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Acid Used (acid + used)
Kinds of Acid Used Selected AbstractsCatalytic cleavage of methyl oleate or oleic acidEUROPEAN JOURNAL OF LIPID SCIENCE AND TECHNOLOGY, Issue 1 2010Angela Köckritz Abstract Different reaction pathways are discussed for the Os-catalyzed oxidation of methyl oleate and oleic acid using O2/aldehyde as oxidation system. Monomethyl azelate and pelargonic acid were the main products obtained in yields of approximately 50,70% starting from methyl oleate. Besides, varying amounts of methyl 9,10-epoxystearate and methyl 9,10-dihydroxystearate were found as by-products. Azelaic acid and pelargonic acid were obtained exclusively from oleic acid used as reactant. Some mechanistic considerations led to the conclusion that the observed products are formed in parallel reaction paths. The effective oxidant for the scission of the C=C double bond seems to be very likely an in situ formed peracid generated by Os-catalysis from O2/aldehyde. Additional investigations concerning the cleavage of oleic acid and methyl oleate with in situ formed performic acid from H2O2/formic acid corroborate this assumption. [source] Charging of tRNA with non-natural amino acids at high pressureFEBS JOURNAL, Issue 13 2006Malgorzata Giel-Pietraszuk We show a simple and reliable method of tRNA aminoacylation with natural, as well as non-natural, amino acids at high pressure. Such specific and noncognate tRNAs can be used as valuable substrates for protein engineering. Aminoacylation yield at high pressure depends on the chemical nature of the amino acid used and it is up to 10%. Using CoA, which carries two potentially reactive groups -SH and -OH, as a model compound we showed that at high pressure amino acid is bound preferentially to the hydroxyl group of the terminal ribose ring. [source] Facile and Selective Synthesis of 4-Methyl- and 4-Phenylthiosemicarbazide (=N -Methyl- and N -Phenylhydrazinecarbothioamide) Derivatives of Benzil (=1,2-Diphenylethane-1,2-dione)HELVETICA CHIMICA ACTA, Issue 11 2007David Abstract A selective synthesis of 4-methylthiosemicarbazide (=N -methylhydrazinecarbothioamide; 4a) derivatives by reaction with benzil (=1,2-diphenylethane-1,2-dione; 3) is described. The reaction conditions determined the condensation product formed. The most important factor was the acid used: in the presence of conc. HCl solution, the open-chain 2,:,1 compound 1a was exclusively obtained, whereas in the presence of 2M HCl, the cyclic 1,:,1 condensation product 2a was formed. The alcohol used, the presence of H2O, and the time of heating were additional crucial factors. The new cyclic compound 2a with a MeO group was exclusively formed when working under high-dilution conditions. The reaction with the 4-phenyl derivative 4b gave new cyclic compounds as the major products under all conditions used (Scheme). [source] Stereoselective Aldol Reactions Catalyzed by Acyclic Amino Acids in Aqueous MicellesHELVETICA CHIMICA ACTA, Issue 1 2007Dong-Sheng Deng Abstract The catalytic properties of all proteinogenic, acyclic amino acids for direct aldol reaction in H2O, assisted by various surfactants, were investigated. The basic and neutral amino acids were shown to be efficient catalysts, giving rise to good-to-excellent yields of adducts (up to 95%), with moderate-to-good diastereoselectivities (up to 86%), L -arginine being the most-effective catalyst. The syn/anti diastereoisomer ratio could be readily tuned by proper choice of the amino acid used. Also, the range of substrates that underwent the reaction was extended to less-reactive aldehydes carrying electron-donating Br substituents. [source] New ligands for the Fe(III)-mediated reverse atom transfer radical polymerization of methyl methacrylateJOURNAL OF POLYMER SCIENCE (IN TWO SECTIONS), Issue 9 2006Gang Wang Abstract A series of (di)picolinic acids and their derivates are investigated as novel complexing tridentate or bidentate ligands in the iron-mediated reverse atom transfer radical polymerization of methyl methacrylate in N,N -dimethylformamide at 100 °C with 2,2,-azobisisobutyrontrile as an initiator. The polymerization rates and polydispersity indices (1.32,1.8) of the resulting polymers are dependent on the structures of the ligands employed. Different iron complexes may be involved in iron-mediated reverse atom transfer radical polymerization, depending on the type of acid used. 1H NMR spectroscopy has been used to study the structure of the resulting polymers. Chain-extension reactions have been