|
| ||
|
|
||
C Cycling (c + cycling)
Selected AbstractsGeoChip-based analysis of functional microbial communities during the reoxidation of a bioreduced uranium-contaminated aquiferENVIRONMENTAL MICROBIOLOGY, Issue 10 2009Joy D. Van Nostrand Summary A pilot-scale system was established for in situ biostimulation of U(VI) reduction by ethanol addition at the US Department of Energy's (DOE's) Field Research Center (Oak Ridge, TN). After achieving U(VI) reduction, stability of the bioreduced U(IV) was evaluated under conditions of (i) resting (no ethanol injection), (ii) reoxidation by introducing dissolved oxygen (DO), and (iii) reinjection of ethanol. GeoChip, a functional gene array with probes for N, S and C cycling, metal resistance and contaminant degradation genes, was used for monitoring groundwater microbial communities. High diversity of all major functional groups was observed during all experimental phases. The microbial community was extremely responsive to ethanol, showing a substantial change in community structure with increased gene number and diversity after ethanol injections resumed. While gene numbers showed considerable variations, the relative abundance (i.e. percentage of each gene category) of most gene groups changed little. During the reoxidation period, U(VI) increased, suggesting reoxidation of reduced U(IV). However, when introduction of DO was stopped, U(VI) reduction resumed and returned to pre-reoxidation levels. These findings suggest that the community in this system can be stimulated and that the ability to reduce U(VI) can be maintained by the addition of electron donors. This biostimulation approach may potentially offer an effective means for the bioremediation of U(VI)-contaminated sites. [source] Below-ground carbon flux and partitioning: global patterns and response to temperatureFUNCTIONAL ECOLOGY, Issue 6 2008C. M. Litton Summary 1The fraction of gross primary production (GPP) that is total below-ground carbon flux (TBCF) and the fraction of TBCF that is below-ground net primary production (BNPP) represent globally significant C fluxes that are fundamental in regulating ecosystem C balance. However, global estimates of the partitioning of GPP to TBCF and of TBCF to BNPP, as well as the absolute size of these fluxes, remain highly uncertain. 2Efforts to model below-ground processes are hindered by methodological difficulties for estimating below-ground C cycling, the complexity of below-ground interactions, and an incomplete understanding of the response of GPP, TBCF and BNPP to climate change. Due to a paucity of available data, many terrestrial ecosystem models and ecosystem-level studies of whole stand C use efficiency rely on assumptions that: (i) C allocation patterns across large geographic, climatic and taxonomic scales are fixed; and (ii) c. 50% of TBCF is BNPP. 3Here, we examine available information on GPP, TBCF, BNPP, TBCF : GPP and BNPP : TBCF from a diverse global data base of forest ecosystems to understand patterns in below-ground C flux and partitioning, and their response to mean annual temperature (MAT). 4MAT and mean annual precipitation (MAP) covaried strongly across the global forest data base (37 mm increase in MAP for every 1 °C increase in MAT). In all analyses, however, MAT was the most important variable explaining observed patterns in below-ground C processes. 5GPP, TBCF and BNPP all increased linearly across the global scale range of MAT. TBCF : GPP increased significantly with MAT for temperate and tropical ecosystems (> 5 °C), but variability was high across the data set. BNPP : TBCF varied from 0·26 to 0·53 across the entire MAT gradient (,5 to 30 °C), with a much narrower range of 0·42 to 0·53 for temperate and tropical ecosystems (5 to 30 °C). 6Variability in the data sets was moderate and clear exceptions to the general patterns exist that likely relate to other factors important for determining below-ground C flux and partitioning, in particular water availability and nutrient supply. Still, our results highlight global patterns in below-ground C flux and partitioning in forests in response to MAT that in part confirm previously held assumptions. [source] Quantifying root lateral distribution and turnover using pine trees with a distinct stable carbon isotope signatureFUNCTIONAL ECOLOGY, Issue 1 2005K. JOHNSEN Summary 1In order to help assess spatial competition for below-ground resources, we quantified the effects of fertilization on root biomass quantity and lateral root distribution of mid-rotation Pinus taeda trees. Open-top chambers exposed trees to ambient or ambient plus 200 µmol mol,1 atmospheric CO2 for 31 months. 2Tank CO2 was depleted in atmospheric 13C; foliage of elevated CO2 trees had ,13C of ,42·9, compared with ,29·1 for ambient CO2 trees. 