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Carbon Cycle (carbon + cycle)
Kinds of Carbon Cycle Selected AbstractsThe Role of Amoeboid Protists and the Microbial Community in Moss-Rich Terrestrial Ecosystems: Biogeochemical Implications for the Carbon Budget and Carbon Cycle, Especially at Higher Latitudes,THE JOURNAL OF EUKARYOTIC MICROBIOLOGY, Issue 3 2008O. ROGER ANDERSON ABSTRACT. Moss-rich terrestrial communities are widely distributed in low- and high-latitude environments, covering vast surface areas in the boreal forests and tundra. The microbial biota in these organic-rich communities may contribute substantially to the carbon budget of terrestrial communities and the carbon cycle on a global scale. Recent research is reported on the carbon content of microbial communities in some temperate and high-latitude moss communities. The total carbon content and potential respiratory carbon dioxide (CO2) efflux is reported for bacteria, microflagellates, naked amoebae, and testate amoebae within sampling sites at a northeastern forest and the tundra at Toolik, Alaska. Quantitative models of the predicted total CO2 efflux from the microbes, based on microscopic observations and enumeration of the microbiota in samples from the research sites, are described and predictions are compared with published field-based data of CO2 efflux. The significance of the predictions for climate change and global warming are discussed. [source] Using Rock-Eval 6 pyrolysis for tracking fossil organic carbon in modern environments: implications for the roles of erosion and weatheringEARTH SURFACE PROCESSES AND LANDFORMS, Issue 2 2006Yoann Copard Abstract This work relates to the debate on the fossil organic carbon (FOC) input in modern environments and its possible implication for the carbon cycle, and suggests the use of Rock-Eval 6 pyrolysis as a relevant tool for tracking FOC in such environments. Considering that such a delivery is mainly due to supergene processes affecting the continental surface, we studied organic matter in different reservoirs such as bedrocks, alterites, soils and rivers in two experimental catchments at Draix (Alpes de Haute Provence, France). Samples were subjected to geochemical (Rock-Eval 6 pyrolysis) investigations and artificial bacterial degradations. After comparing the geochemical fingerprint of samples, geochemical markers of FOC were defined and tracked in the different reservoirs. Our results confirm the contribution of FOC in modern soils and rivers and display the various influences of weathering and erosional processes on the fate of FOC during its exchange between these pools. In addition, the contrasting behaviour of these markers upon the supergene processes has also highlighted the refractory or labile characters of the fossil organic matter (FOM). Bedrock to river fluxes, controlled by gully erosion, are characterized by a qualitative and quantitative preservation of FOM. Bedrock to alterite fluxes, governed by chemical weathering, are characterized by FOC mineralization without qualitative changes in deeper alterites. Alterite to soils fluxes, controlled by (bio)chemical weathering, are characterized by strong FOC mineralization and qualitative changes of FOM. Thus weathering and erosional processes induce different FOM evolution and affect the fate of FOC towards the global carbon cycle. In this study, gully erosion would involve maintenance of an ancient sink for the global carbon cycle, while (bio)chemical processes provide a source of CO2. Finally, this study suggests that Rock-Eval 6 pyrolysis can be considered as a relevant tool for tracking FOC in modern environments. Copyright © 2006 John Wiley & Sons, Ltd. [source] Woody plants modulate the temporal dynamics of soil moisture in a semi-arid mesquite savanna,ECOHYDROLOGY, Issue 1 2010Daniel L. Potts Abstract Climate variability and human activities interact to increase the abundance of woody plants in arid and semi-arid ecosystems worldwide. How woody plants interact with rainfall to influence patterns of soil moisture through time, at different depths in the soil profile and between neighboring landscape patches is poorly known. In a semi-arid mesquite savanna, we deployed a paired array of sensors beneath a mesquite canopy and in an adjacent open area to measure volumetric soil water content (,) every 30 min at several depths between 2004 and 2007. In addition, to quantify temporally dynamic variation in soil moisture between the two microsites and across soil depths we analysed , time-series using fast Fourier transforms (FFT). FFT analyses were consistent with the prediction that by reducing evaporative losses through shade and reducing rainfall inputs through canopy interception of small rainfall events, the mesquite canopy was associated with a decline in high-frequency (hour-to-hour and day-to-day) variation in shallow ,. Finally, we found that, in both microsites, high-frequency , variation declined with increasing soil depth as the influence of evaporative losses and inputs associated with smaller rainfall events declined. In this case, we argue that the buffering of shallow soil moisture against high-frequency variations can enhance nutrient cycling and alter the carbon cycle in dryland ecosystems. Copyright © 2009 John Wiley & Sons, Ltd. [source] Plant functional traits and soil carbon sequestration in contrasting biomesECOLOGY LETTERS, Issue 5 2008Gerlinde B. De Deyn Abstract Plant functional traits control a variety of terrestrial ecosystem processes, including soil carbon storage which is a key component of the global carbon cycle. Plant traits regulate net soil carbon storage by controlling carbon assimilation, its transfer and storage in belowground biomass, and its release from soil through respiration, fire and leaching. However, our mechanistic understanding of these processes is incomplete. Here, we present a mechanistic framework, based on the plant traits that drive soil carbon inputs and outputs, for understanding how alteration of vegetation composition will affect soil carbon sequestration under global changes. First, we show direct and indirect plant trait effects on soil carbon input and output through autotrophs and heterotrophs, and through modification of abiotic conditions, which need to be considered to determine the local carbon sequestration potential. Second, we explore how the composition of key plant traits and soil biota related to carbon input, release and storage prevail in different biomes across the globe, and address the biome-specific mechanisms by which plant trait composition may impact on soil carbon sequestration. We propose that a trait-based approach will help to develop strategies to preserve and promote carbon