performed to further confirm the living nature of this catalytic system. © 2006 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 44: 2912,2921, 2006 [source] Synthesis and characterization of polyaniline doped with organic acidsJOURNAL OF POLYMER SCIENCE (IN TWO SECTIONS), Issue 8 2004Milind V. Kulkarni Abstract Spectroscopic [UV,visible and Fourier transform IR (FTIR)] and thermal properties of chemically synthesized polyanilines are found to be affected by varying the protonation media (acetic, citric, oxalic, and tartaric acid). The optical spectra show the presence of a greater fraction of fully oxidized insulating pernigraniline phase in polyaniline doped with acetic acid. In contrast, the selectivity in the formation of the conducting phase is higher in oxalic acid as a protonic acid media. The FTIR spectra of these polymers reveal a higher ratio of the relative intensities of the quinoid to benzenoid ring modes in acetic acid doped polyaniline. Scanning electron micrographs revealed a sponge-like structure derived from the aggregation of the small granules in acetic acid and oxalic acid doped polyaniline. A three-step decomposition pattern is observed in all the polymers, regardless of the protonic acid used for the doping. The second step loss related to the loss of dopant is found to be higher in the oxalic acid doped polymer. In accordance with these results the conductivity is also found to be higher in oxalic acid doped material. The temperature dependent conductivity measurements show the thermal activated behavior in all the polymers. © 2004 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 42: 2043,2049, 2004 [source] Synthesis and specific biodegradation of novel polyesteramides containing amino acid residuesJOURNAL OF POLYMER SCIENCE (IN TWO SECTIONS), Issue 9 2001Yujiang Fan Abstract Novel polyesteramides were synthesized from p -nitrophenyl esters of sebacic or adipic acids and diamines containing ,-amino acid ester groups. The optimal polymerization condition was 60 °C in N,N -dimethylformamide. The structures of these polymers were confirmed by IR and NMR. The number-average molecular weights of these polyesteramides ranged from 2280 to 23,600 (except for the polymers containing glycine residues), depending on the nature of the amino acid used. The biodegradability of the polyesteramides was investigated by in vitro hydrolysis with proteases and a lipase as catalysts in borate buffer solutions. The results indicated that the polymers containing L -phenylalanine were hydrolyzed most effectively by ,-chymotrypsin, subtilisin Carlsberg, and subtilisin BPN,. The polyesteramides containing other amino acid residues also underwent hydrolysis to different extents, reflecting the substrate specificity of the proteases. Lipase had almost no effect on the hydrolytic degradation of these polyesteramides. The polymers containing glycine residues were hardly decomposed by any of the enzymes used. © 2001 John Wiley & Sons, Inc. J Polym Sci A: Polym Chem 39: 1318,1328, 2001 [source] Assessment of the repeatability and reproducibility of hydrogen/deuterium exchange mass spectrometry measurements,RAPID COMMUNICATIONS IN MASS SPECTROMETRY, Issue 23 2008William Burkitt A system to perform automated hydrogen/deuterium exchange mass spectrometry measurements was constructed using an XYZ robotic autosampler that was capable of performing solvent manipulations and a 4.7 T Fourier transform ion cyclotron resonance (FT-ICR) mass spectrometer. The system included features such as the first demonstration of a ,dual column' high-performance liquid chromatography (HPLC) setup, and a novel digestion strategy. The performance of the system, in terms of the repeatability and reproducibility of the measurement of protein hydrogen/deuterium exchange, was assessed over a 2-month period. The sensitivity of the measurement of hydrogen exchange towards several parameters was assessed, which allowed their impact on the reproducibility to be discussed. The parameters assessed were the temperature of the HPLC columns and switching valves, the temperature of the quench solutions, the pH of the mobile phase, the pH of the quenched solution, the acid used in the mobile phase and the analytical column used. Copyright © 2008 John Wiley & Sons, Ltd. [source] Citric acid traps to replace sulphuric acid in the ammonia diffusion of dilute water samples for 15N analysisRAPID COMMUNICATIONS IN MASS SPECTROMETRY, Issue 4 2006Patrick Schleppi The analysis of 15N in aqueous samples requires the concentration of dissolved nitrogen (N) into a small volume that can be analysed by mass spectrometry. This is conveniently achieved by the NH3 diffusion technique, where NH is captured on small acidified filters enclosed in PTFE. NO can be analysed the same way by reducing it to NH with Devarda's alloy. H2SO4 is commonly used for the acidification of the filters. During combustion, however, this acid leads to the production of SO2 and elemental sulphur, which both have detrimental effects on the mass spectrometer. We propose here to replace H2SO4 with citric acid because it is combusted completely to CO2 and H2O in the elemental analyser before entering the mass spectrometer. Citric acid was found to give comparable results in terms of N recovery and 15N values, both for NH and for NO samples. Blank samples revealed that N contamination was slightly lower using citric instead of sulphuric acid as acidifier of the glass filters. NH samples first concentrated over cation-exchange columns were strongly acidic and several methods were tested to raise the pH for the subsequent diffusion. These samples gave incomplete N recoveries, but this problem was independent of the acid used on the filters and of the final pH of the sample. Complete recovery was achieved only by increasing the volume of the eluate from the columns. Citric acid can thus generally be recommended instead of H2SO4 for ammonia diffusion. Copyright © 2006 John Wiley & Sons, Ltd. [source] Flavonol composition of Australian red and white wines determined by high-performance liquid chromatographyAUSTRALIAN JOURNAL OF GRAPE AND WINE RESEARCH, Issue 3 2008D.W. JEFFERY Abstract Background and Aims:, Flavonols are present in Vitis vinifera L. wine grapes as glycosides and are found in wines in both their glycosidic and aglycone forms. Flavonols and their glycosides are important components in wine because of their impact on colour, taste and health properties. An assessment of the flavonols and flavonol glycosides present in a wide selection of Australian red and white wines (n = 121 and 44, respectively) was undertaken. Methods and Results:, Analyses were performed using HPLC, with compound identification being aided by HPLC-MS. In the red wines, quercetin and myricetin dominated the flavonol profile, and quercetin-3-glucuronide was by far the most abundant glycoside present. White wines had considerably lower levels of flavonols and their glycosides, in most cases, being below the detection limit of the HPLC method. Conclusions:, There appeared to be no correlation between the flavonol profile and wine variety or region in either white or red wines. Contrary to literature reports of rutin in wine, rutin was not found in any of the wines we analysed, and spiking experiments showed rutin rapidly degraded to the aglycone quercetin. Furthermore, changes in elution order for some quercetin glycoside standards were observed depending upon the acid used in the mobile phase. Significance of the Study:, This is the first time the flavonol contents of an extensive cross section of Australian wines have been reported. The concentrations are consistent with those reported in wines from other countries. In light of the instability of rutin in wine, critical review should be given to reports discussing its presence. [source] Enantioselective Synthesis of l -Homophenylalanine by Whole Cells of Recombinant Escherichia coli Expressing l -Aminoacylase and N -Acylamino Acid Racemase Genes from Deinococcus radiodurans BCRC12827BIOTECHNOLOGY PROGRESS, Issue 6 2006Shih-Kuang Hsu l -Homophenylalanine (l -HPA) is a chiral unnatural amino acid used in the synthesis of angiotensin converting enzyme inhibitors and many pharmaceuticals. To develop a bioconversion process with dynamic resolution of N -acylamino acids for the l -HPA production, N -acylamino acid racemase (NAAAR) and l -aminoacylase (LAA) genes were cloned from Deinococcus radiodurans BCRC12827 and expressed in Escherichia coli XLIBlue. The recombinant enzymes were purified by nickel-chelate chromatography, and their biochemical properties were determined. The NAAAR had high racemization activity toward chiral N -acetyl-homophenylalanine (NAc-HPA). The LAA exhibited strict l -enantioselection to hydrolyze the NAc- l -HPA. A stirred glass vessel containing transformed E. coli cells expressing D. radiodurans NAAAR and LAA was used for the conversion of NAc- d -HPA to l -HPA. Unbalance activities of LAA and NAAAR were found in E. coli cell coexpressing laa and naaar genes, which resulted in the accumulation of an intermediate, NAc- l -HPA, in