3Roots 1 m from the base of elevated CO2 -grown trees had more negative ,13C relative to control trees, and this difference was detected, on average, up to 5·8, 3·7 and 3·7 m away from the trees for 0,2, 2,5 and >5 mm root-size classes, respectively. Non-fertilized tree roots extended as far as fertilized trees despite the fact that their above-ground biomass was less than half that of fertilized trees. 4These results are informative with respect to root sampling intensity and protocol, and the distances required between experimental manipulations to evaluate below-ground processes of independent treatments. 5Fine-root turnover has usually been estimated to range from weeks to 3 years, representing a major avenue of carbon flux. Using a mixing model we calculated that 0,2 mm roots had a mean residence time of 4·5 years indicating relatively slow fine-root turnover, a result that has major implications in modelling C cycling. [source] The response of heterotrophic activity and carbon cycling to nitrogen additions and warming in two tropical soilsGLOBAL CHANGE BIOLOGY, Issue 9 2010DANIELA F. CUSACK Abstract Nitrogen (N) deposition is projected to increase significantly in tropical regions in the coming decades, where changes in climate are also expected. Additional N and warming each have the potential to alter soil carbon (C) storage via changes in microbial activity and decomposition, but little is known about the combined effects of these global change factors in tropical ecosystems. In this study, we used controlled laboratory incubations of soils from a long-term N fertilization experiment to explore the sensitivity of soil C to increased N in two N-rich tropical forests. We found that fertilization corresponded to significant increases in bulk soil C concentrations, and decreases in C loss via heterotrophic respiration (P< 0.05). The increase in soil C was not uniform among C pools, however. The active soil C pool decomposed faster with fertilization, while slowly cycling C pools had longer turnover times. These changes in soil C cycling with N additions corresponded to the responses of two groups of microbial extracellular enzymes. Smaller active C pools corresponded to increased hydrolytic enzyme activities; longer turnover times of the slowly cycling C pool corresponded to reduced activity of oxidative enzymes, which degrade more complex C compounds, in fertilized soils. Warming increased soil respiration overall, and N fertilization significantly increased the temperature sensitivity of slowly cycling C pools in both forests. In the lower elevation forest, respired CO2 from fertilized cores had significantly higher ,14C values than control soils, indicating losses of relatively older soil C. These results indicate that soil C storage is sensitive to both N deposition and warming in N-rich tropical soils, with interacting effects of these two global change factors. N deposition has the potential to increase total soil C stocks in tropical forests, but the long-term stability of this added C will likely depend on future changes in temperature. [source] Increased temperature and precipitation interact to affect root production, mortality, and turnover in a temperate steppe: implications for ecosystem C cyclingGLOBAL CHANGE BIOLOGY, Issue 4 2010WENMING BAI Abstract Fine root production and turnover play important roles in regulating carbon (C) cycling in terrestrial ecosystems. In order to examine effects of climate change on root production and turnover, a field experiment with increased temperature and precipitation had been conducted in a semiarid temperate steppe in northern China since April 2005. Experimental warming decreased annual root production, mortality, and mean standing crop by 10.3%, 12.1%, 7.0%, respectively, while root turnover was not affected in 2006 and 2007 by the warming. Annual root production and turnover was 5.9% and 10.3% greater in the elevated than ambient precipitation plots. Changes in root production and mortality in response to increased temperature and precipitation could be largely attributed to the changes in gross ecosystem productivity (GEP) and belowground/aboveground C allocation. There were significant interactive effects of warming and increased precipitation on root productivity, mortality, and standing crop. Experimental warming had positive and negative effects on the three root variables (root production, mortality, standing crop) under ambient and increased precipitation, respectively. Increased precipitation stimulated and suppressed the three root variables in the unwarmed and warmed subplots, respectively. The positive dependence of soil respiration and ecosystem respiration upon root productivity and mortality highlights the important role of root dynamics in ecosystem C cycling. The nonadditive effects of increased temperature and precipitation on root productivity, mortality, and standing crop observed in this study are critical for model projections of climate,ecosystem feedbacks. These findings indicate that carbon allocation is a focal point for future research and that results from single factor experiments should be treated with caution