sequestration. [source] Magnitude and variability of process rates in fungal diversity-litter decomposition relationshipsECOLOGY LETTERS, Issue 11 2005Christian K. Dang Abstract There is compelling evidence that losses in plant diversity can alter ecosystem functioning, particularly by reducing primary production. However, impacts of biodiversity loss on decomposition, the complementary process in the carbon cycle, are highly uncertain. By manipulating fungal decomposer diversity in stream microcosm experiments we found that rates of litter decomposition and associated fungal spore production are unaffected by changes in decomposer diversity under benign and harsher environmental conditions. This result calls for caution when generalizing outcomes of biodiversity experiments across systems. In contrast to their magnitude, the variability of process rates among communities increased when species numbers were reduced. This was most likely caused by a portfolio effect (i.e. statistical averaging), with the uneven species distribution typical of natural communities tending to weaken that effect. Curbing species extinctions to maintain ecosystem functioning thus can be important even in situations where process rates are unaffected. [source] Genome sequence of Desulfobacterium autotrophicum HRM2, a marine sulfate reducer oxidizing organic carbon completely to carbon dioxideENVIRONMENTAL MICROBIOLOGY, Issue 5 2009Axel W. Strittmatter Summary Sulfate-reducing bacteria (SRB) belonging to the metabolically versatile Desulfobacteriaceae are abundant in marine sediments and contribute to the global carbon cycle by complete oxidation of organic compounds. Desulfobacterium autotrophicum HRM2 is the first member of this ecophysiologically important group with a now available genome sequence. With 5.6 megabasepairs (Mbp) the genome of Db. autotrophicum HRM2 is about 2 Mbp larger than the sequenced genomes of other sulfate reducers (SRB). A high number of genome plasticity elements (> 100 transposon-related genes), several regions of GC discontinuity and a high number of repetitive elements (132 paralogous genes Mbp,1) point to a different genome evolution when comparing with Desulfovibrio spp. The metabolic versatility of Db. autotrophicum HRM2 is reflected in the presence of genes for the degradation of a variety of organic compounds including long-chain fatty acids and for the Wood,Ljungdahl pathway, which enables the organism to completely oxidize acetyl-CoA to CO2 but also to grow chemolithoautotrophically. The presence of more than 250 proteins of the sensory/regulatory protein families should enable Db. autotrophicum HRM2 to efficiently adapt to changing environmental conditions. Genes encoding periplasmic or cytoplasmic hydrogenases and formate dehydrogenases have been detected as well as genes for the transmembrane TpII- c3, Hme and Rnf complexes. Genes for subunits A, B, C and D as well as for the proposed novel subunits L and F of the heterodisulfide reductases are present. This enzyme is involved in energy conservation in methanoarchaea and it is speculated that it exhibits a similar function in the process of dissimilatory sulfate reduction in Db. autotrophicum HRM2. [source] The dynamics of organic matter in rock fragments in soil investigated by 14C dating and measurements of 13CEUROPEAN JOURNAL OF SOIL SCIENCE, Issue 1 2002A. Agnelli Summary Rock fragments in soil can contain significant amounts of organic carbon. We investigated the nature and dynamics of organic matter in rock fragments in the upper horizons of a forest soil derived from sandstone and compared them with the fine earth fraction (<2 mm). The organic C content and its distribution among humic, humin and non-humic fractions, as well as the isotopic signatures (,14C and ,13C) of organic carbon and of CO2 produced during incubation of samples, all show that altered rock fragments contain a dynamic component of the carbon cycle. Rock fragments, especially the highly altered ones, contributed 4.5% to the total organic C content in the soil. The bulk organic matter in both fine earth and highly altered rock fragments in the A1 horizon contained significant amounts of recent C (bomb 14C), indicating that most of this C is cycled quickly in both fractions. In the A horizons, the mean residence times of humic substances from highly altered rock fragments were shorter than those of the humic substances isolated in the fine earth. Values of ,14C of the CO2 produced during basal respiration confirmed the heterogeneity, complexity and dynamic nature of the organic matter of these rock fragments. The weak 14C signatures of humic substances from the slightly altered rock fragments confirmed the importance of weathering in establishing and improving the interactions between rock fragments and surrounding soil. The progressive enrichment in 13C from components with high- 14C (more recent) to low- 14C (older) indicated that biological activity occurred in both the fine and the coarse fractions. Hence the microflora utilizes energy sources contained in all the soil compartments, and rock fragments are chemically and biologically active in soil, where they form a continuum with the fine earth. [source] Leaf litter flammability in some semi-arid Australian woodlandsFUNCTIONAL ECOLOGY, Issue 5 2006F. R. SCARFF Summary 1Wildfires strongly influence the biotic composition and carbon cycle of many ecosystems. Plant species provide the fuel for wildfires, but vary widely in their flammability. This study aimed to determine what plant characteristics control leaf litter flammability and to clarify how they are related to other functional traits. 2Litter flammability varied across 14 tree species occurring in a mosaic of five floristic associations. 3Differences in heat-release rate between species were driven by leaf size, from small-leaved conifers, casuarinas and acacias to large-leaved eucalypts and Brachychiton. 4Large leaves created an open litter-bed structure that burned more rapidly because it was better ventilated. The results on heat-release rate were partitioned according to fundamental principles for the transport of oxygen through a packed fuel bed, showing that heat-release rate scaled linearly with estimated gas-flow rates, as expected in ventilation-controlled fires. 5Species that were able to resprout after fire had litter that burned more intensely and was more likely to sustain a spreading fire than litter from obligate seeders, and were correspondingly larger-leaved. 