the early stage of conversion and a low productivity of 0.83 mmol l -HPA/L h. The results indicated that low activity of LAA present in the biomass is the rate-limiting factor in l -HPA production. In the case of two whole cells with separately expressed enzyme, the enzymatic activities of LAA and NAAAR could be balanced by changing the loading of individual cells. When the activities of two enzymes were fixed at 3600 U/L, 99.9% yield of l -HPA could be reached in 1 h, with a productivity of 10 mmol l -HPA/L h. The cells can be reused at least six cycles at a conversion yield of more than 96%. This is the first NAAAR/LAA process using NAc-HPA as substrate and recombinant whole cells containing Deinococcus enzymes as catalysts for the production of l -HPA to be reported. [source] Macrophages transfer [14C]-labelled fatty acids to pancreatic islets in cultureCELL BIOCHEMISTRY AND FUNCTION, Issue 1 2001J. R. Garcia Jr. Abstract Macrophages are able to produce, export, and transfer fatty acids to lymphocytes in culture. The purpose of this study was to examine if labelled fatty acids could be transferred from macrophages to pancreatic islets in co-culture. We found that after 3,h of co-culture the transfer of fatty acids to pancreatic islets was: arachidonic , oleic > linoleic,=,palmitic. Substantial amounts of the transferred fatty acids were found in the phospholipid fraction; 87.6% for arachidonic, 59.9% for oleic, 53.1% for palmitic, and 36.9% for linoleic acids. The remaining radioactivity was distributed among the other lipid fractions analysed (namely polar lipids, cholesterol, fatty acids, triacylglycerol and cholesterol ester), varying with the fatty acid used. For linoleic acid, a significant proportion (63.1%) was almost equally distributed in these lipid fractions. Also, it was observed that transfer of fatty acids from macrophages to pancreatic islets is time-dependent up to 24,h, being constant and linear with time for palmitic acid and remaining constant after 12,h for oleic acid. These results lead us to postulate that in addition to the serum, circulating monocytes may also be a source of fatty acids to pancreatic islets, mainly arachidonic acid. Copyright © 2001 John Wiley & Sons, Ltd. [source] Enantioselective Fluorescence Sensing of Amino Acids by Modified Cyclodextrins: Role of the Cavity and Sensing MechanismCHEMISTRY - A EUROPEAN JOURNAL, Issue 11 2004Sara Pagliari Dr. Abstract Two selectors based on modified cyclodextrins containing a metal binding site and a dansyl fluorophore,6-deoxy-6- N -(N, -[(5-dimethylamino-1-naphthalenesulfonyl)aminoethyl]phenylalanylamino-,-cyclodextrin,containing D -Phe (3) and L -Phe (4) moieties were synthesized. The conformations of the two selectors were studied by circular dichroism, two-dimensional NMR spectroscopy and time-resolved fluorescence spectroscopy. Cyclodextrin 4 was found to have a predominant conformation in which the dansyl group is self-included in the cyclodextrin cavity, while 3 showed a larger proportion of the conformation with the dansyl group outside the cavity. As a consequence, the two cyclodextrins were found to bind copper(II) with different affinities, as revealed by fluorescence quenching in competitive binding measurements. Addition of D - or L -amino acids induced increases in fluorescence intensity, which were dependent on the amino acid used and in some cases on its absolute configuration. The cyclodextrin 4 was found to be more enantioselective than 3, suggesting that the self-inclusion in the cyclodextrin cavity strongly increases the chiral discrimination ability of the copper(II) complex. Accordingly, a linear fluorescent ligand N, -[(5-dimethylamino-1-naphthalenesulfonyl)aminoethyl]- N1 -propyl-phenylalaninamide, which has the same binding site and absolute configuration as 4, showed very low chiral discrimination ability. The enantioselectivity in fluorescence response was found to be due to the formation of diastereomeric ternary complexes, which were detected by ESI-MS and by circular dichroism. Time-resolved fluorescence studies showed that the fluorescence of the dansyl group was completely quenched in the ternary complexes formed, and that the residual fluorescence was due to uncomplexed ligand. [source] Systemic tetracycline delays degradation of three different collagen membranes in rat calvariaCLINICAL ORAL IMPLANTS RESEARCH, Issue 2 2009Ofer Moses Abstract Objectives: The aim of this study was to quantitatively evaluate the effect of systemic tetracycline (TTC) on the degradation of three different