because of factor interactions. [source] Indirect effects of soil moisture reverse soil C sequestration responses of a spring wheat agroecosystem to elevated CO2GLOBAL CHANGE BIOLOGY, Issue 1 2010SVEN MARHAN Abstract Increased plant productivity under elevated atmospheric CO2 concentrations might increase soil carbon (C) inputs and storage, which would constitute an important negative feedback on the ongoing atmospheric CO2 rise. However, elevated CO2 often also leads to increased soil moisture, which could accelerate the decomposition of soil organic matter, thus counteracting the positive effects via C cycling. We investigated soil C sequestration responses to 5 years of elevated CO2 treatment in a temperate spring wheat agroecosystem. The application of 13C-depleted CO2 to the elevated CO2 plots enabled us to partition soil C into recently fixed C (Cnew) and pre-experimental C (Cold) by 13C/12C mass balance. Gross C inputs to soils associated with Cnew accumulation and the decomposition of Cold were then simulated using the Rothamsted C model ,RothC.' We also ran simulations with a modified RothC version that was driven directly by measured soil moisture and temperature data instead of the original water balance equation that required potential evaporation and precipitation as input. The model accurately reproduced the measured Cnew in bulk soil and microbial biomass C. Assuming equal soil moisture in both ambient and elevated CO2, simulation results indicated that elevated CO2 soils accumulated an extra ,40,50 g C m,2 relative to ambient CO2 soils over the 5 year treatment period. However, when accounting for the increased soil moisture under elevated CO2 that we observed, a faster decomposition of Cold resulted; this extra C loss under elevated CO2 resulted in a negative net effect on total soil C of ,30 g C m,2 relative to ambient conditions. The present study therefore demonstrates that positive effects of elevated CO2 on soil C due to extra soil C inputs can be more than compensated by negative effects of elevated CO2 via the hydrological cycle. [source] Effects of soil frost on soil respiration and its radiocarbon signature in a Norway spruce forest soilGLOBAL CHANGE BIOLOGY, Issue 4 2009JAN MUHR Abstract Apart from a general increase of mean annual air temperature, climate models predict a regional increase of the frequency and intensity of soil frost with possibly strong effects on C cycling of soils. In this study, we induced mild soil frost (up to ,5 °C in a depth of 5 cm below surface) in a Norway spruce forest soil by removing the natural snow cover in the winter of 2005/2006. Soil frost lasted from January to April 2006 and was detected down to 15 cm depth. Soil frost effectively reduced soil respiration in the snow removal plots in comparison to undisturbed control plots. On an annual basis 6.2 t C ha,1 a,1 were emitted in the control plots compared with 5.1 t C ha,1 a,1 in the snow removal plots. Only 14% of this difference was attributed to reduced soil respiration during the soil frost period itself, whereas 63% of this difference originated from differences during the summer of 2006. Radiocarbon (,14C) signature of CO2 revealed a considerable reduction of heterotrophic respiration on the snow removal plots, only partly compensated for by a slight increase of rhizosphere respiration. Similar CO2 concentrations in the uppermost mineral horizons of both treatments indicate that differences between the treatments originated from the organic horizons. Extremely low water contents between June and October of 2006 may have inhibited the recovery of the heterotrophic organisms from the frost period, thereby enhancing the differences between the control and snow removal plots. We conclude that soil frost triggered a change in the composition of the microbial community, leading to an increased sensitivity of heterotrophic respiration to summer drought. A CO2 pulse during thawing, such as described for arable soils several times throughout the literature, with the potential to partly compensate for reduced soil respiration during soil frost, appears to be lacking for this soil. Our results from this experiment indicate that soil frost reduces C emission from forest soils, whereas mild winters may enhance C losses from forest soils. [source] Decline in a dominant invertebrate species contributes to altered carbon cycling in a low-diversity soil ecosystemGLOBAL CHANGE BIOLOGY, Issue 8 2008J. E. BARRETT Abstract Low-diversity ecosystems cover large portions of the Earth's land surface, yet studies of climate change on ecosystem functioning typically focus on temperate ecosystems, where diversity is high and the effects of individual species on ecosystem functioning are difficult to determine. We show that a climate-induced decline of an invertebrate species in a low-diversity ecosystem could contribute to significant changes in carbon (C) cycling. Recent climate variability in the McMurdo Dry Valleys of