6Many fire-prone wooded ecosystems in the region consist of large-leaved resprouting tree species co-occurring with small-leaved obligate seeders. [source] Linking the global carbon cycle to individual metabolismFUNCTIONAL ECOLOGY, Issue 2 2005A. P. ALLEN Summary 1We present a model that yields ecosystem-level predictions of the flux, storage and turnover of carbon in three important pools (autotrophs, decomposers, labile soil C) based on the constraints of body size and temperature on individual metabolic rate. 2The model predicts a 10 000-fold increase in C turnover rates moving from tree- to phytoplankton-dominated ecosystems due to the size dependence of photosynthetic rates. 3The model predicts a 16-fold increase in rates controlled by respiration (e.g. decomposition, turnover of labile soil C and microbial biomass) over the temperature range 0,30 °C due to the temperature dependence of ATP synthesis in respiratory complexes. 4The model predicts only a fourfold increase in rates controlled by photosynthesis (e.g. net primary production, litter fall, fine root turnover) over the temperature range 0,30 °C due to the temperature dependence of Rubisco carboxylation in chloroplasts. 5The difference between the temperature dependence of respiration and photosynthesis yields quantitative predictions for distinct phenomena that include acclimation of plant respiration, geographic gradients in labile C storage, and differences between the short- and long-term temperature dependence of whole-ecosystem CO2 flux. 6These four sets of model predictions were tested using global compilations of data on C flux, storage and turnover in ecosystems. 7Results support the hypothesis that the combined effects of body size and temperature on individual metabolic rate impose important constraints on the global C cycle. The model thus provides a synthetic, mechanistic framework for linking global biogeochemical cycles to cellular-, individual- and community-level processes. [source] Transfer of hydrocarbons from natural seeps to the water column and atmosphereGEOFLUIDS (ELECTRONIC), Issue 2 2002I. R. MacDonald Abstract Results from surface geochemical prospecting, seismic exploration and satellite remote sensing have documented oil and gas seeps in marine basins around the world. Seeps are a dynamic component of the carbon cycle and can be important indicators for economically significant hydrocarbon deposits. The northern Gulf of Mexico contains hundreds of active seeps that can be studied experimentally with the use of submarines and Remotely Operated Vehicles (ROV). Hydrocarbon flux through surface sediments profoundly alters benthic ecology and seafloor geology at seeps. In water depths of 500,2000 m, rapid gas flux results in shallow, metastable deposits of gas hydrate, which reduce sediment porosity and affect seepage rates. This paper details the processes that occur during the final, brief transition , as oil and gas escape from the seafloor, rise through the water and dissolve, are consumed by microbial processes, or disperse into the atmosphere. The geology of the upper sediment column determines whether discharge is rapid and episodic, as occurs in mud volcanoes, or more gradual and steady, as occurs where the seep orifice is plugged with gas hydrate. In both cases, seep oil and gas appear to rise through the water in close proximity instead of separating. Chemical alteration of the oil is relatively minor during transit through the water column, but once at the sea surface its more volatile components rapidly evaporate. Gas bubbles rapidly dissolve as they rise, although observations suggest that oil coatings on the bubbles inhibit dissolution. At the sea surface, the floating oil forms slicks, detectable by remote sensing, whose origins are laterally within ,1000 m of the seafloor vent. This contradicts the much larger distance predicted if oil drops rise through a 500 m water column at an expected rate of ,0.01 m s,1 while subjected to lateral currents of ,0.2 m s,1 or greater. It indicates that oil rises with the gas bubbles at speeds of ,0.15 m s,1 all the way to the surface. [source] The Deciduous Forest , Boreal Forest EcotoneGEOGRAPHY COMPASS (ELECTRONIC), Issue 7 2010David Goldblum Ecotones have been subject to significant attention over the past 25 years as a consensus emerged that they might be uniquely sensitive to the effects of climate change. Most ecotone field studies and modeling efforts have focused on transitions between forest and non-forest biomes (e.g. boreal forest to Arctic tundra, forest to prairie, subalpine forests to alpine tundra) while little effort has been made to evaluate or simply understand forest,forest ecotones, specifically the deciduous forest , boreal forest ecotone. Geographical shifts and changes at this ecotone because of anthropogenic factors are tied to the broader survival of both the boreal and deciduous forest communities as well as global factors such as biodiversity loss and dynamics of the carbon cycle. This review summarizes what is known about the location, controlling mechanisms, disturbance regimes, anthropogenic impacts, and sensitivity to climate change of the deciduous forest , boreal forest ecotone. [source] Molecular investigations into a globally important carbon pool: permafrost-protected carbon in Alaskan soilsGLOBAL CHANGE BIOLOGY, Issue 9 2010M. P. WALDROP Abstract The fate of carbon (C) contained within permafrost in boreal forest environments is an important consideration for the current and future carbon cycle as soils warm in northern latitudes. Currently, little is known about the microbiology or chemistry of permafrost soils that may affect its decomposition once soils thaw. We tested the hypothesis that low microbial abundances and activities in permafrost soils limit decomposition rates compared with active layer soils. We examined active layer and permafrost soils near Fairbanks, AK, the Yukon River, and the Arctic Circle. Soils were incubated in the lab under aerobic and anaerobic conditions. Gas fluxes at ,5 and 5 °C were measured to calculate temperature response quotients (Q10). The Q10 was lower in permafrost soils (average 2.7) compared with active layer soils (average 7.5). Soil nutrients, leachable dissolved organic C (DOC) quality and quantity, and nuclear magnetic resonance spectroscopy of the soils revealed that the organic matter within permafrost soils is as labile, or even more so, than surface soils. Microbial abundances (fungi, bacteria, and subgroups: methanogens and Basidiomycetes) and exoenzyme activities involved in decomposition were lower in permafrost soils compared with active layer soils, which, together with the chemical data, supports the reduced Q10 values. CH4 fluxes were correlated with methanogen abundance and the highest CH4 production came from active layer soils. These results suggest that permafrost soils have high inherent decomposability, but low microbial abundances and activities reduce the temperature sensitivity