collagen membranes. Materials and methods: Collagen membranes were cut into 5 mm diameter membrane discs and labeled with aminohexanoyl-biotin- N -hydroxy-succinimide ester. One membrane disc each of a non-cross-linked [BioGide® (BG)], glutaraldehyde cross-linked [BioMend Extend® (BM)], and ribose cross-linked [OssixÔ (OS)] was implanted on the calvaria of 40 Wistar rats. Another 10 biotinylated collagen membrane discs from each membrane type were processed for histologic observation and served as baseline; half of them (five from each group) were also treated with formic acid to inspect possible interference with biotinilazation of collagen by formic acid used during the decalcification process. A 10 mg/kg dose of TTC (50% of the minimal recommended antibacterial dose) to the experimental (20 animals) and saline to the control (20 animals) group was administered intramuscularly every 3 days. From each group, block sections were retrieved in half of the animals after 14 days and in the remaining after 28 days. Decalcified tissue histology was stained with streptavidin horseradish peroxidase. A computer-assisted program measured the membranes' collagen contents. Statistical analysis consisted of analysis of variance (ANOVA) with repeated measures. Results: No statistically significant differences in collagen contents were appreciated between biotinylated non-implanted membranes treated or not treated by formic acid. Systemic TTC had a different effect on the bio-degradation of the membranes: while it significantly decreased the resorption of two of the membranes (BG and BM), it had minimal influence on the ribose cross-linked membrane (OS). ANOVA with repeated measures, tests of within-subjects effects, showed a statistically significant difference between the membranes (P<0.001), within the membranes at the different time-points (P<0.001), a significant interaction between membranes and time and between the membranes and administered TTC (P<0.001). Test of between-subject effects revealed a statistically significant interaction with time and with TTC (P<0.001). Conclusions: Systemically administered TTC in sub-antibacterial doses may offer a possible treatment alternative to reduce bio-degradation and enhance bio-durability of certain collagen membranes. The findings of the present study could have clinical application in large non-self-contained bone defects, where prolonged membrane barrier functions are desirable. [source] Fatty acid incorporation in endothelial cells and effects on endothelial nitric oxide synthaseEUROPEAN JOURNAL OF CLINICAL INVESTIGATION, Issue 9 2007S. Couloubaly Abstract Background The nature of fatty acids provided by the diet as well as plasma lipid metabolism can modify the composition and properties of plasma membrane and thus the activity of membrane proteins. In humans, as well as in experimental models, diabetes is associated with both an alteration in serum lipid profile and a documented endothelial dysfunction. This in vitro study investigated on an immortalized human endothelial cell line (EA.hy 926) the specific effects of several free fatty acids (FFAs) on the composition of cellular membranes and the regulation of endothelial nitric oxide synthase (eNOS). Materials and methods 0·1% of lipid deprived serum was added to the incubation medium with 25 mm glucose in order to study the effects of individual fatty acids: myristic acid, palmitic acid, stearic acid, oleic acid or linoleic acid at 100 µm bound with albumin. The effects of the FFAs on the endothelial nitric oxide synthase were investigated on mRNA level by quantitative PCR, on protein level and Ser1177 phosphorylation by Western blot and on enzymatic activity on living cells using radiolabelled arginine. Results Free linoleic acid increased the membrane content in n-6 fatty acids (mainly C18: n-6 and its metabolites) with a decrease in saturated and monounsaturated fatty acids. These conditions decreased the basal eNOS activity and reduced the phosphorylation of eNOS-Ser1177 due to activation by histamine. Free palmitic acid enriched the membranes with 16 : 0 with a slight decrease in monounsaturated fatty acids. These conditions increased eNOS activation without increasing Ser1177 phosphorylation upon histamine activation. The addition of the other FFAs also resulted in modifications of membrane composition, which did not to affect eNOS-Ser1177 phosphorylation. Conclusion Among the fatty acids used, only modification of the membrane composition due to linoleic acid supply disturbed the basal enzymatic