Antarctica is associated with changes in hydrology, biological productivity, and community composition of terrestrial and aquatic ecosystems. One of the greatest changes documented in the dry valleys is a 65% decrease in the abundance of the dominant soil invertebrate (Scottnema lindsayae, Nematoda) between 1993 and 2005, illustrating sensitivity of biota in this ecosystem to small changes in temperature. Globally, such declines are expected to have significant influences over ecosystem processes such as C cycling. To determine the implications of this climate-induced decline in nematode abundance on soil C cycling we followed the fate of a 13C tracer added to soils in Taylor Valley, Antarctica. Carbon assimilation by the dry valley nematode community contributed significantly to soil C cycling (2,7% of the heterotrophic C flux). Thus, the influence of a climate-induced decline in abundance of a dominant species may have a significant effect on ecosystem functioning in a low-diversity ecosystem. [source] The sensitivity of annual grassland carbon cycling to the quantity and timing of rainfallGLOBAL CHANGE BIOLOGY, Issue 6 2008WENDY W. CHOU Abstract Global climate models predict significant changes to the rainfall regimes of the grassland biome, where C cycling is particularly sensitive to the amount and timing of precipitation. We explored the effects of both natural interannual rainfall variability and experimental rainfall additions on net C storage and loss in annual grasslands. Soil respiration and net primary productivity (NPP) were measured in treatment and control plots over four growing seasons (water years, or WYs) that varied in wet-season length and the quantity of rainfall. In treatment plots, we increased total rainfall by 50% above ambient levels and simulated one early- and one late-season storm. The early- and late-season rain events significantly increased soil respiration for 2,4 weeks after wetting, while augmentation of wet-season rainfall had no significant effect. Interannual variability in precipitation had large and significant effects on C cycling. We observed a significant positive relationship between annual rainfall and aboveground NPP across the study (P=0.01, r2=0.69). Changes in the seasonal timing of rainfall significantly affected soil respiration. Abundant rainfall late in the wet season in WY 2004, a year with average total rainfall, led to greater net ecosystem C losses due to a ,50% increase in soil respiration relative to other years. Our results suggest that C cycling in annual grasslands will be less sensitive to changes in rainfall quantity and more affected by altered seasonal timing of rainfall, with a longer or later wet season resulting in significant C losses from annual grasslands. [source] A non-native invasive grass increases soil carbon flux in a Hawaiian tropical dry forestGLOBAL CHANGE BIOLOGY, Issue 4 2008CREIGHTON M. LITTON Abstract Non-native plants are invading terrestrial ecosystems across the globe, yet little is known about how invasions impact carbon (C) cycling or how these impacts will be influenced by climate change. We quantified the effect of a non-native C4 grass invasion on soil C pools and fluxes in a Hawaiian tropical dry forest over 2 years in which annual precipitation was average (Year 1) and ,60% higher than average (Year 2). Work was conducted in a series of forested plots where the grass understory was completely removed (removal plots) or left intact (grass plots) for 3 years before experiment initiation. We hypothesized that grass invasion would: (i) not change total soil C pools, (ii) increase the flux of C into and out of soils, and (iii) increase the sensitivity of soil C flux to variability in precipitation. In grass plots, grasses accounted for 25,34% of litter layer C and ,70% of fine root C. However, no differences were observed between treatments in the size of any soil C pools. Moreover, grass-derived C constituted a negligible fraction of the large mineral soil C pool (< 3%) despite being present in the system for ,50 years. Tree litterfall was ,45% lower in grass plots, but grass-derived litterfall more than compensated for this reduction in both years. Annual cumulative soil-surface CO2 efflux (Rsoil) was ,40% higher in grass plots in both years, and increased in both treatments by ,36% in the wetter Year 2. Despite minimal grass-derived mineral soil C, > 75% of Rsoil in grass plots was of C4 (i.e. grass) origin. These results demonstrate that grass invasion in forest ecosystems can increase the flux of C into and out of soils without changing total C pools, at least over the short term and as long as the native tree canopy remains intact, and that invasion-mediated changes in belowground C cycling are sensitive to precipitation. [source] Increased rainfall variability and reduced rainfall amount decreases soil CO2 flux in a grassland ecosystemGLOBAL CHANGE BIOLOGY, Issue 2 2005Christopher W. Harper Abstract Predicted climate