of C fluxes. Despite these inherent limitations, however, respiration per unit soil C was higher in permafrost soils compared with active layer soils, suggesting that decomposition and heterotrophic respiration may contribute to a positive feedback to warming of this eco region. [source] Enhanced terrestrial carbon uptake in the Northern High Latitudes in the 21st century from the Coupled Carbon Cycle Climate Model Intercomparison Project model projectionsGLOBAL CHANGE BIOLOGY, Issue 2 2010HAIFENG QIAN Abstract The ongoing and projected warming in the northern high latitudes (NHL; poleward of 60 °N) may lead to dramatic changes in the terrestrial carbon cycle. On the one hand, warming and increasing atmospheric CO2 concentration stimulate vegetation productivity, taking up CO2. On the other hand, warming accelerates the decomposition of soil organic matter (SOM), releasing carbon into the atmosphere. Here, the NHL terrestrial carbon storage is investigated based on 10 models from the Coupled Carbon Cycle Climate Model Intercomparison Project. Our analysis suggests that the NHL will be a carbon sink of 0.3 ± 0.3 Pg C yr,1 by 2100. The cumulative land organic carbon storage is modeled to increase by 38 ± 20 Pg C over 1901 levels, of which 17 ± 8 Pg C comes from vegetation (43%) and 21 ± 16 Pg C from the soil (8%). Both CO2 fertilization and warming enhance vegetation growth in the NHL. Although the intense warming there enhances SOM decomposition, soil organic carbon (SOC) storage continues to increase in the 21st century. This is because higher vegetation productivity leads to more turnover (litterfall) into the soil, a process that has received relatively little attention. However, the projected growth rate of SOC begins to level off after 2060 when SOM decomposition accelerates at high temperature and then catches up with the increasing input from vegetation turnover. Such competing mechanisms may lead to a switch of the NHL SOC pool from a sink to a source after 2100 under more intense warming, but large uncertainty exists due to our incomplete understanding of processes such as the strength of the CO2 fertilization effect, permafrost, and the role of soil moisture. Unlike the CO2 fertilization effect that enhances vegetation productivity across the world, global warming increases the productivity at high latitudes but tends to reduce it in the tropics and mid-latitudes. These effects are further enhanced as a result of positive carbon cycle,climate feedbacks due to additional CO2 and warming. [source] Quantifying carbon sequestration as a result of soil erosion and deposition: retrospective assessment using caesium-137 and carbon inventoriesGLOBAL CHANGE BIOLOGY, Issue 12 2007TIMOTHY ANDREW QUINE Abstract The role of soil erosion in the global carbon cycle remains a contested subject. A new approach to the retrospective derivation of erosion-induced quantitative fluxes of carbon between soil and atmosphere is presented and applied. The approach is based on the premise that soil redistribution perturbs the carbon cycle by driving disequilibrium between soil carbon content and input. This perturbation is examined by establishing the difference between measured carbon inventories and the inventories that would be found if input and content were in dynamic equilibrium. The carbon inventory of a profile in dynamic equilibrium is simulated by allowing lateral and vertical redistribution of carbon but treating all other profile inputs as equal to outputs. Caesium-137 is used to derive rates of vertical and lateral soil redistribution. Both point and field-scale estimates of carbon exchange with the atmosphere are derived using the approach for a field subject to mechanized agricultural in the United Kingdom. Sensitivity analysis is undertaken and demonstrates that the approach is robust. The results indicate that, despite a 15% decline in the carbon content of the cultivation layer of the eroded part of the field, this area has acted as a net sink of 11 ± 2 g C m,2 yr,1 over the last half century and that in the field as a whole, soil redistribution has driven a sink of 7 ± 2 g C m,2 yr,1 (6 ± 2 g C m,2 yr,1 if all eroded carbon transported beyond the field boundary is lost to the atmosphere) over the same period. This is the first empirical evidence for, and quantification of, dynamic replacement of eroded carbon. The relatively modest field-scale net sink is more consistent with the identification of erosion and deposition as a carbon sink than a carbon source. There is a clear need to assemble larger databases with which to evaluate critically the carbon sequestration potential of erosion and deposition in a variety of conditions of agricultural management, climate, relief, and soil type. In any case, this study demonstrated that the operation of erosion and deposition processes within the boundaries of agricultural fields must be understood as a key driver of the net carbon cycle consequences of cultivating land. [source] Implications of CO2 fertilization for future climate change in a coupled climate,carbon modelGLOBAL CHANGE BIOLOGY, Issue 5 2007H. DAMON MATTHEWSArticle first published online: 28 FEB 200 Abstract The terrestrial carbon cycle plays a critical role in determining levels of atmospheric CO2 that result from anthropogenic carbon emissions. Elevated atmospheric CO2 is thought to stimulate terrestrial carbon uptake, through the process of CO2 fertilization of vegetation productivity. This negative carbon cycle feedback results in reduced atmospheric CO2 growth, and has likely accounted for a substantial portion of the historical terrestrial carbon sink. However, the future strength of CO2 fertilization in response to continued carbon emissions and atmospheric CO2 rise is highly uncertain. In this paper, the ramifications of CO2 fertilization in simulations of future climate change are explored, using an intermediate complexity coupled climate,carbon model. It is shown that the absence of future CO2 fertilization results in substantially higher future CO2 levels in the atmosphere, as this removes the dominant contributor to future terrestrial carbon uptake in the model. As a result, climate changes are larger, though the radiative effect of higher CO2 on surface temperatures in the model is offset by about 30% due to reduced positive dynamic vegetation feedbacks; that is, the removal of CO2 fertilization results in less vegetation expansion in the model, which would otherwise constitute an important positive surface albedo-temperature feedback. However, the effect of larger climate changes has other important implications for the carbon cycle , notably to further weaken remaining carbon sinks in the model. As a result, positive climate,carbon cycle