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Complete Basis Set (complete + basis_set)
Selected AbstractsComplete basis set extrapolations of dispersion, exchange, and coupled-clusters contributions to the interaction energy: a helium dimer study,INTERNATIONAL JOURNAL OF QUANTUM CHEMISTRY, Issue 12 2008gorzata Jeziorska Abstract Effectiveness of various extrapolation schemes in predicting complete basis set (CBS) values of interaction energies has been investigated for the helium dimer as a function of interatomic separation R. The investigations were performed separately for the leading dispersion and exchange contributions to the interaction energy and for the interaction energy computed using the coupled cluster method with single and double excitations (CCSD). For all these contributions, practically exact reference values were obtained from Gaussian-type geminal calculations. Sequences of orbital basis sets augmented with diffuse and bond functions or augmented with two sets of diffuse functions have been employed, with the cardinal numbers up to X = 7. The functional form EX = ECBS + A(X , k),, was applied for the extrapolations, where EX is the contribution to the interaction energy computed with a basis set of cardinal number X. The main conclusion of this work is that CBS extrapolations of an appropriate functional form generally improve the accuracy of the interaction energies at a very small additional computational cost (of the order of 10%) and should be recommended in calculations of interatomic and intermolecular potentials. The effectiveness of the extrapolations significantly depends, however, on the interatomic separation R and on the composition of the basis set. Basis sets with midbond functions, well known to provide at a given size much more accurate nonextrapolated results than bases lacking such functions, have been found to perform best also in extrapolations. The X,1 extrapolations of dispersion energies computed with midbond function turned out to be very efficient (except at large R), reducing the errors by an order of magnitude for small X and a factor of two for large X (where the errors of nonextrapolated results are already very small). If midbond functions are not used, the X,3 formula is most appropriate for the dispersion energies. For the exchange component of the interaction energy, the best results are obtained,in both types of basis sets,with the X,4 extrapolation, which leads (in both cases) to almost an order of magnitude reduction of the error. The X,3 and (X , 1),3 extrapolations work also well, but give smaller improvements. The correlation component of the CCSD interaction energy extrapolates best with , between 2 and 3 for bases with midbond functions and between 3 and 4 for bases without such functions. © 2008 Wiley Periodicals, Inc. Int J Quantum Chem, 2008 [source] Gibbs energy of activation for thermal isomerization of (1Z)-acetaldehyde hydrazone and (1Z)-acetaldehyde N,N-dimethylhydrazone by Gaussian-4 theory and CCSD(T)/CBS computationsJOURNAL OF COMPUTATIONAL CHEMISTRY, Issue 14 2009Shih-I Lu Abstract In this article, we examined the Gibbs energy of activation for the Z/E thermal isomerization reaction of (1Z)-acetaldehyde hydrazone and (1Z)-acetaldehyde N,N-dimethylhydrazone, at 298.15 K in the solvent of cyclohexane. We carried out computations employing both the Gaussian-4 (G4) theory and the coupled cluster method using both single and double substitutions and triple excitations noniteratively, CCSD(T). The CCSD(T) energy is extrapolated to the complete basis set (CBS). We compared the calculated results to the available experimental observation. It appeared that both G4 and CCSD(T)/CBS computations overestimated the experimental value by as much as about 6 and 12 kcal/mol in the present two cases. We discussed possible sources of error and proposed the experimental kinetic data could be questionable. © 2009 Wiley Periodicals, Inc. J Comput Chem, 2009 [source] Molecular dynamics simulations of fluid methane properties using ab initio intermolecular interaction potentialsJOURNAL OF COMPUTATIONAL CHEMISTRY, Issue 12 2009Shih-Wei Chao Abstract Intermolecular interaction energy data for the methane dimer have been calculated at a spectroscopic accuracy and employed to construct an ab initio potential energy surface (PES) for molecular dynamics (MD) simulations of fluid methane properties. The full potential