sorghum meal) ingredients and diets were evaluated in experimental diets for pre-adult redclaw crayfish, Cherax quadricarinatus. A reference and seven experimental diets were formulated, including 14.5% of each ingredient in the reference diet. A single factor, completely randomized experimental design with five replicates per treatment was done. Experimental organisms were pre-adult redclaw of 10±0.8 g. The best carbohydrate digestibilities were recorded for some vegetal ingredients such as sorghum and textured wheat (93.6% and 83.9%) and the corresponding diets (90.9% and 90.8%). For animal ingredients, carbohydrate digestibilities were very poor (from 12.3% to 41.1%), and the inclusion of these ingredients diminished the digestibility of the corresponding experimental diets as compared with the reference diet (86.3,89.2% vs. 89.9%). The highest lipid digestibility corresponded to red crab meal (97.5%). Textured wheat and soy paste meal also had excellent lipid digestibility (96.4% and 95.1%). The same tendency was found for the corresponding diets. The lowest percentages were obtained with 58% crude protein sardine meal (32.9%) and its diet (86.2%). [source] Linking physiological traits to impacts on community structure and function: the role of root hemiparasitic Orobanchaceae (ex-Scrophulariaceae)JOURNAL OF ECOLOGY, Issue 1 2005G. K. PHOENIX Summary 1The hemiparasitic Orobanchaceae (ex-Scrophulariaceae) are characterized by a distinctive suite of ecophysiological traits. These traits have important impacts on host plants and non-host plants, and influence interactions with other trophic levels. Ultimately, they can affect community structure and functioning. Here, we review these physiological traits and discuss their ecological consequences. 2The root hemiparasitic Orobanchaceae form a convenient subset of the parasitic angiosperms for study because: they are the most numerous and most widely distributed group of parasitic angiosperms; their physiological characteristics have been well studied; they are important in both agricultural and (semi)natural communities; and they are tractable as experimental organisms. 3Key traits include: high transpiration rates; competition with the host for nutrients and haustorial metabolism of host-derived solutes; uptake of host-derived secondary metabolites; dual autotrophic and heterotrophic carbon nutrition; distinct carbohydrate biochemistry; high nutrient concentrations in green leaf tissue and leaf litter; and small (often hairless and non-mycorrhizal) roots. 4Impacts on the host are detrimental, which can alter competitive balances between hosts and non-hosts and thus result in community change. Further impacts may result from effects on the abiotic environment, including soil water status, nutrient cycling and leaf/canopy temperatures. 5However, for non-host species and for organisms that interact with these (e.g. herbivores and pollinators) or for those that benefit from changes in the abiotic environment, the parasites may have an overall positive effect, suggesting that at the community level, hemiparasites may also be considered as mutualists. 6It is clear that through their distinctive suite of physiological traits hemiparasitic Orobanchaceae, have considerable impacts on community structure and function, can have both competitive and positive interactions with other plants, and can impact on other trophic levels. Many community level effects of parasitic plants can be considered analogous to those of other parasites, predators or herbivores. [source] OOGAMOUS REPRODUCTION, WITH TWO-STEP AUXOSPORULATION, IN THE CENTRIC DIATOM THALASSIOSIRA PUNCTIGERA (BACILLARIOPHYTA),JOURNAL OF PHYCOLOGY, Issue 4 2006Victor A. Chepurnov Thalassiosira species are common components of marine planktonic communities worldwide and are used intensively as model experimental organisms. However, data on life cycles and sexuality within the genus are fragmentary. A clone of the cosmopolitan marine diatom Thalassiosira punctigera Cleve emend. Hasle was isolated from the North Sea and oogamous sexual reproduction was observed in culture. Cells approximately 45 ,m and smaller became sexualized. Oogonia were produced preferentially and spermatogenesis was infrequent. Unfertilized oogonia always aborted and their development was apparently arrested at prophase of meiosis I. Further progression through meiosis and auxospore formation occurred only after a sperm had penetrated into the oocyte. Many cells of the new large-celled generation (approximately 90,120 ,m in size) immediately became sexualized again but only oogonia were produced. A few of the large oogonia became auxospores and produced initial cells 132,153 ,m in diameter. The second step of auxosporulation probably involved fertilization of large-celled oocytes by the sperm of the small-celled spermatogonangia that were still present in the culture. An F1 clone obtained after selfing within the small-celled auxosporulation size range was investigated. Like the parent clone, the F1 clone was homothallic but no auxosporulation was observed: spermatogonangia were unable to produce viable sperm, apparently because of inbreeding depression. Aggregation and interaction of oogonia were documented, and may be relevant for understanding the mechanisms of signaling and recognition between sexualized cells and the evolution of sexuality in pennate diatoms. [source] Mitosis in diatoms: rediscovering an old model for cell divisionBIOESSAYS, Issue 8 2009Alessandra De Martino Abstract Diatoms are important protists that generate one fifth of the oxygen produced annually on earth. These aquatic organisms likely derived from a secondary endosymbiosis event, and they display peculiar genomic and structural features that reflect their chimeric origin. Diatoms were one of the first models of cell division and these early studies revealed a range of interesting features including a unique acentriolar microtubule-organising centre. Unfortunately, almost nothing is known at the molecular level, in contrast to the advances in other experimental organisms. Recently the full genome sequences of two diatoms have been annotated and molecular tools have been developed. These resources offer new possibilities to re-investigate the mechanisms of cell division in diatoms by recruiting information from more intensively studied organisms. A renaissance of the topic is further justified by the current interest in diatoms as a source of biofuels and for understanding massive diatom proliferation events in response to environmental stimuli. [source] Mixture Generalized Linear Models for Multiple Interval Mapping of Quantitative Trait Loci in Experimental CrossesBIOMETRICS, Issue 2 2009Zehua Chen Summary Quantitative trait loci mapping in experimental organisms is of great scientific and economic importance. There has been a rapid advancement in statistical methods for quantitative trait loci mapping. Various methods for normally distributed traits have been well established. Some of them have also been adapted for other types of traits such as binary, count, and categorical traits. In this article, we consider a unified mixture generalized linear model (GLIM) for multiple interval mapping in experimental crosses. The multiple interval mapping approach was proposed by Kao, Zeng, and Teasdale (1999, Genetics152, 1203,1216) for normally distributed traits. However, its application to nonnormally distributed traits has been hindered largely by the lack of an efficient computation algorithm and an appropriate mapping procedure. In this article, an effective expectation,maximization algorithm for the computation of the mixture GLIM and an epistasis-effect-adjusted multiple interval mapping procedure is developed. A real data set, Radiata Pine data, is analyzed and the data structure is used in simulation studies to demonstrate the desirable features of the developed method. [source] | ||||||||||