feedbacks are larger when CO2 fertilization is absent. This creates an interesting synergism of terrestrial carbon cycle feedbacks, whereby positive (climate,carbon cycle) feedbacks are amplified when a negative (CO2 fertilization) feedback is removed. [source] The regional variation of aboveground live biomass in old-growth Amazonian forestsGLOBAL CHANGE BIOLOGY, Issue 7 2006YADVINDER MALHI Abstract The biomass of tropical forests plays an important role in the global carbon cycle, both as a dynamic reservoir of carbon, and as a source of carbon dioxide to the atmosphere in areas undergoing deforestation. However, the absolute magnitude and environmental determinants of tropical forest biomass are still poorly understood. Here, we present a new synthesis and interpolation of the basal area and aboveground live biomass of old-growth lowland tropical forests across South America, based on data from 227 forest plots, many previously unpublished. Forest biomass was analyzed in terms of two uncorrelated factors: basal area and mean wood density. Basal area is strongly affected by local landscape factors, but is relatively invariant at regional scale in moist tropical forests, and declines significantly at the dry periphery of the forest zone. Mean wood density is inversely correlated with forest dynamics, being lower in the dynamic forests of western Amazonia and high in the slow-growing forests of eastern Amazonia. The combination of these two factors results in biomass being highest in the moderately seasonal, slow growing forests of central Amazonia and the Guyanas (up to 350 Mg dry weight ha,1) and declining to 200,250 Mg dry weight ha,1 at the western, southern and eastern margins. Overall, we estimate the total aboveground live biomass of intact Amazonian rainforests (area 5.76 × 106 km2 in 2000) to be 93±23 Pg C, taking into account lianas and small trees. Including dead biomass and belowground biomass would increase this value by approximately 10% and 21%, respectively, but the spatial variation of these additional terms still needs to be quantified. [source] Effects of nutrient additions on ecosystem carbon cycle in a Puerto Rican tropical wet forestGLOBAL CHANGE BIOLOGY, Issue 2 2006YIQING LI Abstract Wet tropical forests play a critical role in global ecosystem carbon (C) cycle, but C allocation and the response of different C pools to nutrient addition in these forests remain poorly understood. We measured soil organic carbon (SOC), litterfall, root biomass, microbial biomass and soil physical and chemical properties in a wet tropical forest from May 1996 to July 1997 following a 7-year continuous fertilization. We found that although there was no significant difference in total SOC in the top 0,10 cm of the soils between the fertilization plots (5.42±0.18 kg m,2) and the control plots (5.27±0.22 kg m,2), the proportion of the heavy-fraction organic C in the total SOC was significantly higher in the fertilized plots (59%) than in the control plots (46%) (P<0.05). The annual decomposition rate of fertilized leaf litter was 13% higher than that of the control leaf litter. We also found that fertilization significantly increased microbial biomass (fungi+bacteria) with 952±48 mg kg,1soil in the fertilized plots and 755±37 mg kg,1soil in the control plots. Our results suggest that fertilization in tropical forests may enhance long-term C sequestration in the soils of tropical wet forests. [source] Inversion of terrestrial ecosystem model parameter values against eddy covariance measurements by Monte Carlo samplingGLOBAL CHANGE BIOLOGY, Issue 8 2005Wolfgang Knorr Abstract Effective measures to counter the rising levels of carbon dioxide in the Earth's atmosphere require that we better understand the functioning of the global carbon cycle. Uncertainties about, in particular, the terrestrial carbon cycle's response to climate change remain high. We use a well-known stochastic inversion technique originally developed in nuclear physics, the Metropolis algorithm, to determine the full probability density functions (PDFs) of parameters of a terrestrial ecosystem model. By thus assimilating half-hourly eddy covariance measurements of CO2 and water fluxes, we can substantially reduce the uncertainty of approximately five model parameters, depending on prior uncertainties. Further analysis of the posterior PDF shows that almost all parameters are nearly Gaussian distributed, and reveals some distinct groups of parameters that are constrained together. We show that after assimilating only 7 days of measurements, uncertainties for net carbon uptake over 2 years for the forest site can be substantially reduced, with the median estimate in excellent agreement with measurements. [source] Model,data synthesis in terrestrial carbon observation: methods, data requirements and data uncertainty specificationsGLOBAL CHANGE BIOLOGY, Issue 3 2005M. R. Raupach Systematic, operational, long-term observations of the terrestrial carbon cycle (including its interactions with water, energy and nutrient cycles and ecosystem dynamics) are important for the prediction and management of climate, water resources, food resources, biodiversity and desertification. To contribute to these goals, a terrestrial carbon observing system requires the synthesis of several kinds of observation into terrestrial biosphere models encompassing the coupled cycles of carbon, water, energy and nutrients. Relevant observations include atmospheric composition (concentrations of CO2 and other gases); remote sensing; flux and process measurements from intensive study sites; in situ vegetation and soil monitoring; weather, climate and hydrological data; and contemporary and historical data on land use, land use change and disturbance (grazing, harvest, clearing, fire). A review of model,data synthesis tools for terrestrial carbon observation identifies ,nonsequential' and ,sequential' approaches as major categories, differing according to whether data are treated all at once or sequentially. The structure underlying both approaches is reviewed, highlighting several basic commonalities in formalism and data requirements. An essential commonality is that for all model,data synthesis problems, both nonsequential and sequential, data uncertainties are as important as data values themselves and have a comparable role in determining the outcome. Given the importance of data uncertainties, there is an urgent need for soundly based uncertainty characterizations for the main kinds of data used in terrestrial carbon observation. The first requirement is a specification of the main properties of the error covariance matrix. As a step towards this goal, semi-quantitative estimates are made of the main properties of the error covariance