curves of the methane dimer at 12 symmetric conformations were calculated by the supermolecule counterpoise-corrected second-order Møller-Plesset (MP2) perturbation theory. Single-point coupled cluster with single and double and perturbative triple excitations [CCSD(T)] calculations were also carried out to calibrate the MP2 potentials. We employed Pople's medium size basis sets [up to 6-311++G(3df, 3pd)] and Dunning's correlation consistent basis sets (cc-pVXZ and aug-cc-pVXZ, X = D, T, Q). For each conformer, the intermolecular carbon,carbon separation was sampled in a step 0.1 Å for a range of 3,9 Å, resulting in a total of 732 configuration points calculated. The MP2 binding curves display significant anisotropy with respect to the relative orientations of the dimer. The potential curves at the complete basis set (CBS) limit were estimated using well-established analytical extrapolation schemes. A 4-site potential model with sites located at the hydrogen atoms was used to fit the ab initio potential data. This model stems from a hydrogen,hydrogen repulsion mechanism to explain the stability of the dimer structure. MD simulations using the ab initio PES show quantitative agreements on both the atom-wise radial distribution functions and the self-diffusion coefficients over a wide range of experimental conditions. © 2008 Wiley Periodicals, Inc. J Comput Chem 2009 [source] A comparison of quantum chemical models for calculating NMR shielding parameters in peptides: Mixed basis set and ONIOM methods combined with a complete basis set extrapolationJOURNAL OF COMPUTATIONAL CHEMISTRY, Issue 7 2006Seongho Moon Abstract This article compares several quantum mechanical approaches to the computation of chemical shielding tensors in peptide fragments. First, we describe the effects of basis set quality up to the complete basis set (CBS) limit and level of theory (HF, MP2, and DFT) for four different atoms in trans N -methylacetamide. For both isotropic shielding and shielding anisotropy, the MP2 results in the CBS limit show the best agreement with experiment. The HF values show quite a different tendency to MP2, and even in the CBS limit they are far from experiment for not only the isotropic shielding of carbonyl carbon but also most shielding anisotropies. In most cases, the DFT values differ systematically from MP2, and small basis-set (double- or triple-zeta) results are often fortuitously in better agreement with the experiment than the CBS ones. Second, we compare the mixed basis set and ONIOM methods, combined with CBS extrapolation, for chemical shielding calculations at a DFT level using various model peptides. From the results, it is shown that the mixed basis set method provides better results than ONIOM, compared to CBS calculations using the nonpartitioned full systems. The information studied here will be useful in guiding the selection of proper quantum chemical models, which are in a tradeoff between accuracy and cost, for shielding studies of peptides and proteins. © 2006 Wiley Periodicals, Inc. J Comput Chem 27: 825,836, 2006 [source] Complete basis set prediction of methanol isotropic nuclear magnetic shieldings and indirect nuclear spin,spin coupling constants (SSCC) using polarization-consistent and XZP basis sets and B3LYP and BHandH density functionalsMAGNETIC RESONANCE IN CHEMISTRY, Issue 8 2009Teobald Kupka Abstract Efficient B3LYP and BHandH density functionals were used to estimate methanol's nuclear magnetic isotropic shieldings and spin,spin coupling constants in the basis set limit. Polarization-consistent pcS- n and pcJ- n (n = 0, 1, 2, 3 and 4), and segmented contracted XZP, where X = D, T, Q and 5, basis sets were used and the results fitted with simple mathematical formulas. The performance of the methods was assessed from comparison with experiment and higher level calculations. 1J(CH) and 3J(HH) values were determined from very diluted solutions in deuterochloroform and compared with theoretical predictions. The agreement between complete basis set (CBS) density functional theory (DFT) predicted isotropic shieldings and spin,spin values and experiment was good. The BHandH/pcS- n methanol shieldings obtained using structures optimized at the same level of theory are approaching the accuracy of the advanced coupled-cluster-singles-doubles-approximate triples (CCSD(T)) calculations. Copyright © 2009 John Wiley & Sons, Ltd. [source] | ||||||||||