changes in the US Central Plains include altered precipitation regimes with increased occurrence of growing season droughts and higher frequencies of extreme rainfall events. Changes in the amounts and timing of rainfall events will likely affect ecosystem processes, including those that control C cycling and storage. Soil carbon dioxide (CO2) flux is an important component of C cycling in terrestrial ecosystems, and is strongly influenced by climate. While many studies have assessed the influence of soil water content on soil CO2 flux, few have included experimental manipulation of rainfall amounts in intact ecosystems, and we know of no studies that have explicitly addressed the influence of the timing of rainfall events. In order to determine the responses of soil CO2 flux to altered rainfall timing and amounts, we manipulated rainfall inputs to plots of native tallgrass prairie (Konza Prairie, Kansas, USA) over four growing seasons (1998,2001). Specifically, we altered the amounts and/or timing of growing season rainfall in a factorial combination that included two levels of rainfall amount (100% or 70% of naturally occurring rainfall quantity) and two temporal patterns of rain events (ambient timing or a 50% increase in length of dry intervals between events). The size of individual rain events in the altered timing treatment was adjusted so that the quantity of total growing season rainfall in the ambient and altered timing treatments was the same (i.e. fewer, but larger rainfall events characterized the altered timing treatment). Seasonal mean soil CO2 flux decreased by 8% under reduced rainfall amounts, by 13% under altered rainfall timing, and by 20% when both were combined (P<0.01). These changes in soil CO2 flux were consistent with observed changes in plant productivity, which was also reduced by both reduced rainfall quantity and altered rainfall timing. Soil CO2 flux was related to both soil temperature and soil water content in regression analyses; together they explained as much as 64% of the variability in CO2 flux across dates under ambient rainfall timing, but only 38,48% of the variability under altered rainfall timing, suggesting that other factors (e.g. substrate availability, plant or microbial stress) may limit CO2 flux under a climate regime that includes fewer, larger rainfall events. An analysis of the temperature sensitivity of soil CO2 flux indicated that temperature had a reduced effect (lower correlation and lower Q10 values) under the reduced quantity and altered timing treatments. Recognition that changes in the timing of rainfall events may be as, or more, important than changes in rainfall amount in affecting soil CO2 flux and other components of the carbon cycle highlights the complex nature of ecosystem responses to climate change in North American grasslands. [source] Tree root and soil heterotrophic respiration as revealed by girdling of boreal Scots pine forest: extending observations beyond the first yearPLANT CELL & ENVIRONMENT, Issue 8 2003BHUPINDERPAL-SINGH ABSTRACT Limitations in available techniques to separate autotrophic (root) and soil heterotrophic respiration have hampered the understanding of forest C cycling. The former is here defined as respiration by roots, their associated mycorrhizal fungi and other micro-organisms in the rhizosphere directly dependent on labile C compounds leaked from roots. In order to separate the autotrophic and heterotrophic components of soil respiration, all Scots pine trees in 900 m2 plots were girdled to instantaneously terminate the supply of current photosynthates from the tree canopy to roots. Högberg et al. (Nature 411, 789,792, 2001) reported that autotrophic activity contributed up to 56% of total soil respiration during the first summer of this experiment. They also found that mobilization of stored starch (and likely also sugars) in roots after girdling caused an increased apparent heterotrophic respiration on girdled plots. Herein a transient increase in the ,13C of soil CO2 efflux after girdling, thought to be due to decomposition of 13C-enriched ectomycorrhizal mycelium and root starch and sugar reserves, is reported. In the second year after girdling, when starch reserves of girdled tree roots were exhausted, calculated root respiration increased up to 65% of total soil CO2 efflux. It is suggested that this estimate of its contribution to soil respiration is more precise than the previous based on one year of observation. Heterotrophic respiration declined in response to a 20-day-long 6 °C decline in soil temperature during the second summer, whereas root respiration did not decline. This did not support the idea that root respiration should be more sensitive to variations in soil temperature. It is suggested that above-ground photosynthetic activity and allocation patterns of recent photosynthates to roots should be considered in models of responses of forest C balances to global climate change. [source] | ||||||||||