matrix for four kinds of data essential for terrestrial carbon observation: remote sensing of land surface properties, atmospheric composition measurements, direct flux measurements, and measurements of carbon stores. [source] Fire history and the global carbon budget: a 1°× 1° fire history reconstruction for the 20th centuryGLOBAL CHANGE BIOLOGY, Issue 3 2005Florent Mouillot Abstract A yearly global fire history is a prerequisite for quantifying the contribution of previous fires to the past and present global carbon budget. Vegetation fires can have both direct (combustion) and long-term indirect effects on the carbon cycle. Every fire influences the ecosystem carbon budget for many years, as a consequence of internal reorganization, decomposition of dead biomass, and regrowth. We used a two-step process to estimate these effects. First we synthesized the available data available for the 1980s or 1990s to produce a global fire map. For regions with no data, we developed estimates based on vegetation type and history. Second, we then worked backwards to reconstruct the fire history. This reconstruction was based on published data when available. Where it was not, we extrapolated from land use practices, qualitative reports and local studies, such as tree ring analysis. The resulting product is intended as a first approximation for questions about consequences of historical changes in fire for the global carbon budget. We estimate that an average of 608 Mha yr,1 burned (not including agricultural fires) at the end of the 20th century. 86% of this occurred in tropical savannas. Fires in forests with higher carbon stocks consumed 70.7 Mha yr,1 at the beginning of the century, mostly in the boreal and temperate forests of the Northern Hemisphere. This decreased to 15.2 Mha yr,1 in the 1960s as a consequence of fire suppression policies and the development of efficient fire fighting equipment. Since then, fires in temperate and boreal forests have decreased to 11.2 Mha yr,1. At the same time, burned areas increased exponentially in tropical forests, reaching 54 Mha yr,1 in the 1990s, reflecting the use of fire in deforestation for expansion of agriculture. There is some evidence for an increase in area burned in temperate and boreal forests in the closing years of the 20th century. [source] Increased rainfall variability and reduced rainfall amount decreases soil CO2 flux in a grassland ecosystemGLOBAL CHANGE BIOLOGY, Issue 2 2005Christopher W. Harper Abstract Predicted climate changes in the US Central Plains include altered precipitation regimes with increased occurrence of growing season droughts and higher frequencies of extreme rainfall events. Changes in the amounts and timing of rainfall events will likely affect ecosystem processes, including those that control C cycling and storage. Soil carbon dioxide (CO2) flux is an important component of C cycling in terrestrial ecosystems, and is strongly influenced by climate. While many studies have assessed the influence of soil water content on soil CO2 flux, few have included experimental manipulation of rainfall amounts in intact ecosystems, and we know of no studies that have explicitly addressed the influence of the timing of rainfall events. In order to determine the responses of soil CO2 flux to altered rainfall timing and amounts, we manipulated rainfall inputs to plots of native tallgrass prairie (Konza Prairie, Kansas, USA) over four growing seasons (1998,2001). Specifically, we altered the amounts and/or timing of growing season rainfall in a factorial combination that included two levels of rainfall amount (100% or 70% of naturally occurring rainfall quantity) and two temporal patterns of rain events (ambient timing or a 50% increase in length of dry intervals between events). The size of individual rain events in the altered timing treatment was adjusted so that the quantity of total growing season rainfall in the ambient and altered timing treatments was the same (i.e. fewer, but larger rainfall events characterized the altered timing treatment). Seasonal mean soil CO2 flux decreased by 8% under reduced rainfall amounts, by 13% under altered rainfall timing, and by 20% when both were combined (P<0.01). These changes in soil CO2 flux were consistent with observed changes in plant productivity, which was also reduced by both reduced rainfall quantity and altered rainfall timing. Soil CO2 flux was related to both soil temperature and soil water content in regression analyses; together they explained as much as 64% of the variability in CO2 flux across dates under ambient rainfall timing, but only 38,48% of the variability under altered rainfall timing, suggesting that other factors (e.g. substrate availability, plant or microbial stress) may limit CO2 flux under a climate regime that includes fewer, larger rainfall events. An analysis of the temperature sensitivity of soil CO2 flux indicated that temperature had a reduced effect (lower correlation and lower Q10 values) under the reduced quantity and altered timing treatments. Recognition that changes in the timing of rainfall events may be as, or more, important than changes in rainfall amount in affecting soil CO2 flux and other components of the carbon cycle highlights the complex nature of ecosystem responses to climate change in North American grasslands. [source] Global climate change and soil carbon stocks; predictions from two contrasting models for the turnover of organic carbon in soilGLOBAL CHANGE BIOLOGY, Issue 1 2005Chris Jones Abstract Enhanced release of CO2 to the atmosphere from soil organic carbon as a result of increased temperatures may lead to a positive feedback between climate change and the carbon cycle, resulting in much higher CO2 levels and accelerated global warming. However, the magnitude of this effect is uncertain and critically dependent on how the decomposition of soil organic C (heterotrophic respiration) responds to changes in climate. Previous studies with the Hadley Centre's coupled climate,carbon cycle general circulation model (GCM) (HadCM3LC) used a simple, single-pool soil carbon model to simulate the response. Here we present results from numerical simulations that use the more sophisticated ,RothC' multipool soil carbon model, driven with the same climate data. The results show strong similarities in the behaviour of the two models, although RothC tends to simulate slightly smaller changes in global soil carbon stocks for the same forcing. RothC simulates global soil carbon stocks decreasing by 54 Gt C by 2100 in a climate change simulation compared with an 80 Gt C decrease in HadCM3LC. The multipool carbon dynamics of RothC cause it to exhibit a slower magnitude of transient response to both increased organic