activity and Ser1177 phosphorylation of eNOS in a way that limited the role of histamine activation. Linoleic acid might involve the dysfunction of both eNOS basal activity and its phosphorylation status and may then contribute to an impaired vasodilatation in vivo. [source] A laser imaging and neutron reflection investigation into the monolayer behaviour of fatty acids used for taste masking microspheresJOURNAL OF PHARMACEUTICAL SCIENCES, Issue 5 2008Sheng Qi Abstract Fatty acid microspheres have been used for taste masking purposes whereby the drug is preferentially released in the lower gastrointestinal tract, although the mechanisms involved are poorly understood. In this study, we use a combination of surface pressure measurements, Brewster angle microscopy (BAM) and neutron reflectivity measurements to study the phase miscibility and escaping tendency from mixed stearic and palmitic acid films with a view to relating this to drug dissolution behaviour. It was noted that mixed systems showed considerably greater film interaction and instability than those composed of the pure lipid, especially in alkaline media. BAM studies were able to identify a range of phase separated structures for both the pure and mixed systems. Neutron reflectivity studies indicated a marked selective dissolution of palmitic acid into the subphase as a function of time and allowed quantification of the rate of dissolution of this species. It is concluded that the fatty acids are interacting within the monolayer and in addition the palmitic acid is escaping the mixed monolayers and dissolving into the alkali subphase. These findings have strong relevance for understanding the mechanism of drug release from the associated microspheres. © 2007 Wiley-Liss, Inc. and the American Pharmacists Association J Pharm Sci 97: 1864,1877, 2008 [source] Dual enantioselective Diels,Alder process in the cyclization of chiral acrylamide with dienesJOURNAL OF PHYSICAL ORGANIC CHEMISTRY, Issue 11 2004Doo Young Jung Abstract Diels,Alder cycloadditions of chiral acrylamides with cyclopentadiene or 2, 3-dimethyl butadiene proceed with high diastereofacial selectivity. Either endo-R or endo-S products have been obtained depending upon the structures of acrylamides and Lewis acids used. The endo form was exclusively obtained over the exo form. The dependence of the mechanism of formation of opposite configurations of endo-R or endo-S products on the Lewis acids is discussed. Copyright © 2004 John Wiley & Sons, Ltd. [source] Effect of intracellular lipid droplets on cytosolic Ca2+ and cell death during ischaemia,reperfusion injury in cardiomyocytesTHE JOURNAL OF PHYSIOLOGY, Issue 6 2009Ignasi Barba Lipid droplets (LD) consist of accumulations of triacylglycerols and have been proposed to be markers of ischaemic but viable tissue. Previous studies have described the presence of LD in myocardium surviving an acute coronary occlusion. We investigated whether LD may be protective against cell death secondary to ischaemia,reperfusion injury. The addition of oleate,bovine serum albumin complex to freshly isolated adult rat cardiomyocytes or to HL-1 cells resulted in the accumulation of intracellular LD detectable by fluorescence microscopy, flow cytometry and 1H-nuclear magnetic resonance spectroscopy. Simulated ischaemia,reperfusion of HL-1 cells (respiratory inhibition at pH 6.4 followed by 30 min of reperfusion) resulted in significant cell death (29.7 ± 2.6% of total lactate dehydrogenase release). However, cell death was significantly attenuated in cells containing LD (40% reduction in LDH release compared with control cells, P= 0.02). The magnitude of LD accumulation was inversely correlated (r2= 0.68, P= 0.0003) with cell death. The protection associated with intracellular LD was not a direct effect of the fatty acids used to induce their formation, because oleate added 30 min before ischaemia, during ischaemia or during reperfusion did not form LD and did not protect against cell death. Increasing the concentration of free oleate during reperfusion progressively decreased the protection afforded by LD. HL-1 cells labelled with fluo-4, a Ca2+ -sensitive fluorochrome, fluorescence within LD areas increased more throughout simulated ischaemia and reperfusion than in the cytosolic LD-free areas of the same cells. As a consequence, cells with LD showed less cytosolic Ca2+ overload than control cells. These results suggest that LD exert a protective effect during ischaemia,reperfusion by sequestering free fatty acids and Ca2+. [source] | ||||||||||||||||