carbon inputs and changes in climate. We conclude that the projection of a positive feedback between climate and carbon cycle is robust, but the magnitude of the feedback is dependent on the structure of the soil carbon model. [source] The response of two Glomus mycorrhizal fungi and a fine endophyte to elevated atmospheric CO2, soil warming and droughtGLOBAL CHANGE BIOLOGY, Issue 11 2004Philip L. Staddon Abstract Plantago lanceolata plants were grown under various environmental conditions in association with the mycorrhizal fungi Glomus mosseae, G. caledonium and a fine endophyte either individually or all together. Using a time-course approach, we investigated the effects of elevated atmospheric CO2 (eCO2), soil warming and drought and their interactions on root length colonized (RLC) by mycorrhizal fungi and extraradical mycorrhizal hyphal (EMH) production. Plant growth responded as would be expected to the environmental manipulations. There was no plant growth-independent effect of eCO2 on mycorrhizal colonization; however, EMH production was stimulated by eCO2, i.e. there was increased partitioning of below-ground carbon to the EMH. Soil warming directly stimulated both percent RLC by the Glomus species and EMH density; soil warming did not affect RLC by the fine endophyte. Drought decreased percent RLC for the fine endophyte, but not for the Glomus species. The presence of one mycorrhizal fungus did not affect the response of another to the environmental variables. There was no evidence of any interactive effects of the environmental variables on RLC, but there were significant environmental interactions on EMH production. In particular, the stimulatory effects of eCO2 and soil warming on EMH density were not additive. The results are discussed in terms of the soil carbon cycle, highlighting some crucial gaps in our knowledge. If future environmental changes affect mycorrhizal fungal turnover and respiration, then this could have important implications for the terrestrial carbon cycle. [source] Estimating soil carbon fluxes following land-cover change: a test of some critical assumptions for a region in Costa RicaGLOBAL CHANGE BIOLOGY, Issue 2 2004Jennifer S. Powers Abstract Changes in soil carbon storage that accompany land-cover change may have significant effects on the global carbon cycle. The objective of this work was to examine how assumptions about preconversion soil C storage and the effects of land-cover change influence estimates of regional soil C storage. We applied three models of land-cover change effects to two maps of preconversion soil C in a 140 000 ha area of northeastern Costa Rica. One preconversion soil C map was generated using values assigned to tropical wet forest from the literature, the second used values obtained from extensive field sampling. The first model of land-cover change effects used values that are typically applied in global assessments, the second and third models used field data but differed in how the data were aggregated (one was based on land-cover transitions and one was based on terrain attributes). Changes in regional soil C storage were estimated for each combination of model and preconversion soil C for three time periods defined by geo-referenced land-cover maps. The estimated regional soil C under forest vegetation (to 0.3 m) was higher in the map based on field data (10.03 Tg C) than in the map based on literature data (8.90 Tg C), although the range of values derived from propagating estimation errors was large (7.67,12.40 Tg C). Regional soil C storage declined through time due to forest clearing for pasture and crops. Estimated CO2 fluxes depended more on the model of land-cover change effects than on preconversion soil C. Cumulative soil C losses (1950,1996) under the literature model of land-cover effects exceeded estimates based on field data by factors of 3.8,8.0. In order to better constrain regional and global-scale assessments of carbon fluxes from soils in the tropics, future research should focus on methods for extrapolating regional-scale constraints on soil C dynamics to larger spatial and temporal scales. [source] Net primary productivity mapped for Canada at 1-km resolutionGLOBAL ECOLOGY, Issue 2 2002J Liu Abstract Aim To map net primary productivity (NPP) over the Canadian landmass at 1-km resolution. Location Canada. Methods A simulation model, the Boreal Ecosystem Productivity Simulator (BEPS), has been developed. The model uses a sunlit and shaded leaf separation strategy and a daily integration scheme in order to implement an instantaneous leaf-level photosynthesis model over large areas. Two key driving variables, leaf area index (every 10 days) and land cover type (annual), are derived from satellite measurements of the Advanced Very High Resolution Radiometer (AVHRR). Other spatially explicit input data are also prepared, including daily meteorological data (radiation, precipitation, temperature, and humidity), available soil water holding capacity (AWC) and forest biomass. The model outputs are compared with ground plot data to ensure that no significant systematic biases are created. Results The simulation results show that Canada's annual net primary production was 1.22 Gt C year,1 in 1994, 78% attributed to forests, mainly the boreal forest, without considering the contribution of the understorey. The NPP averaged over the entire landmass was ~140 g C m,2 year,1 in 1994. Geographically, NPP varied greatly among ecozones and provinces/territories. The seasonality of NPP is characterized by strong summer photosynthesis capacities and a short growing season in northern ecosystems. Conclusions This study is the first attempt to simulate Canada-wide NPP with a process-based model at 1-km resolution and using a daily step. The statistics of NPP are therefore expected to be more accurate than previous analyses at coarser spatial or temporal resolutions. The use of remote sensing data makes such simulations possible. BEPS is capable of integrating the effects of climate, vegetation, and soil on plant growth at a regional scale. BEPS and its parameterization scheme and products can be a basis for future studies of the carbon cycle in mid-high latitude ecosystems. [source] Key Issues Concerning Biolog Use for Aerobic and Anaerobic Freshwater Bacterial Community-Level Physiological ProfilingINTERNATIONAL REVIEW OF HYDROBIOLOGY, Issue 3 2006Bradley W. Christian Abstract Bacterial heterotrophy in aquatic ecosystems is important in the overall carbon cycle. Biolog MicroPlates provide information into the metabolic potential of bacteria involved in carbon cycling. Specifically, Biolog EcoPlatesÔ were developed with ecologically relevant carbon substrates to allow investigators to measure carbon substrate utilization patterns and develop community-level physiological profiles from natural bacterial assemblages. However, understanding of the functionality of these plates in freshwater research is limited. We explored several issues of EcoPlate use for freshwater bacterial assemblages including inoculum density, incubation temperature, non-bacterial color development, and substrate selectivity. Each of these has various effects on plate interpretation. We offer suggestions and techniques to resolve these interpretation issues. Lastly we propose a technique to allow EcoPlate use in anaerobic freshwater bacterial studies. (© 2006 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim) [source] Introductory perspective on the COREF ProjectISLAND ARC, Issue 4 2006Yasufumi Iryu Abstract Coral reefs are tropic to subtropic, coastal ecosystems comprising very diverse organisms. Late Quaternary reef deposits are fossil archives of environmental, tectonic and eustatic variations that can be used to reconstruct the paleoclimatic and paleoceanographic history of the tropic surface oceans. Reefs located at the latitudinal limits of coral-reef ecosystems (i.e. those at coral-reef fronts) are particularly sensitive to environmental changes , especially those associated with glacial,interglacial changes in climate and sealevel. We propose a land and ocean scientific drilling campaign in the Ryukyu Islands (the Ryukyus) in the northwestern Pacific Ocean to investigate the dynamic response of the corals and coral-reef ecosystems in this region to Late Quaternary climate and sealevel change. Such a drilling campaign, which we call the COREF (coral-reef front) Project, will allow the following three major questions to be evaluated: (i) What are the nature, magnitude and driving mechanisms of coral-reef front migration in the Ryukyus? (ii) What is the ecosystem response of coral reefs in the Ryukyus to Quaternary climate changes? (iii) What is the role of coral reefs in the global carbon cycle? Subsidiary objectives include (i) the timing of coral-reef initiation in the Ryukyus and its causes; (ii) the position of the Kuroshio current during glacial periods and its effects on coral-reef formation; and (iii) early carbonate diagenetic responses as a function of compounded variations in climate, eustacy and depositional mineralogies (subtropic aragonitic to warm-temperate calcitic). The geographic, climatic and oceanographic settings of the Ryukyu Islands provide an ideal natural laboratory to address each of these research questions. [source] Plant,soil interactions and the carbon cycleJOURNAL OF ECOLOGY, Issue 5 2009Richard D. Bardgett No abstract is available for this article. [source] Darkness visible: reflections on underground ecologyJOURNAL OF ECOLOGY, Issue 2 2005A. H. FITTER Summary 1Soil science and ecology have developed independently, making it difficult for ecologists to contribute to urgent current debates on the destruction of the global soil resource and its key role in the global carbon cycle. Soils are believed to be exceptionally biodiverse parts of ecosystems, a view confirmed by recent data from the UK Soil Biodiversity Programme at Sourhope, Scotland, where high diversity was a characteristic of small organisms, but not of larger ones. Explaining this difference requires knowledge that we currently lack about the basic biology and biogeography of micro-organisms. 2It seems inherently plausible that the high levels of biological diversity in soil play some part in determining the ability of soils to undertake ecosystem-level processes, such as carbon and mineral cycling. However, we lack conceptual models to address this issue, and debate about the role of biodiversity in ecosystem processes has centred around the concept of functional redundancy, and has consequently been largely semantic. More precise construction of our experimental questions is needed to advance understanding. 3These issues are well illustrated by the fungi that form arbuscular mycorrhizas, the Glomeromycota. This ancient symbiosis of plants and fungi is responsible for phosphate uptake in most land plants, and the phylum is generally held to be species-poor and non-specific, with most members readily colonizing any plant species. Molecular techniques have shown both those assumptions to be unsafe, raising questions about what factors have promoted diversification in these fungi. One source of this genetic diversity may be functional diversity. 4Specificity of the mycorrhizal interaction between plants and fungi would have important ecosystem consequences. One example would be in the control of invasiveness in introduced plant species: surprisingly, naturalized plant species in Britain are disproportionately from mycorrhizal families, suggesting that these fungi may play a role in assisting invasion. 5What emerges from an attempt to relate biodiversity and ecosystem processes in soil is our extraordinary ignorance about the organisms involved. There are fundamental questions that are now answerable with new techniques and sufficient will, such as how biodiverse are natural soils? Do microbes have biogeography? Are there rare or even endangered microbes? [source] ,Forbidden zone' subduction of sediments to 150 km depth, the reaction of dolomite to magnesite + aragonite in the UHPM metapelites from western Tianshan, ChinaJOURNAL OF METAMORPHIC GEOLOGY, Issue 6 2003L. Zhang Abstract The solid-state reaction magnesite (MgCO3) + calcite (aragonite) (CaCO3) = dolomite (CaMg(CO3)2) has been identified in metapelites from western Tianshan, China. Petrological studies show that two metamorphic stages are recorded in the metapelites: (1) the peak mineral assemblage of magnesite and calcite pseudomorphs after aragonite which is only preserved as inclusions within dolomite; and (2) the retrograde glaucophane-chloritoid facies mineral assemblage of glaucophane, chloritoid, dolomite, garnet, paragonite, chlorite and quartz. The peak metamorphic temperatures and pressures are calculated to be 560,600 °C, 4.95,5.07 GPa based on the calcite,dolomite geothermometer and the equilibrium calculation of the reaction dolomite = magnesite + aragonite, respectively. These give direct evidence in UHP metamorphic rocks from Tianshan, China, that carbonate sediments were subducted to greater than 150 km depth. This UHP metamorphism represents a geotherm lower than any previously estimated for subduction metamorphism (< 3.7 °C km,1) and is within what was previously considered a ,forbidden' condition within Earth. In terms of the carbon cycle, this demonstrates that carbonate sediments can be subducted to at least 150 km depth without releasing significant CO2 to the overlying mantle wedge. [source] | ||||||||||||||||